EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4526 contig Csv1_Contig4526:459..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.313e-27
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCS----TIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 348
            R A +T++V  AQ +A+   +         +V+AYEPVW+IGTG VATP QA+EVH  LRKW       E A   RIIYGGS NG+NC++L   P++DGFLVGGASLKPEF  +I
Sbjct:  135 RKANNTMEVNIAQLEALKKEIGESKKLWENVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFTTMI 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.652e-27
Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            + AG TL VV  Q  A+   V   + +V+AYEPVWAIGTG  AT   AQ++H  +R +L      + A  TRI+YGGS NGAN      + DVDGFLVGGASLKPEF+DII S
Sbjct:  134 KKAGVTLKVVERQLDAVIAEVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHHSIRSYLAEKLGKDTAEKTRILYGGSANGANAGTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.652e-27
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCST----IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 348
            R A  T++V  AQ +A+   +         +V+AYEPVW+IGTG VATP QA+EVH  LRKW       E A   RIIYGGS NG+NC++L   P++DGFLVGGASLKPEF+ +I
Sbjct:  135 RKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPEFMTMI 249          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.381e-27
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPD 291
            R AG T  V   QTKAIAD+V   S +V+AYEPVWAIGTGK ATP QAQEVH  LRKW   N S +++A+ RI YGGSV  ANC+ELAA+PD
Sbjct:  115 REAGQTEAVCFRQTKAIADKVKDWSNVVVAYEPVWAIGTGKTATPEQAQEVHVALRKWFTDNVSADVSASIRIQYGGSVTAANCRELAAKPD 206          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_KLUMA (Triosephosphate isomerase OS=Kluyveromyces marxianus GN=TPI1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.640e-27
Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   25 GSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            G TL+VV  Q +A+ D+V   + +V+AYEPVWAIGTG  AT   AQ +H  +R++L    S + A   RI+YGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  137 GITLEVVQRQLQAVLDKVQDWTNVVVAYEPVWAIGTGLAATSDDAQAIHHSIREFLAKKLSKDTAEKIRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.259e-26
Identity = 57/108 (52.78%), Postives = 75/108 (69.44%), Query Frame = 1
Query:   31 TLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            TL VV  Q +A+ ++V   + +V+AYEPVWAIGTG  AT   AQ++H  +R++L    S ++A + RI+YGGS NG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  139 TLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPEFVDIINS 246          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.148e-26
Identity = 61/113 (53.98%), Postives = 75/113 (66.37%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKS 354
            + AG TLDVV +Q   +  ++   S +V+AYEPVWAIGTG  AT   AQ++H E+R +L      + A   RIIYGGSVNG N      + DVDGFLVGGASLKPEF+DII S
Sbjct:  134 KKAGKTLDVVRSQLDPVIAKIKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDGFLVGGASLKPEFVDIINS 245          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.805e-26
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPD 291
            R A  T  V   QTKAIAD+V   S +V+AYEPVWAIGTGK ATP QAQEVH  LRKW   N S ++++A RI YGGSV  ANC+ELAA+PD
Sbjct:  115 REAAKTEAVCFRQTKAIADKVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSSAIRIQYGGSVTAANCRELAAKPD 206          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.101e-25
Identity = 61/116 (52.59%), Postives = 77/116 (66.38%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRV-SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 357
            R + +T  +++ Q K  A       S IV+AYEPVWAIGTG VATP +AQ+ H  +RKW+    S ++A  T I+YGGSVN  NC  L+ Q D+DGFLVGGASL   +FI IIKSA
Sbjct:  137 RKSNNTEHILSEQLKDFASFTPEEWSKIVIAYEPVWAIGTGAVATPQEAQDTHVFIRKWISEKVSEDVAKKTSIMYGGSVNADNCHNLSKQSDIDGFLVGGASLVASDFIAIIKSA 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ANOME (Triosephosphate isomerase (Fragment) OS=Anopheles merus GN=Tpi PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.050e-25
Identity = 57/92 (61.96%), Postives = 65/92 (70.65%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPD 291
            R AG T  V   QTKAIA +V   S +V+AYEPVWAIGTGK ATP QAQEVH  LRKW   N S +++ A RI YGGSV  ANC+ELA +PD
Sbjct:  115 REAGQTEAVCFRQTKAIAAQVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSNAIRIQYGGSVTAANCRELAGKPD 206          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPI2_GIALA3.313e-2753.04Triosephosphate isomerase OS=Giardia lamblia PE=3 ... [more]
TPIS_CANGA5.652e-2753.10Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPI1_GIALA5.652e-2753.04Triosephosphate isomerase OS=Giardia lamblia PE=1 ... [more]
TPIS_AEDTO7.381e-2764.13Triosephosphate isomerase (Fragment) OS=Aedes togo... [more]
TPIS_KLUMA9.640e-2753.64Triosephosphate isomerase OS=Kluyveromyces marxian... [more]
TPIS_KLULA1.259e-2652.78Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_YARLI2.148e-2653.98Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_CULPI2.805e-2663.04Triosephosphate isomerase (Fragment) OS=Culex pipi... [more]
TPIS_DICDI3.101e-2552.59Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPIS_ANOME4.050e-2561.96Triosephosphate isomerase (Fragment) OS=Anopheles ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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