EY756590

Overview
NameEY756590
Unique NameEY756590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22
Identity = 62/117 (52.99%), Postives = 76/117 (64.96%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRV--SSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 357
            R AG T  VVA Q   +   +  S  + IV+AYEPVWAIGTGK ATPA AQEVH  LRK L A  + E A   RI+YGGS+   N KEL A  D+DG L+GGA+LK  +F+ I+ +A
Sbjct:  133 REAGQTDSVVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAKNA-EAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKAADFLAIVHAA 248          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22
Identity = 60/118 (50.85%), Postives = 76/118 (64.41%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSS--CSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            R +G T  VV  Q +     +++    ++V+AYEPVWAIGTGK ATP QAQEVH  +R  +      E+A   RI YGGSV  +N KEL   PD+DG L+GGASL  E F++IIKSAE
Sbjct:  135 RESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDIDGGLIGGASLNAEDFVEIIKSAE 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIAD-RVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R A    +VVAAQ  ++ D      S IVLAYEPVWAIGTGK A+PAQAQE+H  +R  +      EIA  T I+YGGS   +N KEL A PDVDG L+GGA+LK
Sbjct:  135 REANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIAD-RVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 327
            R A    +VVAAQ  ++ D      S IVLAYEPVWAIGTGK A+PAQAQE+H  +R  +      EIA  T I+YGGS   +N KEL A PDVDG L+GGA+LK
Sbjct:  135 REANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACTPJ (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 360
            AG T  V A Q  A+ D   V + +  V+AYEP+WAIGTGK ATPAQAQ VH  +R  + A  S  +A    I YGGSVN AN  EL  QPD+DG LVGGASLK P F  I+K+AE
Sbjct:  138 AGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAAK-SQAVADQVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKAPAFAVIVKAAE 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACTP7 (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 360
            AG T  V A Q  A+ D   V + +  V+AYEP+WAIGTGK ATPAQAQ VH  +R  + A  S  +A    I YGGSVN AN  EL  QPD+DG LVGGASLK P F  I+K+AE
Sbjct:  138 AGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAAK-SQAVADQVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKAPAFAVIVKAAE 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACTP2 (Triosephosphate isomerase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 360
            AG T  V A Q  A+ D   V + +  V+AYEP+WAIGTGK ATPAQAQ VH  +R  + A  S  +A    I YGGSVN AN  EL  QPD+DG LVGGASLK P F  I+K+AE
Sbjct:  138 AGQTEAVCAKQIDAVIDALGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHIAAK-SQAVADQVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKAPAFAVIVKAAE 252          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.457e-22
Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 1
Query:   22 AGSTLDVVAAQTKAI--ADRVSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 360
            AG T +V A Q  A+      S+   +V+AYEPVWAIGTGK ATPAQAQ VH  +R  + A    ++A    I YGGSVN AN  EL  QPD+DG LVGGASLK + F  I+K+AE
Sbjct:  136 AGKTEEVCARQIDAVLKTQGASAFEGVVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKVAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVIVKAAE 250          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_ACIAC (Triosephosphate isomerase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.457e-22
Identity = 63/116 (54.31%), Postives = 75/116 (64.66%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADRVSSC-STIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 357
            R AG T  VV  Q  A+      C S  V+AYEPVWAIGTG+ ATP QAQ+VH  LR  L A  + E A   R++YGGS+N AN   L AQPD+DG LVGGASLK  +F+ II +A
Sbjct:  137 REAGQTEAVVKRQLAAVIHLNGHCISETVVAYEPVWAIGTGRTATPEQAQQVHAVLRAQLAA--ASEHADRIRLLYGGSMNAANAAALLAQPDIDGGLVGGASLKAQDFLQIIAAA 250          
BLAST of EY756590 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPF (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.209e-22
Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 1
Query:   16 RPAGSTLDVVAAQTKAIADR--VSSCSTIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 357
            R AG TL+VV  Q  +I +   V + +  V+AYEPVWAIGTG  ATP QAQ+VH  +R+ L A  S E+A   R++YGGSV  AN  EL   PD+DG L+GGASL   EF  I ++A
Sbjct:  134 REAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHKAIREQLAAENS-EVARGVRLLYGGSVKAANAVELFGMPDIDGGLIGGASLNADEFGAICRAA 249          
The following BLAST results are available for this feature:
BLAST of EY756590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_JANMA1.103e-2252.99Triosephosphate isomerase OS=Janthinobacterium sp.... [more]
TPIS_CHLT31.881e-2250.85Triosephosphate isomerase OS=Chloroherpeton thalas... [more]
TPIS_BACFR1.881e-2255.24Triosephosphate isomerase OS=Bacteroides fragilis ... [more]
TPIS_BACFN1.881e-2255.24Triosephosphate isomerase OS=Bacteroides fragilis ... [more]
TPIS_ACTPJ1.881e-2255.17Triosephosphate isomerase OS=Actinobacillus pleuro... [more]
TPIS_ACTP71.881e-2255.17Triosephosphate isomerase OS=Actinobacillus pleuro... [more]
TPIS_ACTP21.881e-2255.17Triosephosphate isomerase OS=Actinobacillus pleuro... [more]
TPIS_ENT382.457e-2253.45Triosephosphate isomerase OS=Enterobacter sp. (str... [more]
TPIS_ACIAC2.457e-2254.31Triosephosphate isomerase OS=Acidovorax avenae sub... [more]
TPIS_PSEPF3.209e-2251.28Triosephosphate isomerase OS=Pseudomonas fluoresce... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756590 ID=EY756590; Name=EY756590; organism=Citrus sinensis; type=EST; length=574bp
TTCCGTCGACCCACGCGTCCGGCAGGATCTACTCTGGATGTTGTTGCTGC
ACAAACTAAAGCAATCGCAGATCGAGTCTCAAGCTGTTCAACCATTGTTT
TGGCCTATGAACCTGTGTGGGCTATTGGAACTGGGAAGGTTGCCACTCCA
GCGCAGGCTCAAGAAGTACATTTTGAACTGAGGAAATGGCTTTTTGCAAA
CACCAGTCCTGAAATTGCTGCAGCAACACGGATCATCTACGGAGGATCCG
TAAATGGTGCAAACTGCAAGGAATTGGCTGCACAGCCTGATGTTGACGGA
TTTTTGGTTGGTGGTGCTTCGTTGAAGCCGGAGTTCATTGACATCATCAA
ATCTGCTGAGCTGAAGTAAAATTCTTGAGCTTTATTTCAAGGGCAGTTTG
CTGATGAAGTATTTACTGTTTGTGGATATATAGAATACGTTTGGTATAAT
TTCAGAATTACTTTTGTTTTTGATAAGCGCGACCAACTGAAACCTTTTTT
TAAACTTTTTTAATTATCTTTGTTTCCTAAGTGTTGGAGTTGAATAAGTC
TTATGTAGTGTTTACCTGCNNNNN
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