EY756585

Overview
NameEY756585
Unique NameEY756585
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.010e-31
Identity = 63/64 (98.44%), Postives = 64/64 (100.00%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.544e-31
Identity = 63/70 (90.00%), Postives = 65/70 (92.86%), Query Frame = 3
Query:    9 PWVCVHDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            P     DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct:  198 PLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.544e-31
Identity = 63/70 (90.00%), Postives = 65/70 (92.86%), Query Frame = 3
Query:    9 PWVCVHDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            P     DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK
Sbjct:  198 PLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.544e-31
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  215 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.544e-31
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  206 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.116e-30
Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWAYATNFVPGK
Sbjct:  204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.116e-30
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 3
Query:    9 PWVCVHDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            P     DPEAFAELKVK IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  198 PLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.458e-30
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DPEAFA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  202 DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.458e-30
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct:  205 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268          
BLAST of EY756585 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.458e-30
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 3
Query:   27 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 218
            DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267          
The following BLAST results are available for this feature:
BLAST of EY756585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
CB21_SINAL5.010e-3198.44Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB2F_SOLLC6.544e-3190.00Chlorophyll a-b binding protein 3B, chloroplastic ... [more]
CB2E_SOLLC6.544e-3190.00Chlorophyll a-b binding protein 3A, chloroplastic ... [more]
CB2A_PINSY6.544e-3196.88Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB22_PEA6.544e-3196.88Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB27_TOBAC1.116e-3096.88Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_TOBAC1.116e-3090.00Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB29_MAIZE1.458e-3095.31Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB28_PEA1.458e-3095.31Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB22_ARATH1.458e-3095.31Chlorophyll a-b binding protein 2, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-C07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756585 ID=EY756585; Name=EY756585; organism=Citrus sinensis; type=EST; length=361bp
CCACGCGTCCGTGGGTTTGTGTTCATGACCCGGAGGCTTTTGCTGAGCTC
AAGGTTAAGGAAATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGG
TTTCTTCGTTCAGGCCATTGTCACCGGCAAGGGACCGTTAGAGAACTTGG
CCGACCACTTGGCTGACCCTGTCAATAACAATGCCTGGGCCTACGCCACC
AACTTTGTCCCCGGAAAGTGAGCTTCGGTTGATAAGAGTTTTTCTCTTTT
CGGTTTCTTGGATATCATGTAAATCTGTTGTGAGCTCATGGAAGCTTTAA
TTTGAGTTGTGATTATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAG
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