EY756579 | Citrus Genome Database

Overview


Name	EY756579
Unique Name	EY756579
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	873

Libraries


Library Name	Type
Sweet orange leaf, field plant B	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP3_RAT (Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus GN=Abcc3 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.782e-47
Identity = 76/155 (49.03%), Postives = 109/155 (70.32%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL*EPSLF 685
            RS+  IIPQ+P+LF GT+R N+DP G+YSDE+IW++LE   L   V+++P  LD   ++ GDN SVGQRQL+CL R +L+ SR+L +D ATA++D +TD  IQ  IR +F  CT+++IAHR+ T+MD +RV+V+D     EF  P  L+    +F
Sbjct: 1358 RSQLTIIPQDPILFSGTLRMNLDPFGRYSDEDIWRTLELSHLSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIAAGGIF 1512

HSP 2 Score: 54.299 bits (129), Expect = 1.782e-47
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1

Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            R+  VRYR    LVLK +TL + GGEK+G+VGRTG+GKS++
Sbjct: 1287 RNYSVRYRPGLELVLKNLTLHVQGGEKVGIVGRTGAGKSSM 1327

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP9_RAT (Multidrug resistance-associated protein 9 OS=Rattus norvegicus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.784e-47
Identity = 70/152 (46.05%), Postives = 113/152 (74.34%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL*EP 676
            R++  +IPQ+PVLF GTVR N+DP+G ++DE +W  LER  ++D +   P+KL + V ++G+N+SVG+RQLLC+ R +L++S+++ +D ATAS+DS+TD  +Q  I+E F +CT+++IAHR+ TV++CD V+V++     EF +P  L  +P
Sbjct: 1201 RTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENGKVIEFDKPEVLAEKP 1352

HSP 2 Score: 57.7658 bits (138), Expect = 1.784e-47
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 1

Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            +D  +RYR NTPLVL G+ L+I  G+ +G+VGRTGSGKS+L
Sbjct: 1130 KDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSL 1170

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.784e-47
Identity = 70/152 (46.05%), Postives = 113/152 (74.34%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL*EP 676
            R++  +IPQ+PVLF GTVR N+DP+G ++DE +W  LER  ++D +   P+KL + V ++G+N+SVG+RQLLC+ R +L++S+++ +D ATAS+DS+TD  +Q  I+E F +CT+++IAHR+ TV++CD V+V++     EF +P  L  +P
Sbjct: 1201 RTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENGKVIEFDKPEVLAEKP 1352

HSP 2 Score: 57.7658 bits (138), Expect = 1.784e-47
Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 1

Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            +D  +RYR NTPLVL G+ L+I  G+ +G+VGRTGSGKS+L
Sbjct: 1130 KDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSL 1170

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.323e-47
Identity = 78/155 (50.32%), Postives = 107/155 (69.03%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL*EPSLF 685
            R +  IIPQ+PVLF G++R N+DP  QYSDEE+W +LE   LK  V+A PDKL+   A+ G+N SVGQRQL+CL R +L+ +++L +D ATA+VD +TD  IQ  IR +F  CT+++IAHR+ T+MD  RVIV+D     E   P  LL +  +F
Sbjct: 1364 RFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGAPSELLQQRGIF 1518

HSP 2 Score: 54.299 bits (129), Expect = 2.323e-47
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 1

Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQE 168
            RD  +RYR +  LVLK I ++I GGEK+G+VGRTG+GKS+L   +LG + + E
Sbjct: 1293 RDYCLRYREDLDLVLKHINVTIEGGEKVGIVGRTGAGKSSL---TLGLFRINE 1342

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.945e-47
Identity = 76/155 (49.03%), Postives = 109/155 (70.32%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL*EPSLF 685
            RS+  IIPQ+P+LF GT+R N+DP G+YS+E+IW++LE   L   V+++P  LD   A+ GDN SVGQRQL+CL R +L+ SR+L +D ATA++D +TD  IQ  IR +F  CT+++IAHR+ T+MD +RV+V+D     EF  P  L+    +F
Sbjct: 1359 RSQLTIIPQDPILFSGTLRMNLDPFGRYSEEDIWRALELSHLNTFVSSQPAGLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIAAGGIF 1513

HSP 2 Score: 53.5286 bits (127), Expect = 3.945e-47
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1

Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            R+  VRYR    LVLK +T+ + GGEK+G+VGRTG+GKS++
Sbjct: 1288 RNYSVRYRPGLELVLKNVTVHVQGGEKVGIVGRTGAGKSSM 1328

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP2_RAT (Canalicular multispecific organic anion transporter 1 OS=Rattus norvegicus GN=Abcc2 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.141e-47
Identity = 75/149 (50.34%), Postives = 107/149 (71.81%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL 667
            R R  IIPQ+P+LF G++R N+DP  +YSDEE+W++LE   L+  V+     L S V + GDN S+GQRQLLCLGR +L+ S++L +D ATA+VD +TD+ IQ  IR+EF+ CT+I+IAHR+ T+MD D+++V+D     E+  P  LL
Sbjct: 1370 RERLTIIPQDPILFSGSLRMNLDPFNKYSDEEVWRALELAHLRSFVSGLQLGLLSEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRKEFSQCTVITIAHRLHTIMDSDKIMVLDNGKIVEYGSPEELL 1518

HSP 2 Score: 53.9138 bits (128), Expect = 5.141e-47
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1

Query:   22 VRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            VRYR    LVLKGIT +I  GEK+GVVGRTG+GKS+L
Sbjct: 1303 VRYRPELDLVLKGITCNIKSGEKVGVVGRTGAGKSSL 1339

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.728e-47
Identity = 78/149 (52.35%), Postives = 110/149 (73.83%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL 667
            R   GIIPQ PVLF GTVR N+DP  +++D ++W+SLER  LKD +   P  LD+ V ++G+N+SVGQRQLL L R +L+ S++L +D ATA+VD +TD  IQ+ IREEF +CT++ IAHR+ T++DCD+V+V+D+   +EF  P  LL
Sbjct: 1311 RKVLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRLNTIIDCDKVLVLDSGKVQEFSSPENLL 1459

HSP 2 Score: 44.669 bits (104), Expect = 8.728e-47
Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 1

Query:    4 RVRDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQEG 171
            +  D+ +RYR   P VL G++  I   +K+G+VGRTG+GKS+L         L++G
Sbjct: 1238 KFEDVVLRYRPELPPVLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKG 1293

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: ABCCB_HUMAN (ATP-binding cassette transporter sub-family C member 11 OS=Homo sapiens GN=ABCC11 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.071e-46
Identity = 72/156 (46.15%), Postives = 110/156 (70.51%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL*EP-SLF 685
            RS+  +IPQ+PVL  GT+R N+DP  +++D++IW +LER  L   ++  P KL + V ++G N+SVG+RQLLC+ R +L++S+++ +D ATAS+D +TD  IQR IRE F  CT++ IAHR+ TV++CD ++V+      EF +P  L  +P SLF
Sbjct: 1215 RSKLSVIPQDPVLLSGTIRFNLDPFDRHTDQQIWDALERTFLTKAISKFPKKLHTDVVENGGNFSVGERQLLCIARAVLRNSKIILIDEATASIDMETDTLIQRTIREAFQGCTVLVIAHRVTTVLNCDHILVMGNGKVVEFDRPEVLRKKPGSLF 1370

HSP 2 Score: 58.151 bits (139), Expect = 1.071e-46
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 1

Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            +D H++YR NTP VL GI L+I G E +G+VGRTGSGKS+L
Sbjct: 1144 QDYHMKYRDNTPTVLHGINLTIRGHEVVGIVGRTGSGKSSL 1184

HSP 3 Score: 21.9422 bits (45), Expect = 1.071e-46
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3

Query:  144 FRLVEPSGGRSLL 182
            FRLVEP  GR L+
Sbjct: 1189 FRLVEPMAGRILI 1201

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP4_HUMAN (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 1.485e-46
Identity = 79/168 (47.02%), Postives = 123/168 (73.21%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL-*EPSLFXPWVQEYAHRSA 721
            R +  IIPQEPVLF GT+R N+DP  +++DEE+W +L+  QLK+ +   P K+D+ +A+SG N+SVGQRQL+CL R +L+ +++L +D ATA+VD +TD  IQ+ IRE+FA CT+++IAHR+ T++D D+++V+D+   +E+ +P+ LL  + SLF   VQ+     A
Sbjct: 1114 RKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWNALQEVQLKETIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQQLGKAEA 1281

HSP 2 Score: 42.743 bits (99), Expect = 1.485e-46
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 1

Query:   13 DLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            +++  Y    PLVLK +T  I   EK+G+VGRTG+GKS+L
Sbjct: 1045 NVNFMYSPGGPLVLKHLTALIKSQEKVGIVGRTGAGKSSL 1084

[Close]

BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MRP2_MOUSE (Canalicular multispecific organic anion transporter 1 OS=Mus musculus GN=Abcc2 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.933e-46
Identity = 77/149 (51.68%), Postives = 105/149 (70.47%), Query Frame = 2

Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAXWGEEFWQPFRLL 667
            R R  IIPQ+P+LF G +R N+DP  +YSDEEIW++LE   LK  VA     L   V + GDN S+GQRQLLCLGR +L+ S++L +D ATA+VD +TD+ IQ  IR EF+ CT+I+IAHR+ T+MD D+++V+D+    E+  P  LL
Sbjct: 1372 RGRLTIIPQDPILFSGNLRMNLDPFNKYSDEEIWRALELAHLKSFVAGLQLGLLHEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRNEFSQCTVITIAHRLHTIMDSDKIMVLDSGKIVEYGSPEELL 1520

HSP 2 Score: 50.8322 bits (120), Expect = 1.933e-46
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1

Query:   22 VRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            VRYR    LVLKGIT +I   EK+GVVGRTG+GKS+L
Sbjct: 1305 VRYRPELDLVLKGITCNIKSTEKVGVVGRTGAGKSSL 1341

The following BLAST results are available for this feature:

BLAST of EY756579 vs. ExPASy Swiss-Prot

BLAST of EY756579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 387


Match Name	E-value	Identity	Description
MRP3_RAT	1.782e-47	49.03	Canalicular multispecific organic anion transporte...	[more]
MRP9_RAT	1.784e-47	46.05	Multidrug resistance-associated protein 9 OS=Rattu...	[more]
MRP9_MOUSE	1.784e-47	46.05	Multidrug resistance-associated protein 9 OS=Mus m...	[more]
MRP1_MOUSE	2.323e-47	50.32	Multidrug resistance-associated protein 1 OS=Mus m...	[more]
MRP3_MOUSE	3.945e-47	49.03	Canalicular multispecific organic anion transporte...	[more]
MRP2_RAT	5.141e-47	50.34	Canalicular multispecific organic anion transporte...	[more]
AB1C_ARATH	8.728e-47	52.35	ABC transporter C family member 1 OS=Arabidopsis t...	[more]
ABCCB_HUMAN	1.071e-46	46.15	ATP-binding cassette transporter sub-family C memb...	[more]
MRP4_HUMAN	1.485e-46	47.02	Multidrug resistance-associated protein 4 OS=Homo ...	[more]
MRP2_MOUSE	1.933e-46	51.68	Canalicular multispecific organic anion transporte...	[more]

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Properties


Property Name	Value
Genbank description	CS13-C1-001-010-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY756579 ID=EY756579; Name=EY756579; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGAGACTTGCATGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCTCGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTATTCAGGTTTTCTTTAGGC
TGGTGGAGCCTTCAGGAGGGAGATCATTATTGATGGAATCGACATTTCAT
TGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAA
CCTGTCCTTTTTGAAGGAACTGTGAGAAGCAATGTTGATCCAATTGGTCA
GTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAG
ATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGT
GGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGT
TATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGANGCGACGGCTTCTG
TTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGTTT
GCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGA
TTGTGATAGAGTTATAGTTGTTGATGCANGATGGGGCGAAGAATTTTGGC
AGCCATTCAGGTTGCTTTGAGAGCCATCACTCTTTGNACCATGGGTGCAA
GAGTATGCCCACCGATCGGCCAGACTGGAGGAACAATCCTTTGCCCTTAA
TGTTGGTTGAAAGAAGTTTCTGGGATGGAATGCCTATGAGTTTAAAAACC
CCTTGGGCTGCCATGAAAAATCCTTCTCCCCCTTCAAATTGCCCCAAAAA
ATTCTTCGAAAAAGGCCTGGAAG