EY756579

Overview
NameEY756579
Unique NameEY756579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MSBA_RALME (Lipid A export ATP-binding/permease protein msbA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=msbA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 43/139 (30.94%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNV----DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625
            R +   + Q+ VLF  TV +NV     P  +     + ++L    L DVV   P+ L++ + D+G   S GQRQ L + R + K + +L +D AT+++DS+++ ++Q  +       T + IAHR+ T+ + DR++V++
Sbjct:  424 RRQIAFVSQDVVLFNDTVAANVAYGVHPREKIDMARVERALAAAYLTDVVKGLPEGLETNIGDNGMKLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERQVQAALESLMVGRTTLVIAHRLSTIENADRIVVLE 562          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris GN=ndvA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.240e-15
Identity = 42/137 (30.66%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625
            R   G++ QE +LF+ ++  N+  +G+   + EE+  + ER Q  + +     K D+   + G   S G+RQ L + R +LK   +L +D AT+++D+ T+A++   + E     T   IAHR+ T+ D  R++V D
Sbjct:  418 RRNIGVVFQEALLFDRSIADNLR-VGKPDATPEELRLAAERAQALEFIERSDHKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKLNLALDEVMKGRTTFVIAHRLSTIRDATRILVFD 553          

HSP 2 Score: 27.7202 bits (60), Expect = 6.240e-15
Identity = 11/26 (42.31%), Postives = 19/26 (73.08%), Query Frame = 1
Query:   52 LKGITLSILGGEKIGVVGRTGSGKST 129
            ++ ++ + L G+ I +VG TG+GKST
Sbjct:  361 IEDLSFTALPGDTIALVGATGAGKST 386          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: Y691_RICTY (Putative export ATP-binding/permease protein RT0691 OS=Rickettsia typhi GN=RT0691 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.246e-15
Identity = 36/136 (26.47%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVD-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625
            R     +PQE  +F  T++SN+     + SD EI + ++   +++      D +++ + + G   S GQ+Q + + R +L+  ++L +D A +++D+ ++ ++   I++      IISIAHRI ++   D ++V+D
Sbjct:  411 RKFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSNKLHDGINTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMKGNIIISIAHRISSIESADYILVID 546          

HSP 2 Score: 34.2686 bits (77), Expect = 6.246e-15
Identity = 17/55 (30.91%), Postives = 32/55 (58.18%), Query Frame = 1
Query:   10 RDLHVRYRSNTPL-VLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQEG 171
            +++   Y S   L ++  ++L I   + +G+VGR+G+GKSTL +  L ++    G
Sbjct:  339 KNVDFTYNSRPNLKIINNMSLKINANKFVGIVGRSGAGKSTLIQLLLRFYRQDNG 393          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: LCN3_LACLA (Lacticin-481/lactococcin-DR transport/processing ATP-binding protein lcnDR3 OS=Lactococcus lactis subsp. lactis GN=lcnDR3 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 8.081e-15
Identity = 38/140 (27.14%), Postives = 74/140 (52.86%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKS---LERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMDCDRVIVVD 625
            R   G++ Q   L +G++  N+       + +I K    L+   + ++V + P K+ S + ++G N S GQ Q L + + +L +++ +F D   +S+D+Q    I + + E  ++ + TII I+H +  +   DRVI +D
Sbjct:  528 RQIIGVVSQNMNLRKGSLIENIVSNNNSEELDIQKINDVLKDVNMLELVDSLPQKIFSQLFENGKNLSGGQIQRLLIAKSLLNNNKFIFWDEPFSSLDNQNRIHIYKNVLENPDYKSQTIIMISHHLDVLKYVDRVIYID 667          

HSP 2 Score: 43.5134 bits (101), Expect = 8.081e-15
Identity = 22/48 (45.83%), Postives = 29/48 (60.42%), Query Frame = 1
Query:    7 VRDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLG 150
            ++D+   Y  N   +   I  SI  GEKI +VG++GSGKSTLF   LG
Sbjct:  466 LKDISYSYELNN-YIFNNINFSIKKGEKIAIVGKSGSGKSTLFNILLG 512          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: YNT9_SCHPO (Uncharacterized ABC transporter ATP-binding protein/permease C9B6.09c OS=Schizosaccharomyces pombe GN=SPBC9B6.09c PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.049e-14
Identity = 45/137 (32.85%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVD-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMDCDRVIVV 622
            RS FG++ QEPVLF GT+  N+       S EEI  + +R     V++  P+K  + V   G   S GQ+Q + + R +L++   L +D AT+++D + +  + + I+      + T I+IAH++ T+   D++IVV
Sbjct:  557 RSHFGLVGQEPVLFSGTIGENIAYGKSNASQEEIEDAAKRANCSFVLSF-PEKWSTQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAHKLATIRRADQIIVV 692          

HSP 2 Score: 24.6386 bits (52), Expect = 1.049e-14
Identity = 10/41 (24.39%), Postives = 21/41 (51.22%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQEG 171
            +   ++  I  G  + +V  +G GKST+ +  L +++   G
Sbjct:  499 IFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPSSG 539          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: NDVA_NITWN (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=ndvA PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.053e-14
Identity = 42/135 (31.11%), Postives = 74/135 (54.81%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIV 619
            R   G++ QEP+LF  ++  N+  +G+   +DEE+  +  R Q  D +     K D+   + G   S G+RQ L + R +LK   +L +D AT+++D+ T+A++   + E     T   IAHR+ T+ +  R++V
Sbjct:  418 RRNIGVVFQEPLLFNRSIAENLR-VGKPDATDEEMRLAAGRAQALDFIERGEKKFDTHAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNAALDEVMKGRTTFVIAHRLSTIRNAARILV 551          

HSP 2 Score: 27.7202 bits (60), Expect = 1.053e-14
Identity = 16/39 (41.03%), Postives = 21/39 (53.85%), Query Frame = 1
Query:   13 DLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKST 129
            D+   Y S  P V   ++     GE I +VG TG+GKST
Sbjct:  349 DVSFSYDSKRPAVAN-LSFVASPGETIALVGPTGAGKST 386          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: TAP2_RAT (Antigen peptide transporter 2 OS=Rattus norvegicus GN=Tap2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.363e-14
Identity = 36/130 (27.69%), Postives = 77/130 (59.23%), Query Frame = 2
Query:  236 IIPQEPVLFEGTVRSNVD-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            ++ QEPVLF G+V+ N+   +    D ++  + +     D +    + +++ + + G   +VGQ+Q L + R ++++ R+L +D AT+++D++ +  +Q    +E    T++ IAHR+ TV + D+V+V+
Sbjct:  548 LVGQEPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEMTNGINTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSALDAECEQALQTWRSQEDR--TMLVIAHRLHTVQNADQVLVL 675          

HSP 2 Score: 29.261 bits (64), Expect = 1.363e-14
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKSTL 132
            VL+G+T ++  G+   +VG  GSGKST+
Sbjct:  485 VLQGLTFTLHPGKVTALVGPNGSGKSTV 512          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: TAGD_DICDI (Serine protease/ABC transporter B family protein tagD OS=Dictyostelium discoideum GN=tagD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.734e-14
Identity = 32/130 (24.62%), Postives = 72/130 (55.38%), Query Frame = 2
Query:  239 IPQEPVLFEGTVRSNVD-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625
            + Q P LF+ T+  N+   +   + E+I ++ +     + + + P + D+++ D G N S GQ++ + + R +    +++ +D  TA +D +++  I + I+      T++ +AH++  V DCD++ V+D
Sbjct: 1659 VHQHPFLFDATISENIGYALDNPTQEDIIEAAKLANAHEFIQSLPKQYDTMLTDGG-NLSGGQKKRIAVARAICAKRKIMLLDEITAELDPESEEAINKSIKVLTRGHTVVMVAHKVAAVRDCDKIFVLD 1787          

HSP 2 Score: 30.8018 bits (68), Expect = 1.734e-14
Identity = 17/38 (44.74%), Postives = 22/38 (57.89%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSL 162
            VL  I L    G+  G+VG +GSGKSTL      ++SL
Sbjct: 1593 VLYNIDLKFESGKCYGLVGPSGSGKSTLLELISRFYSL 1630          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: AB6B_ARATH (ABC transporter B family member 6 OS=Arabidopsis thaliana GN=ABCB6 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 1.744e-14
Identity = 38/137 (27.74%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSDEEIWKSLER-CQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAA-CTIISIAHRIPTVMDCDRVIVVD 625
            RS  G+I QEP++F  T+R N+      + E   K   R       +++ P   D+ +   G   + GQ+Q + + RV+LK++ +L +D A++S++S++   +Q  +        T I IAHR+  +   D ++V++
Sbjct: 1233 RSHMGLIQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTQGQKQRIAIARVVLKNAPILLIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLN 1369          

HSP 2 Score: 34.2686 bits (77), Expect = 1.744e-14
Identity = 15/29 (51.72%), Postives = 21/29 (72.41%), Query Frame = 1
Query:   46 LVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            LVL   +L + GG+ + VVG +GSGKST+
Sbjct: 1174 LVLSNFSLKVNGGQTVAVVGVSGSGKSTI 1202          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPB (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB18) GN=ndvA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.778e-14
Identity = 41/138 (29.71%), Postives = 74/138 (53.62%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDA 628
            R   G++ QE +LF  ++  N+  +G+   ++EE+  +  R Q  D +     K D+   + G   S G+RQ L + R +LK   +L +D AT+++D+ T+A++   + E     T   IAHR+ T+    R++V +A
Sbjct:  418 RRNIGVVFQEALLFNRSIADNLR-VGKPDATEEEMRTAASRAQALDFIERSEQKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFEA 554          

HSP 2 Score: 28.1054 bits (61), Expect = 1.778e-14
Identity = 15/40 (37.50%), Postives = 22/40 (55.00%), Query Frame = 1
Query:   10 RDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKST 129
            +D+   Y    P V   ++ +   GE I +VG TG+GKST
Sbjct:  348 KDVSFSYDGKRPAVAD-LSFTARPGETIALVGATGAGKST 386          
The following BLAST results are available for this feature:
BLAST of EY756579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 387
Match NameE-valueIdentityDescription
MSBA_RALME6.197e-1530.94Lipid A export ATP-binding/permease protein msbA O... [more]
NDVA_RHOPA6.240e-1530.66Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
Y691_RICTY6.246e-1526.47Putative export ATP-binding/permease protein RT069... [more]
LCN3_LACLA8.081e-1527.14Lacticin-481/lactococcin-DR transport/processing A... [more]
YNT9_SCHPO1.049e-1432.85Uncharacterized ABC transporter ATP-binding protei... [more]
NDVA_NITWN1.053e-1431.11Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
TAP2_RAT1.363e-1427.69Antigen peptide transporter 2 OS=Rattus norvegicus... [more]
TAGD_DICDI1.734e-1424.62Serine protease/ABC transporter B family protein t... [more]
AB6B_ARATH1.744e-1427.74ABC transporter B family member 6 OS=Arabidopsis t... [more]
NDVA_RHOPB1.778e-1429.71Beta-(1-->2)glucan export ATP-binding/permease pro... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756579 ID=EY756579; Name=EY756579; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGAGACTTGCATGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCTCGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTATTCAGGTTTTCTTTAGGC
TGGTGGAGCCTTCAGGAGGGAGATCATTATTGATGGAATCGACATTTCAT
TGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAA
CCTGTCCTTTTTGAAGGAACTGTGAGAAGCAATGTTGATCCAATTGGTCA
GTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAG
ATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGT
GGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGT
TATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGANGCGACGGCTTCTG
TTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGTTT
GCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGA
TTGTGATAGAGTTATAGTTGTTGATGCANGATGGGGCGAAGAATTTTGGC
AGCCATTCAGGTTGCTTTGAGAGCCATCACTCTTTGNACCATGGGTGCAA
GAGTATGCCCACCGATCGGCCAGACTGGAGGAACAATCCTTTGCCCTTAA
TGTTGGTTGAAAGAAGTTTCTGGGATGGAATGCCTATGAGTTTAAAAACC
CCTTGGGCTGCCATGAAAAATCCTTCTCCCCCTTCAAATTGCCCCAAAAA
ATTCTTCGAAAAAGGCCTGGAAG
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