EY756579

Overview
NameEY756579
Unique NameEY756579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: ABCB8_DANRE (ATP-binding cassette sub-family B member 8, mitochondrial OS=Danio rerio GN=abcb8 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.509e-12
Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  233 GIIPQEPVLFEGTVRSNVDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            G I QEPVLF  +V  N+   G+ S  D E+  + ++    + +    D  +++V + G   S GQ+Q + + R ++K+  +L +D AT+++D++++  +Q  +       T++ IAHR+ T+   D + V+
Sbjct:  550 GFISQEPVLFGTSVMENI-RFGKPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVVQEALDRATTGRTVLIIAHRLSTIQAADLICVM 680          

HSP 2 Score: 25.409 bits (54), Expect = 1.509e-12
Identity = 10/28 (35.71%), Postives = 19/28 (67.86%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKSTL 132
            +LK  +L++   + + +VG +G GKST+
Sbjct:  487 ILKHFSLTLPPCKTVAIVGESGGGKSTV 514          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MSBA_DECAR (Lipid A export ATP-binding/permease protein msbA OS=Dechloromonas aromatica (strain RCB) GN=msbA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 38/136 (27.94%), Postives = 77/136 (56.62%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSD--EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            R    ++ Q+ VLF  T+ +N+   G+     +EI  + +     + + A P+ L++++ ++G   S GQRQ L + R +LK + +L +D AT+++D++++  +Q  + E     + + IAHR+ T+   DR+I +
Sbjct:  415 RDNIALVSQDVVLFNDTIGANIAYGGKRDATLDEIRAAAKAAHALEFIDALPEGLNTMIGENGVKLSGGQRQRLAIARAILKDAPILILDEATSALDTESERHVQAALDELMRGRSTLVIAHRLSTIERADRIIAL 550          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MDR_PLAFF (Multidrug resistance protein OS=Plasmodium falciparum (isolate FC27 / Papua New Guinea) GN=MDR1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 42/137 (30.66%), Postives = 82/137 (59.85%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQYSD--EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMDCDRVIV 619
            R+ F I+ QEP+LF  ++  N+   G+     E++ +  +   + + + + P+K D+ V   G + S GQ+Q + + R +L+  ++L +D AT+S+DS ++  I++ I +  + A  TII+IAHRI ++   D+++V
Sbjct: 1248 RNLFSIVSQEPMLFNMSIYENIK-FGREDATLEDVKRVSKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVV 1383          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.508e-12
Identity = 37/137 (27.01%), Postives = 68/137 (49.64%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNV---DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            R + G++ QEP LF  T+  N+    P     + E   S         +   P   D+ V + G   S GQ+Q + + R MLK  ++L +D AT+++D+ +++ +Q  +       T + +AHR+ T+ + D + V+
Sbjct:  440 REQIGLVNQEPALFATTILENILYGKPDATMVEVEAAASAANAH--SFITLLPKGYDTQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDASSESIVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVI 574          

HSP 2 Score: 26.5646 bits (57), Expect = 2.508e-12
Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 1
Query:   46 LVLKGITLSILGGEKIGVVGRTGSGKSTL 132
            ++ +   +    G+ + VVG +GSGKST+
Sbjct:  381 MIFRNFNIFFPSGKTVAVVGGSGSGKSTV 409          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: MDR65_DROME (Multidrug resistance protein homolog 65 OS=Drosophila melanogaster GN=Mdr65 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 39/137 (28.47%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNV---DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            R++ GI+ QEP LFE ++  N+   D     S  EI  + +       + + P+  D+ +   G   S GQ+Q + + R ++++ ++L +D AT+++D Q++  +Q+ +    +  T I IAHR+ TV + D + V+
Sbjct: 1135 RTKLGIVSQEPTLFERSIAENIAYGDNRRSVSMVEIIAAAKSANAHSFIISLPNGYDTRMGARGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVI 1271          

HSP 2 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 34/136 (25.00%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            RS   ++ QEPVLF GT+  N+   G+   + +EI  +  +    + +   P+   S++ + G   S GQ+Q + + R ++++ ++L +D AT+++D Q++ ++Q+ +       T I ++HR+  +   D+++ +
Sbjct:  480 RSNIAVVGQEPVLFLGTIAQNIS-YGKPGATQKEIEAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFI 614          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: TAGB_DICDI (Serine protease/ABC transporter B family protein tagB OS=Dictyostelium discoideum GN=tagB PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 3.223e-12
Identity = 32/130 (24.62%), Postives = 71/130 (54.62%), Query Frame = 2
Query:  239 IPQEPVLFEGTVRSNVD-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVD 625
            + Q P LF+ T+  N+   I   + E+I ++ +     + +   P K D+ + ++G N S GQ++ + + R +    +++ +D  TA +D +++  I + I+      T++ +AH++  V DCD++ V++
Sbjct: 1602 VHQHPFLFDATIGENIGYAIDNPTQEDIIEAAKLAYAHEFINDLPKKYDTQIGEAG-NLSGGQKKRIAVARAICAKRKIMLLDEITAELDPESEEAITQSIKVLTQGHTVVMVAHKVAAVRDCDKIFVLE 1730          

HSP 2 Score: 27.335 bits (59), Expect = 3.223e-12
Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKST 129
            VL  I +    G+  G+VG +GSGKST
Sbjct: 1535 VLHNINMKFEAGKCYGLVGPSGSGKST 1561          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: PEDD_PEDAC (Pediocin PA-1 transport/processing ATP-binding protein pedD OS=Pediococcus acidilactici GN=pedD PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.302e-12
Identity = 38/141 (26.95%), Postives = 75/141 (53.19%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIGQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQR---IIREEFAACTIISIAHRIPTVMDCDRVIVVD 625
            R     +PQEP +F G+V  N+  +G     + + I ++    ++K  +   P    + +++SG N S GQ+Q L + R +L  ++    D +T+++D+ T+ +I      ++++    TII +AHR+      D+V+V+D
Sbjct:  561 RQYINYVPQEPFIFSGSVLENL-LLGSRPGVTQQMIDQACSFAEIKTDIENLPQGYHTRLSESGFNLSGGQKQRLSIARALLSPAQCFIFDESTSNLDTITEHKIVSKLLFMKDK----TIIFVAHRLNIASQTDKVVVLD 696          

HSP 2 Score: 35.4242 bits (80), Expect = 3.302e-12
Identity = 16/40 (40.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQE 168
            +L+ ++L+I   +KI +VG +GSGK+TL +  +G++  QE
Sbjct:  501 ILEDVSLTIPHHQKITIVGMSGSGKTTLAKLLVGFFEPQE 540          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: CYDD_HAEIN (ATP-binding/permease protein cydD OS=Haemophilus influenzae GN=cydD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNVDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLD--SLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 622
            R     + Q P+L +GT++ N+  +G  Q +DEEI ++L R Q K+      DKL     + D G   SVGQ Q L + R +L+   LL +D  TAS+D+Q++  + + + E     T + I HRI  +  CD++ V+
Sbjct:  422 RKHIAWVGQNPLLLQGTIKENL-LLGDVQANDEEINQALMRSQAKEFT----DKLGLHHEIKDGGLGISVGQAQRLAIARALLRKGDLLLLDEPTASLDAQSENLVLQALNEASQHQTTLMITHRIEDLKQCDQIFVM 554          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: LCNCL_LACLA (Lactococcin transport/processing ATP-binding protein lcnC-like OS=Lactococcus lactis subsp. lactis GN=lcnC PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.218e-11
Identity = 37/138 (26.81%), Postives = 73/138 (52.90%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNV--DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRIIREEFAA-CTIISIAHRIPTVMDCDRVIVVD 625
            R     +PQ+P +F G++  N+        S EEI +++E  +++  +        + ++    + S GQ+Q + L R +L  +++L +D AT+++D  T+   ++I++   A   TII IAHR+       R+IV++
Sbjct:  555 RRLINYLPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITE---KKILKNLLALDKTIIFIAHRLSVAEMSHRIIVIE 689          

HSP 2 Score: 33.8834 bits (76), Expect = 1.218e-11
Identity = 18/41 (43.90%), Postives = 25/41 (60.98%), Query Frame = 1
Query:   49 VLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQEG 171
            VL  I LSI   EK+ +VG +GSGKSTL +  + ++    G
Sbjct:  497 VLSEIKLSIKENEKLTIVGISGSGKSTLVKLLVNFFQPTSG 537          
BLAST of EY756579 vs. ExPASy Swiss-Prot
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 1.257e-11
Identity = 43/144 (29.86%), Postives = 69/144 (47.92%), Query Frame = 2
Query:  221 RSRFGIIPQEPVLFEGTVRSNV----DPIGQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDXATASVDSQTDAEIQRII--REEFAACTIISIAHRIPTVMDCDRVI--VVD 625
            R R G++ Q PVLF+GTV  NV    +  G+  SDEE++K L    L    A K          +G   SVGQ Q + L R +     +L +D  T+++D  +   I+ +I   ++    T + ++H I  +     ++  VVD
Sbjct:  102 RRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKK----------TGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVIVSHSIKQIQKVADIVCLVVD 235          

HSP 2 Score: 39.6614 bits (91), Expect = 1.257e-11
Identity = 23/55 (41.82%), Postives = 30/55 (54.55%), Query Frame = 1
Query:    4 RVRDLHVRYRSNTPLVLKGITLSILGGEKIGVVGRTGSGKSTLFRFSLGWWSLQE 168
            RV DL  R   +   +LKG+T+ I  G  +GV+G +GSGKST  R     W   E
Sbjct:   30 RVHDL-TRVADDGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPE 83          
The following BLAST results are available for this feature:
BLAST of EY756579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 387
Match NameE-valueIdentityDescription
ABCB8_DANRE1.509e-1228.03ATP-binding cassette sub-family B member 8, mitoch... [more]
MSBA_DECAR2.204e-1227.94Lipid A export ATP-binding/permease protein msbA O... [more]
MDR_PLAFF2.204e-1230.66Multidrug resistance protein OS=Plasmodium falcipa... [more]
AB19B_ARATH2.508e-1227.01ABC transporter B family member 19 OS=Arabidopsis ... [more]
MDR65_DROME2.878e-1228.47Multidrug resistance protein homolog 65 OS=Drosoph... [more]
TAGB_DICDI3.223e-1224.62Serine protease/ABC transporter B family protein t... [more]
PEDD_PEDAC3.302e-1226.95Pediocin PA-1 transport/processing ATP-binding pro... [more]
CYDD_HAEIN6.413e-1234.06ATP-binding/permease protein cydD OS=Haemophilus i... [more]
LCNCL_LACLA1.218e-1126.81Lactococcin transport/processing ATP-binding prote... [more]
AB17I_ARATH1.257e-1129.86ABC transporter I family member 17 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756579 ID=EY756579; Name=EY756579; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGAGACTTGCATGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCTCGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTATTCAGGTTTTCTTTAGGC
TGGTGGAGCCTTCAGGAGGGAGATCATTATTGATGGAATCGACATTTCAT
TGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAA
CCTGTCCTTTTTGAAGGAACTGTGAGAAGCAATGTTGATCCAATTGGTCA
GTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAG
ATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGT
GGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGT
TATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGANGCGACGGCTTCTG
TTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGTTT
GCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGA
TTGTGATAGAGTTATAGTTGTTGATGCANGATGGGGCGAAGAATTTTGGC
AGCCATTCAGGTTGCTTTGAGAGCCATCACTCTTTGNACCATGGGTGCAA
GAGTATGCCCACCGATCGGCCAGACTGGAGGAACAATCCTTTGCCCTTAA
TGTTGGTTGAAAGAAGTTTCTGGGATGGAATGCCTATGAGTTTAAAAACC
CCTTGGGCTGCCATGAAAAATCCTTCTCCCCCTTCAAATTGCCCCAAAAA
ATTCTTCGAAAAAGGCCTGGAAG
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