EY756567

Overview
NameEY756567
Unique NameEY756567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: Y1879_STAES (Putative 2-hydroxyacid dehydrogenase SE_1879 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1879 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.311e-18
Identity = 63/226 (27.88%), Postives = 113/226 (50.00%), Query Frame = 1
Query:  124 KHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHH-QVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            +H   L  L+ST      V  + I  A NL+++   G G ++ID+       + V     ++  + A+  +  IL + R  + G H    +G    A + +R  ++ GKT+G +G G IG  + +R + F+ ++LY    + + + E++ GAK+  DLDT+L   D + +N         M D ++  KMK    ++N  RG I++ Q++V+A  +  I G + DV
Sbjct:   43 EHADALVSLLSTS-----VDKDIIDSANNLKIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDHLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRKEEK-ERDIGAKYV-DLDTLLKNADFITINAAYNPSLHHMIDTEQFNKMKSTAYLINAGRGPIVNEQSLVEALDNKVIEGAALDV 261          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.311e-18
Identity = 63/206 (30.58%), Postives = 109/206 (52.91%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAG 783
            V AE +++A  L++  +  VG D+ D+      G+ +         +VA+  +  +L   R  +    +V SGEW  +    +   D+  K +G +G GRIG  L QR    F   +LY+ R   D + E+   A++  DLDT+L + D + ++ PLTE+T  +  ++++AKMK+  +++N  RG ++D QA++ A   G  H AG
Sbjct:   56 VDAEFLRQAPKLRVASSISVGYDNFDVAALNDRGVLLMHTPTVLTETVADTMMALVLSSARRVVEMAERVKSGEWRGSISSDWFGIDVHHKKLGILGMGRIGLALAQRAHLGFGMPILYNARKHHD-EAEQRFDAEYC-DLDTLLAESDFLCISLPLTEQTHHLIGREQLAKMKRSAILINAGRGPVVDEQALIAALKDGTLHAAG 259          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: DDH_HAEIN (2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae GN=ddh PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.311e-18
Identity = 58/199 (29.15%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  202 AKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            A  ++++     G +++DL      G+ V  V   +  +VAE  +  ++ L R     + +     +++ G+    +++ G+TVG +G G+IG  +++ LK F  N+L +D  K +P +E E G ++ E LD +  K  ++ ++ P T +   + + +  AKMK GV+IVN +RG+++DTQA +DA     I     DV
Sbjct:   66 ALGVKIVALRCAGFNNVDLKAAQELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLI--GFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFK-NPVVE-ELGGQYVE-LDELYAKSHVITLHCPATPENYHLLNCEAFAKMKDGVMIVNTSRGSLIDTQAAIDALKQRKIGALGMDV 259          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_ECOL5 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ghrB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.385e-18
Identity = 63/209 (30.14%), Postives = 103/209 (49.28%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++  KMK   + +N  RG ++D  A++ A   G I     DV
Sbjct:   56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETYHLFGAEQFGKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262          

HSP 2 Score: 21.9422 bits (45), Expect = 1.385e-18
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.712e-18
Identity = 58/197 (29.44%), Postives = 97/197 (49.24%), Query Frame = 1
Query:  205 KNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEW-NVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSG 792
            +N++ + T  +G DHIDL+     G+ V        V+ AE  ++ +L   R    G   + +  W     +      L+ KT+G  G G IG+ L +R + F+ ++ Y D  +     E    A F + LD++L       +N P T +TR  F+K  I  + +G ++VN ARG ++D + VV A  +G +A Y+G
Sbjct:   68 ENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA-YAG 263          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_SERP5 (Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans (strain 568) GN=ghrB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.801e-18
Identity = 60/201 (29.85%), Postives = 105/201 (52.24%), Query Frame = 1
Query:  193 IKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAG 783
            +++   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F   +LY+ R +   + E+   A+   DLDT+L + D + +  PLT++T  M  +D++AKMKK  +++N  RG ++D  A+++A  +G  H AG
Sbjct:   61 LQQTPKLRAASTISVGYDNFDVDALNAHNVLLMHTPTVLTETVADTIMSLVLATARRVVEVAERVKAGEWQGSIGADWFGVDVHHKTIGILGMGRIGLALAQRAHFGFGMPVLYNAR-RTHEEAEQRFNAR-RCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKKSGILINAGRGPVVDEAALIEALQNGTIHAAG 259          

HSP 2 Score: 20.4014 bits (41), Expect = 1.801e-18
Identity = 8/33 (24.24%), Postives = 13/33 (39.39%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQ 892
            +FE        P   +PN    PH+   T + +
Sbjct:  262 VFEKEPLPVSSPLLTLPNVVALPHIGSATHETR 294          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_ECOHS (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O9:H4 (strain HS) GN=ghrB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.801e-18
Identity = 63/209 (30.14%), Postives = 103/209 (49.28%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A  ++K   L+   T  VG D+ D++      + +         +VA+  +  +L   R  +    +V +G W  + G  +   D+  KT+G VG GRIG  L QR    FN  +LY+ R +   + E+   A++  DLDT+L + D V +  PLT++T  +F  ++ AKMK   + +N  RG ++D  A++ A   G I     DV
Sbjct:   56 VDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGGWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNAR-RHHKEAEERFNARYC-DLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDV 262          

HSP 2 Score: 21.9422 bits (45), Expect = 1.801e-18
Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 2
Query:  794 MFESTTSSKGHPWRYMPNQAMTPHVSGTTXDAQLRYAA 907
            +FE    S   P   M N    PH+   T + +   AA
Sbjct:  262 VFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAA 299          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_YERPS (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis GN=ghrB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.235e-18
Identity = 62/201 (30.85%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  193 IKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAG 783
            ++ A NL+   T  VG D+ D+      G+ +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G  H AG
Sbjct:   61 LQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAG 259          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.235e-18
Identity = 62/201 (30.85%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  193 IKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAG 783
            ++ A NL+   T  VG D+ D+      G+ +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G  H AG
Sbjct:   61 LQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAG 259          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.235e-18
Identity = 62/201 (30.85%), Postives = 103/201 (51.24%), Query Frame = 1
Query:  193 IKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVA-GVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG--HIAG 783
            ++ A NL+   T  VG D+ D+      G+ +         +VA+  +  +L   R  +    +V +GEW  + G  +   D+  KT+G +G GRIG  L QR    F+  +LY  R +     E+  GA+    LDT+L + D + +  P+TE+T  M  ++++AKMK   +++N  RG ++D QA++ A   G  H AG
Sbjct:   61 LQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSR-RPHEAAEQRFGAR-HCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAG 259          
The following BLAST results are available for this feature:
BLAST of EY756567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
Y1879_STAES1.311e-1827.88Putative 2-hydroxyacid dehydrogenase SE_1879 OS=St... [more]
GHRB_ERWT91.311e-1830.58Glyoxylate/hydroxypyruvate reductase B OS=Erwinia ... [more]
DDH_HAEIN1.311e-1829.152-hydroxyacid dehydrogenase homolog OS=Haemophilus... [more]
GHRB_ECOL51.385e-1830.14Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
DHGY_HYPME1.712e-1829.44Glycerate dehydrogenase OS=Hyphomicrobium methylov... [more]
GHRB_SERP51.801e-1829.85Glyoxylate/hydroxypyruvate reductase B OS=Serratia... [more]
GHRB_ECOHS1.801e-1830.14Glyoxylate/hydroxypyruvate reductase B OS=Escheric... [more]
GHRB_YERPS2.235e-1830.85Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPP2.235e-1830.85Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPG2.235e-1830.85Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756567 ID=EY756567; Name=EY756567; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGGTCTGCG
TGAATGGCTGGAATCGAAAGGTCACCTATATCTTGTCACTGATGACAAAG
AGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCACGTCCTC
ATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGATTAAGAA
GGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATA
TTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACT
GGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAATCCTTAT
TCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTGGGGAAT
GGAATGTTGCCGGTGTTGCTTATAGAGCTTATGATCTTGAAGGAAAGACA
GTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCAACGACT
TAAACCTTTCAATTGTAATCTCCTTTATCATGACCGGGTGAAGATGGATC
CTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTAGATACT
ATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAACAGAAAA
GACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGAAGGGCG
TCTTGATTGTCAACAATGCTCGAGGAGCAATCATGGACACACAAGCTGTT
GTTGACGCTTGCTCTAGTGGACACATTGCAGGTTATAGTGGTGATGTTTG
AATCCACAACCAGCTCCAAGGGACATCCCTGGCGTTACATGCCAAATCAG
GCAATGACCCCTCATGTTTCTGGGACCACTANTGATGCACAGCTACGCTA
TGCTGCGGGAGTCAAG
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