EY756567

Overview
NameEY756567
Unique NameEY756567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_SHESA (Erythronate-4-phosphate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=pdxB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 50/196 (25.51%), Postives = 87/196 (44.39%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLT----EKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVV 753
            V A  +     L+ + +A +G+DH+DL      G+  +   G N  +V E   + +L L   F                       L+GK VG VG G  G    + L+ +   +L +D +K       E   +    L+T+L + DI+ ++ P+T     KT  +FD+ R+  +K    ++N  RG ++D QA++
Sbjct:   49 VNAALLDANSKLKFVGSATIGTDHVDLAYLAGRGIPFSNAPGCNATAVGEFAFIAMLELAARF--------------------NSPLKGKVVGIVGAGNTGSATAKCLEAYGIKVLLNDPIK-----AAEGDPRHFVSLETLLHEADIISLHVPITRTGEHKTLHLFDEARMMSLKPNTWLLNCCRGDVIDNQALI 219          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_VIBPA (Erythronate-4-phosphate dehydrogenase OS=Vibrio parahaemolyticus GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 50/195 (25.64%), Postives = 89/195 (45.64%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAV 750
            V AE I KA  L+ + TA  G DH+D       G+      G N V VAE     +++L +                     + + +  KTVG +G G++G  L + LK    N+L +     DP  ++    +    L  ++ + DI+ ++TP+T+     T  + D+  +  ++   +++N ARG ++D QA+
Sbjct:   49 VNAELISKANKLKFVGTATAGMDHVDQALLKEKGIFFTAAPGCNKVGVAEYAFSVMMVLAQQ--------------------QGFSVFDKTVGIIGAGQVGSYLEKCLKGMGINVLIN-----DPFKQEAGDPRSFTPLAELIEQSDIITLHTPITKDGLHPTHHLIDEKVLNGLRGDQILINAARGPVVDNQAL 218          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_SHESH (Erythronate-4-phosphate dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 47/186 (25.27%), Postives = 87/186 (46.77%), Query Frame = 1
Query:  208 NLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVV 753
            NL+ + +A +G+DHID +     G+      G N  +V E   + +L L + F                      +L+GK VG VG G  G  + + L+ +   +L +     DP +E +    F   L+ +  + D++ ++ PLT+    KT  +FD+ R+  +K    ++N  RG ++D +A++
Sbjct:   59 NLKFVGSATIGTDHIDQSYLASQGIPFTNAPGCNATAVGEFAFIAMLELAKRF--------------------DTELKGKVVGIVGAGNTGSAVAKCLEAYGVEVLLN-----DPLIEADDPRTF-VSLEALTERADVISLHVPLTKDGAHKTWYLFDEQRLQNLKPDTWLLNCCRGEVIDNRALI 218          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_PSEMY (Erythronate-4-phosphate dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 47/175 (26.86%), Postives = 80/175 (45.71%), Query Frame = 1
Query:  226 TAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAV 750
            T  +G+DH+DL+     G+  +   G N   V +  L  +L L                          D   +  G VG G++G  L+  L+     L +  RV  DP  +   G  F   L+ ++ +CD++ ++TPL   TR +FD  R+A ++ G  ++N +RGA++D  A+
Sbjct:   64 TCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGSVLTLAER--------------------EGVDPAARVYGVVGAGQVGGRLVHLLR----GLGWQVRV-CDPPRQAAEGGDFVS-LERIIEECDVISLHTPLDASTRHLFDATRLAALQPGAWLINASRGAVVDNAAL 212          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_KLEP3 (Erythronate-4-phosphate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 49/199 (24.62%), Postives = 89/199 (44.72%), Query Frame = 1
Query:  187 ERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 771
            E +   K ++ + TA  G+DH+D       G+  +   G N ++V E     +L+L                         + L  +TVG VG G +G  L +RL+      L  D     P+ E+     F   LD ++ + D++  +TPL +    KT+ + D+  I+++K G +++N  RG ++D  A++    +G
Sbjct:   51 EALLSGKAVKFVGTATAGTDHVDQAWLQQAGIGFSAAPGCNAIAVVEYVFSSLLMLAER--------------------DGFALRDRTVGIVGVGNVGGRLQKRLEALGIKTLLCD----PPRAERGDEGDF-RSLDALVQEADVLTFHTPLYKEGPYKTQHLADESLISRLKPGTILINACRGPVVDNAALLKRLEAG 224          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_SHIFL (Erythronate-4-phosphate dehydrogenase OS=Shigella flexneri GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 50/199 (25.13%), Postives = 87/199 (43.72%), Query Frame = 1
Query:  187 ERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 771
            E +   K ++ + TA  G+DH+D       G+  +   G N ++V E     +L+L                         + L  +TVG VG G +G+ L  RL+      L  D     P+ ++     F   LD ++ + DI+  +TPL +    KT  + D+  I  +K G +++N  RGA++D  A++   + G
Sbjct:   51 ESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAER--------------------DGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCD----PPRADRGDEGDF-RSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEG 224          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_SHIF8 (Erythronate-4-phosphate dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 50/199 (25.13%), Postives = 87/199 (43.72%), Query Frame = 1
Query:  187 ERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 771
            E +   K ++ + TA  G+DH+D       G+  +   G N ++V E     +L+L                         + L  +TVG VG G +G+ L  RL+      L  D     P+ ++     F   LD ++ + DI+  +TPL +    KT  + D+  I  +K G +++N  RGA++D  A++   + G
Sbjct:   51 ESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAER--------------------DGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCD----PPRADRGDEGDF-RSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEG 224          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_ENTS8 (Erythronate-4-phosphate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=pdxB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 50/193 (25.91%), Postives = 87/193 (45.08%), Query Frame = 1
Query:  205 KNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 771
            KN++ + TA  G+DH+D +     G+  +   G N ++V E     +L+L                         + L  +TVG VG G +G  L  RL+      L  D     P+ ++     F   LD ++ + DI+  +TPL +    KT  + D+  IA++K G +++N  RG ++D  A++    +G
Sbjct:   57 KNIRFVGTATAGTDHVDEDYLREAGVGFSAAPGCNAIAVVEYVFSALLMLAER--------------------DGFALTDRTVGIVGVGNVGSRLQARLEALGVRTLLCD----PPRADRGDSGDF-RTLDELVREADILTFHTPLFKEGPYKTLHLADEALIARLKPGAILINACRGPVVDNAALLARLEAG 224          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: LDHD_STRP1 (D-lactate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=ldhD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 54/245 (22.04%), Postives = 106/245 (43.27%), Query Frame = 1
Query:   49 REWLESKGHLYLVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAG 783
            ++W +  G    +T+    P  E  K       + +    P       + K   ++ +       D  +L+      + +  V   +  S+AE  +  +L L+R+       V    +   G+  R   L   TV  +G GRIG    +  K F C ++ +D  + D     +    ++E ++  +   D+V ++ P T +   +F+ D     KKG +++N ARGA+++TQ ++DA  +G ++G
Sbjct:   17 KKWADDNGIEISLTESPLTP--ETVKEAEGFDGIANAQIGPLDDAIYPLLKEMGIKQIAQHSASVDMYNLDLATENDIIITNVPSYSPESIAEFTVTIVLNLIRHVELIRENVKKQNFTW-GLPIRGRVLGDMTVAIIGTGRIGLATAKIFKGFGCKVVGYDIYQSDAA---KAVLDYKESVEEAIKDADLVSLHMPPTAENTHLFNSDLFKSFKKGAILMNMARGAVIETQDLLDALDAGLLSG 255          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: PDXB_SHIDS (Erythronate-4-phosphate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pdxB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 50/199 (25.13%), Postives = 87/199 (43.72%), Query Frame = 1
Query:  187 ERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTE----KTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSG 771
            E +   K ++ + TA  G+DH+D       G+  +   G N ++V E     +L+L                         + L  +TVG VG G +G+ L  RL+      L  D     P+ ++     F   LD ++ + DI+  +TPL +    KT  + D+  I  +K G +++N  RGA++D  A++   + G
Sbjct:   51 ESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAER--------------------DGFSLHERTVGIVGVGNVGRRLQARLEALGIKTLLCD----PPRADRGDEGDF-RSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEG 224          
The following BLAST results are available for this feature:
BLAST of EY756567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
PDXB_SHESA9.097e-1225.51Erythronate-4-phosphate dehydrogenase OS=Shewanell... [more]
PDXB_VIBPA1.552e-1125.64Erythronate-4-phosphate dehydrogenase OS=Vibrio pa... [more]
PDXB_SHESH1.552e-1125.27Erythronate-4-phosphate dehydrogenase OS=Shewanell... [more]
PDXB_PSEMY1.552e-1126.86Erythronate-4-phosphate dehydrogenase OS=Pseudomon... [more]
PDXB_KLEP31.552e-1124.62Erythronate-4-phosphate dehydrogenase OS=Klebsiell... [more]
PDXB_SHIFL2.027e-1125.13Erythronate-4-phosphate dehydrogenase OS=Shigella ... [more]
PDXB_SHIF82.027e-1125.13Erythronate-4-phosphate dehydrogenase OS=Shigella ... [more]
PDXB_ENTS82.027e-1125.91Erythronate-4-phosphate dehydrogenase OS=Enterobac... [more]
LDHD_STRP12.027e-1122.04D-lactate dehydrogenase OS=Streptococcus pyogenes ... [more]
PDXB_SHIDS2.647e-1125.13Erythronate-4-phosphate dehydrogenase OS=Shigella ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756567 ID=EY756567; Name=EY756567; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGGTCTGCG
TGAATGGCTGGAATCGAAAGGTCACCTATATCTTGTCACTGATGACAAAG
AGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCACGTCCTC
ATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGATTAAGAA
GGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATA
TTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACT
GGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAATCCTTAT
TCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTGGGGAAT
GGAATGTTGCCGGTGTTGCTTATAGAGCTTATGATCTTGAAGGAAAGACA
GTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCAACGACT
TAAACCTTTCAATTGTAATCTCCTTTATCATGACCGGGTGAAGATGGATC
CTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTAGATACT
ATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAACAGAAAA
GACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGAAGGGCG
TCTTGATTGTCAACAATGCTCGAGGAGCAATCATGGACACACAAGCTGTT
GTTGACGCTTGCTCTAGTGGACACATTGCAGGTTATAGTGGTGATGTTTG
AATCCACAACCAGCTCCAAGGGACATCCCTGGCGTTACATGCCAAATCAG
GCAATGACCCCTCATGTTTCTGGGACCACTANTGATGCACAGCTACGCTA
TGCTGCGGGAGTCAAG
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