EY756567

Overview
NameEY756567
Unique NameEY756567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: YPRB2_CORML (Uncharacterized protein in proB 3'region OS=Corynebacterium melassecola PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.733e-11
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 1 
Query:  439 EGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            + KTV  +G G IG  LL+ LKPFN   +  +      +   ET A   +  + +  + D+ V+  PLT+ T  + + + + KMK   ++VN  RG +++T  +VDA ++G IAG + DV
Sbjct:  125 DNKTVAILGAGGIGVRLLEMLKPFNVKTIAVNNSGRPVEGADETFAM--DKAEHVWAEADVFVLILPLTDATYQIVNAETLGKMKPSAVLVNVGRGPLINTDDLVDALNNGTIAGAALDV 242

HSP 2 Score: 21.1718 bits (43), Expect = 9.733e-11
Identity = 8/18 (44.44%), Postives = 10/18 (55.56%), Query Frame = 2 
Query:  824 HPWRYMPNQAMTPHVSGT 877
            HP   M N  +TPH + T
Sbjct:  252 HPLWEMDNVVITPHTANT 269
The following BLAST results are available for this feature:
BLAST of EY756567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
YPRB2_CORML9.733e-1133.33Uncharacterized protein in proB 3'region OS=Coryne... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756567 ID=EY756567; Name=EY756567; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGGTCTGCG
TGAATGGCTGGAATCGAAAGGTCACCTATATCTTGTCACTGATGACAAAG
AGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCACGTCCTC
ATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGATTAAGAA
GGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATA
TTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACT
GGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAATCCTTAT
TCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTGGGGAAT
GGAATGTTGCCGGTGTTGCTTATAGAGCTTATGATCTTGAAGGAAAGACA
GTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCAACGACT
TAAACCTTTCAATTGTAATCTCCTTTATCATGACCGGGTGAAGATGGATC
CTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTAGATACT
ATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAACAGAAAA
GACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGAAGGGCG
TCTTGATTGTCAACAATGCTCGAGGAGCAATCATGGACACACAAGCTGTT
GTTGACGCTTGCTCTAGTGGACACATTGCAGGTTATAGTGGTGATGTTTG
AATCCACAACCAGCTCCAAGGGACATCCCTGGCGTTACATGCCAAATCAG
GCAATGACCCCTCATGTTTCTGGGACCACTANTGATGCACAGCTACGCTA
TGCTGCGGGAGTCAAG
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