EY756567

Overview
NameEY756567
Unique NameEY756567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4)

HSP 1 Score: 112.464 bits (280), Expect = 3.561e-24
Identity = 69/207 (33.33%), Postives = 109/207 (52.66%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            VTA+ I  A+ LQ++  AG G D++DL      G+ V      N +S AE     I+ L R        +  G+W      +   +L GKT+G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ + +  A+ KKGV +VN ARG I+D  A++ A  SG  AG + DV
Sbjct:   59 VTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERK--KFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPI-ISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDV 261          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_PONAB (D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.650e-24
Identity = 71/221 (32.13%), Postives = 113/221 (51.13%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV*IHNQLQGTSLALH 840
            VTA+ I  A+ LQ++  AG G D++DL      G+ V      N +S AE     I+ L R        +  G+W      +   +L GKT+G +G GRIG+ +  R++      + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ + +  A+ KKGV +VN ARG I+D  A++ A  SG  AG + DV      +G +L  H
Sbjct:   59 VTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERK--KFMGTELNGKTLGILGLGRIGREVAIRMQSLGMKTIGYDPI-ISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRGRALVDH 275          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 4.650e-24
Identity = 69/207 (33.33%), Postives = 109/207 (52.66%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            VTA+ I  A+ LQ++  AG G D++DL      G+ V      N +S AE     I+ L R        +  G+W+     +   +L GKT+G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ +    A+ KKGV +VN ARG I+D  A++ A  SG  AG + DV
Sbjct:   59 VTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRK--KFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTVGYDPI-ISPEVAASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDV 261          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: DDH1_SCHPO (2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe GN=SPAC186.07c PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.650e-24
Identity = 77/210 (36.67%), Postives = 121/210 (57.62%), Query Frame = 1
Query:  178 VTAERIKK-AKN-LQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLK-PFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            V A+ +K  AKN  +L+     G +++DL      G+TV  V   +  +VAE  +  +L L R     + +V   ++N+ G+    +DL GKT+G +G GRIG L+ + LK  F C +L HD +K + +LEK  G +F E  + +L K D + ++ PLT  T  + D+  +A MKKGV I+N +RG ++DT+A+V A  SG + G + DV
Sbjct:   56 VDADTLKVLAKNGTKLIALRCAGFNNVDLKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLL--GHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHD-IKPNKELEK-FGIQFVEQQE-VLAKADFLCLHCPLTPDTEHLVDEKLLASMKKGVKIINTSRGGLVDTKALVKAIESGQVGGCAMDV 260          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_RAT (D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 1.036e-23
Identity = 68/207 (32.85%), Postives = 109/207 (52.66%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            VTA+ I  A+ LQ++  AG G D++DL      G+ V      N +S AE     ++ L R        +  G+W+     +   +L GKT+G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ +    A+ KKGV +VN ARG I+D  A++ A  SG  AG + DV
Sbjct:   59 VTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRK--KFMGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDPI-ISPEVAASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDV 261          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_PIG (D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.036e-23
Identity = 72/223 (32.29%), Postives = 111/223 (49.78%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV*IHNQLQGTSLALHAK 846
            VT++ I  AK LQ++  AG G D++DL      G+ V      N +S AE     IL L R        +  G+W      +   +L GK +G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ +    A  KKGV +VN ARG I+D  A++ A  SG  AG + DV      +  +L  H K
Sbjct:   59 VTSDVINAAKKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMILCLARQIPQATASMKDGKWERK--KFMGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDPI-IAPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDSTFALCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHEK 277          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.353e-23
Identity = 71/241 (29.46%), Postives = 122/241 (50.62%), Query Frame = 1
Query:   91 DDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYR-----AYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            +++E P   L + + D+  L++       +  E    A  L+++    VG D++D+      G+ V         + A+     +L   R  +       SGEW   G+A+       +D+ GKT+G +G GRIG+ + +R K F   +LY+ R +  P+ E+E  A+F+  L+ +L + D VV+  PLT++T  M  +  +  MK   ++VN ARG ++DT+A++ A   G IAG   DV
Sbjct:   30 EEREIPREVLLEKVRDVDALVT--MLSERIDGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRK-PEAEEELKAEFKP-LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDV 266          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_HAEIN (D-3-phosphoglycerate dehydrogenase OS=Haemophilus influenzae GN=serA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.690e-23
Identity = 69/229 (30.13%), Postives = 118/229 (51.53%), Query Frame = 1
Query:  115 ELEKHIPDLHVL-ISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            EL++ I D+H + + +  H   +TAE I+ A  L  +    +G++ +DLN     G+ V     SN  SVAE  L  IL+L+RN    + +V  G WN +     ++++ GK +G +G G IG  L    +    ++ ++D     P       AK    L+ +L  CD+V ++ P    T+ + +  RIA++K+G +++N ARG ++D  A+  A   G + G + DV
Sbjct:   47 ELKEAIKDVHFIGLRSRTH---LTAEMIEAAPKLIAVGCFCIGTNQVDLNAAKARGIPVFNAPFSNTRSVAELVLGEILLLMRNVPQANAEVHRGVWNKSATG--SHEVRGKKLGIIGYGHIGSQLSIIAESLGMDVYFYDIENKLPL----GNAKQVRSLEELLSSCDVVSLHVPELPSTKNLMNVARIAQLKQGAILINAARGTVVDIDALAQALKDGKLQGAAIDV 266          

HSP 2 Score: 26.5646 bits (57), Expect = 1.690e-23
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  827 PWRYMPNQAMTPHVSGTTXDAQ 892
            P R   N  +TPH+ G+T +AQ
Sbjct:  281 PLREFDNVILTPHIGGSTAEAQ 302          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_BOVIN (D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 2.308e-23
Identity = 67/207 (32.37%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  178 VTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV 798
            VT++ I  A+ LQ++  AG G D++DL      G+ V      N +S AE     I+ L R        +  G+W      +   +L GK +G +G GRIG+ +  R++ F    + +D + + P++    G + +  L+ + P CD + V+TPL   T G+ +    A+ KKGV +VN ARG I+D  A++ A  SG  AG + DV
Sbjct:   59 VTSDIINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWERK--KFMGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDPI-ISPEVSASFGVQ-QLPLEQIWPLCDFITVHTPLLPSTTGLLNDSTFAQCKKGVCVVNCARGGIVDEGALLRALQSGQCAGAALDV 261          
BLAST of EY756567 vs. ExPASy Swiss-Prot
Match: SERA_YEAST (D-3-phosphoglycerate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SER3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.801e-22
Identity = 71/234 (30.34%), Postives = 118/234 (50.43%), Query Frame = 1
Query:  106 PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDV*IH 807
            P+ EL + I D+H +         +T+  ++ AKNL  +    +G++ +DL+     G+ V     SN  SVAE  +  I+ L R       ++ +G WN   VA R +++ GKT+G +G G IG  L    +    ++LY+D V +   +   T A+    LD +L K D V ++ P T +T  M    + A MK G  ++N +RG ++D  +++ A  +  IAG + DV  H
Sbjct:   90 PEEELIEKIKDVHAIGIRS--KTRLTSNVLQHAKNLVCIGCFCIGTNQVDLDYATSRGIAVFNSPFSNSRSVAELVIAEIISLARQLGDRSIELHTGTWNK--VAARCWEVRGKTLGIIGYGHIGSQLSVLAEAMGLHVLYYDIVTI---MALGT-ARQVSTLDELLNKSDFVTLHVPATPETEKMLSAPQFAAMKDGAYVINASRGTVVDIPSLIQAVKANKIAGAALDVYPH 315          

HSP 2 Score: 26.9498 bits (58), Expect = 1.801e-22
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  839 MPNQAMTPHVSGTTXDAQ 892
            +PN  +TPH+ G+T +AQ
Sbjct:  339 LPNIILTPHIGGSTEEAQ 356          
The following BLAST results are available for this feature:
BLAST of EY756567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 231
Match NameE-valueIdentityDescription
SERA_MACFA3.561e-2433.33D-3-phosphoglycerate dehydrogenase OS=Macaca fasci... [more]
SERA_PONAB4.650e-2432.13D-3-phosphoglycerate dehydrogenase OS=Pongo abelii... [more]
SERA_MOUSE4.650e-2433.33D-3-phosphoglycerate dehydrogenase OS=Mus musculus... [more]
DDH1_SCHPO4.650e-2436.672-hydroxyacid dehydrogenase homolog 1 OS=Schizosac... [more]
SERA_RAT1.036e-2332.85D-3-phosphoglycerate dehydrogenase OS=Rattus norve... [more]
SERA_PIG1.036e-2332.29D-3-phosphoglycerate dehydrogenase OS=Sus scrofa G... [more]
GYAR_THEGJ1.353e-2329.46Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
SERA_HAEIN1.690e-2330.13D-3-phosphoglycerate dehydrogenase OS=Haemophilus ... [more]
SERA_BOVIN2.308e-2332.37D-3-phosphoglycerate dehydrogenase OS=Bos taurus G... [more]
SERA_YEAST1.801e-2230.34D-3-phosphoglycerate dehydrogenase 1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756567 ID=EY756567; Name=EY756567; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCAACTTTCTTGGTTGTGTGGAGGGAGGCTGTGGTCTGCG
TGAATGGCTGGAATCGAAAGGTCACCTATATCTTGTCACTGATGACAAAG
AGGGACCAGACTGTGAACTAGAGAAACATATTCCTGATCTCCACGTCCTC
ATATCTACCCCCTTCCACCCTGCCTATGTTACGGCGGAAAGGATTAAGAA
GGCCAAAAATTTGCAACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATA
TTGATCTAAATGCTGCTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACT
GGAAGCAATGTGGTTTCAGTTGCTGAGGACGAGCTTATGAGAATCCTTAT
TCTTGTCCGTAATTTCTTACCTGGACACCATCAAGTTATCAGTGGGGAAT
GGAATGTTGCCGGTGTTGCTTATAGAGCTTATGATCTTGAAGGAAAGACA
GTGGGAACTGTTGGTTGTGGACGCATTGGCAAGCTGTTGCTCCAACGACT
TAAACCTTTCAATTGTAATCTCCTTTATCATGACCGGGTGAAGATGGATC
CTCAATTGGAGAAAGAGACTGGAGCAAAATTTGAGGAGGATCTAGATACT
ATGCTTCCCAAATGTGACATAGTTGTTGTCAACACCCCTCTAACAGAAAA
GACGAGAGGGATGTTTGACAAAGATAGGATTGCAAAGATGAAGAAGGGCG
TCTTGATTGTCAACAATGCTCGAGGAGCAATCATGGACACACAAGCTGTT
GTTGACGCTTGCTCTAGTGGACACATTGCAGGTTATAGTGGTGATGTTTG
AATCCACAACCAGCTCCAAGGGACATCCCTGGCGTTACATGCCAAATCAG
GCAATGACCCCTCATGTTTCTGGGACCACTANTGATGCACAGCTACGCTA
TGCTGCGGGAGTCAAG
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