EY756561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 58/172 (33.72%), Postives = 79/172 (45.93%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSS-----------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGG-IFNPLNFAPTDEAKEK----ELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 479 ++ RWAML +G + E T + W DAGK E SS TL IE ++ Y+E +R ++ + + YPGG F+PL A K + E+ + RLAM+ FLGF VQ TGKGP N H+SDP H TI+ T S + Sbjct: 139 IHGRWAMLATLGAITVEWLTGV------TWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRL-----------------YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 59/157 (37.58%), Postives = 82/157 (52.23%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 102 IHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG---YRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGK-------AEYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ +K G+ W+ AG +Y + + ++ + +L +VE R P D I YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL HI+DP N Sbjct: 100 IHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDKI------------YPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVAN 252
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 59/168 (35.12%), Postives = 78/168 (46.43%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++SRWAMLG +G PE+ K G+ W+ AG ++ FA ++ + +L +VE R P DP+ YPGG F+PL A E K KEL NGRLAM + GF VQ VTGKGP +NL H++DP N Sbjct: 100 IHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAG-SQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG--GPLGEGLDPL------------YPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVAN 252
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16 Identity = 57/156 (36.54%), Postives = 80/156 (51.28%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ + G+ + G ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 102 IHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16 Identity = 58/157 (36.94%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ + G+ W+ G ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A EA K KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 99 IHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKG-SQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 251
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.589e-16 Identity = 58/167 (34.73%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKA-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+F + G+ W AG +Y + S ++ + +L VE ++ P V DP+ YPGG F+PL A EA K KE NGRLAM + GF +Q VTGKGP ENL H+ DP +N Sbjct: 102 IHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVE--GYRVAGGPLGVVVDPL------------YPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNN 254
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16 Identity = 58/157 (36.94%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A EA K K + NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 102 IHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 254
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16 Identity = 58/157 (36.94%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGI-INAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 ++ RW MLG +G + PE+F + G+ W+ AG ++ F ++ L H I W + G+V ++ P EV YPGG F+PL A EA + KE+ NGRLAM + GF VQ VTGKGP ENL H++DP +N Sbjct: 101 IHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAG-SQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 253
BLAST of EY756561 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15 Identity = 58/165 (35.15%), Postives = 82/165 (49.70%), Query Frame = 3 Query: 12 VNSRWAMLGVVGMLLPEVFTKIGIIN--APQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK------------NPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHN 452 +++RWA+LG +G+L PE+ ++ + P W+ AG A+ FA ++ L H I ++ N GS + L + YPGG F+PL A E K KE+ NGRLAM + LGF VQ VTGKGP +NL H++DP N Sbjct: 85 IHARWALLGALGILTPELLSQYAGVQFGEPVWFKAG-AQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGS--------EGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVN 240 The following BLAST results are available for this feature:
BLAST of EY756561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756561 ID=EY756561; Name=EY756561; organism=Citrus sinensis; type=EST; length=651bpback to top |