EY756559

Overview
NameEY756559
Unique NameEY756559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:313..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_ARCLA (Ferredoxin OS=Arctium lappa PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.544e-24
Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLPYSCRAG+CSSC GKV +G+VDQS+ S+LDDDQM  G+VLTC AYPTSDVTIETHKEEEL
Sbjct:   34 DLPYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSDVTIETHKEEEL 95          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_DUNSA (Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.544e-24
Identity = 50/63 (79.37%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLPYSCRAGACSSC GKV +GT+DQS+QSFLDDDQ G GFVLTC AY TSD TI TH+EE L
Sbjct:   32 LDLPYSCRAGACSSCAGKVEAGTIDQSDQSFLDDDQQGRGFVLTCVAYATSDCTISTHQEESL 94          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLPYSCRAG+CSSC GK+ +G+VDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL
Sbjct:   34 DLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_NOSMU (Ferredoxin OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 48/62 (77.42%), Postives = 57/62 (91.94%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP+SCRAGACS+C GK++SGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDV I+THKEE+L
Sbjct:   37 DLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 229
            +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEE L G
Sbjct:   34 ELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALTG 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_CHLFU (Ferredoxin OS=Chlorella fusca PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLPYSCRAGACSSC GKV SG VDQS+QSFLDD QMG+GFVLTC AYPTSDVTI TH+E  L
Sbjct:   31 LDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSDVTILTHQEAAL 93          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_ANASP (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=petF PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 48/62 (77.42%), Postives = 57/62 (91.94%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP+SCRAGACS+C GK++SGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDV I+THKEE+L
Sbjct:   37 DLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_ANASO (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=petF PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 9.853e-24
Identity = 48/62 (77.42%), Postives = 57/62 (91.94%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP+SCRAGACS+C GK++SGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDV I+THKEE+L
Sbjct:   37 DLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_MARPO (Ferredoxin OS=Marchantia polymorpha PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.287e-23
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            L LPYSCRAGACSSC GKV +G VDQS++SFLDDDQM EG+VLTC AYPTSD+TI+TH+EE L
Sbjct:   32 LSLPYSCRAGACSSCAGKVTAGEVDQSDESFLDDDQMDEGYVLTCIAYPTSDLTIDTHQEEAL 94          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_EUGVI (Ferredoxin OS=Euglena viridis PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.287e-23
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACSSCTG V  GTVDQS+QSFLDDDQM +GF LTC  YPTS+ TIETHKE++L
Sbjct:   33 IDLPYSCRAGACSSCTGIVKEGTVDQSDQSFLDDDQMAKGFCLTCTTYPTSNCTIETHKEDDL 95          
The following BLAST results are available for this feature:
BLAST of EY756559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_ARCLA7.544e-2480.65Ferredoxin OS=Arctium lappa PE=1 SV=1[more]
FER2_DUNSA7.544e-2479.37Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1[more]
FER_SOLAB9.853e-2477.42Ferredoxin OS=Solanum abutiloides PE=1 SV=1[more]
FER_NOSMU9.853e-2477.42Ferredoxin OS=Nostoc muscorum PE=1 SV=2[more]
FER_LYCCN9.853e-2476.56Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER_CHLFU9.853e-2482.54Ferredoxin OS=Chlorella fusca PE=1 SV=1[more]
FER1_ANASP9.853e-2477.42Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=... [more]
FER1_ANASO9.853e-2477.42Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=... [more]
FER_MARPO1.287e-2377.78Ferredoxin OS=Marchantia polymorpha PE=1 SV=1[more]
FER_EUGVI1.287e-2377.78Ferredoxin OS=Euglena viridis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756559 ID=EY756559; Name=EY756559; organism=Citrus sinensis; type=EST; length=509bp
TTCGTCGACCCACGCGTCCGGCTGAAGAATTGCGCTTGATCTTCCGTACT
CATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTCCTGTCTGGA
ACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGA
AGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAG
AGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATC
TCATTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATTATTTTAAT
GCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAATGTGTTT
TTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAATGCGCAT
CGTACCTAGAGGGTGAGGTTTCTCATCCCATCCGAACATGGTACCGTTCT
ATAATTAAGAGTCAAGCAAGAACAATGGATCTTTCGTTGTATTTCAAAAA
AAAAAAAAA
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