EY756559

Overview
NameEY756559
Unique NameEY756559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:313..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_RHOPL (Ferredoxin OS=Rhodymenia palmata PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.204e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C G V  GTVDQS+QSFLDDDQ+ + FVLTC AYPTSD  I+TH+EE+L
Sbjct:   34 IDLPYSCRAGACSTCAGIVELGTVDQSDQSFLDDDQLNDSFVLTCVAYPTSDCQIKTHQEEKL 96          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.204e-21
Identity = 43/63 (68.25%), Postives = 55/63 (87.30%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C GK++ G+VDQS+QSFLD++Q+  GF+LTC AYPTSD  I+TH+EE L
Sbjct:   34 VDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.573e-21
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            ++LPYSCRAGACS+C GKV  GTVDQ++QSFLDDDQ+  G+VLTC AYP+SD TI TH E+EL
Sbjct:   36 IELPYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPSSDCTISTHVEQEL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_ODOSI (Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.573e-21
Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            ++LPYSCRAGACS+C GKV  G +DQSEQ+FLDDDQ+G GFVLTC AYP SD T+  H+E+EL
Sbjct:   36 IELPYSCRAGACSTCAGKVTEGDIDQSEQTFLDDDQVGAGFVLTCIAYPKSDCTVLVHQEDEL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.055e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            ++LPYSCRAGACS+C GKV  GTVDQS+QSFLDD+QM +G+VLTC AYP SD TI TH E+EL
Sbjct:   35 IELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQEL 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_PANGI (Ferredoxin OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.055e-21
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 2
Query:   29 IALDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            I +DLPYSCRAG+CSSC GKV+SG VD S+ SFL+DD M  G+VLTC AY  SDV IETHKEEE+
Sbjct:   32 IGIDLPYSCRAGSCSSCAGKVVSGKVDNSDNSFLNDDNMDAGYVLTCHAYANSDVVIETHKEEEV 96          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_MEDSA (Ferredoxin OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.683e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 2
Query:   41 LPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LPYSCRAG+CSSC GKV +G V+QS+ SFLDDDQ+ EG+VLTC AY  SDVTIETHKEEEL
Sbjct:   35 LPYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGWVLTCVAYAKSDVTIETHKEEEL 95          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLP+SCRAGACS+C GK+L G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I T++EEEL
Sbjct:   35 LDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLP+SCRAGACS+C GK+L G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I T++EEEL
Sbjct:   35 LDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.577e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLP+SCRAGACS+C GK+L G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I T++EEEL
Sbjct:   35 LDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97          
The following BLAST results are available for this feature:
BLAST of EY756559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_RHOPL1.204e-2173.02Ferredoxin OS=Rhodymenia palmata PE=1 SV=1[more]
FER2_CYACA1.204e-2168.25Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER_PORYE1.573e-2171.43Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1[more]
FER_ODOSI1.573e-2169.84Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2[more]
FER_PORUM2.055e-2173.02Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV... [more]
FER_PANGI2.055e-2170.77Ferredoxin OS=Panax ginseng PE=1 SV=1[more]
FER_MEDSA2.683e-2177.05Ferredoxin OS=Medicago sativa PE=1 SV=1[more]
FER_THEVL4.577e-2173.02Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=pe... [more]
FER_THEEB4.577e-2173.02Ferredoxin-1 OS=Thermosynechococcus elongatus (str... [more]
FER_SYNEN4.577e-2173.02Ferredoxin-1 OS=Synechococcus elongatus naegeli GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756559 ID=EY756559; Name=EY756559; organism=Citrus sinensis; type=EST; length=509bp
TTCGTCGACCCACGCGTCCGGCTGAAGAATTGCGCTTGATCTTCCGTACT
CATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTCCTGTCTGGA
ACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGA
AGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAG
AGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATC
TCATTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATTATTTTAAT
GCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAATGTGTTT
TTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAATGCGCAT
CGTACCTAGAGGGTGAGGTTTCTCATCCCATCCGAACATGGTACCGTTCT
ATAATTAAGAGTCAAGCAAGAACAATGGATCTTTCGTTGTATTTCAAAAA
AAAAAAAAA
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