EY756559

Overview
NameEY756559
Unique NameEY756559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:313..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_EQUTE (Ferredoxin-2 OS=Equisetum telmateia PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.978e-21
Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP SC+AGACS+C GK++SGTVDQSE SFLDD+Q+ +G+VLTC A P SDV IETHKE+EL
Sbjct:   32 DLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESDVVIETHKEDEL 93          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_EQUAR (Ferredoxin-2 OS=Equisetum arvense PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.978e-21
Identity = 45/62 (72.58%), Postives = 54/62 (87.10%), Query Frame = 2
Query:   38 DLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            DLP SC+AGACS+C GK++SGTVDQSE SFLDD+Q+ +G+VLTC A P SDV IETHKE+EL
Sbjct:   32 DLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESDVVIETHKEDEL 93          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.020e-20
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 2
Query:   26 RIALDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            R  +DLPYSCRAGACSSC G + +G VDQS+QSFLDD Q+ +GFVLTC AYP SD  I TH+EE +
Sbjct:   80 RAGMDLPYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_PORPU (Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20
Identity = 44/63 (69.84%), Postives = 54/63 (85.71%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            ++LPYSCRAGACS+C GKV  G+VDQS+QSFLDD+Q+ +G+VLTC AYP SD TI TH E+EL
Sbjct:   36 IELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYPESDCTILTHVEQEL 98          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER_APHSA (Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.739e-20
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            LDLPYSCRAGACS+C GK++SG     +QSFLDDDQ+  G++LTC AYPT D  IETHKEE L
Sbjct:   34 LDLPYSCRAGACSTCAGKLVSGPAPDEDQSFLDDDQIQAGYILTCVAYPTGDCVIETHKEEAL 96          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.060e-20
Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C G+++ G VDQSE SFL+DD   +GFVLTC AYP SD  I THKE EL
Sbjct:   35 VDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER2_NOSMU (Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.472e-19
Identity = 42/64 (65.62%), Postives = 53/64 (82.81%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 226
            LDLP+SCR+G+CSSC G +  GTVDQS+Q+FLDDDQ+  G VLTC AYPTS+  IETH+E+ +A
Sbjct:   36 LDLPFSCRSGSCSSCNGILKKGTVDQSDQNFLDDDQIAAGNVLTCVAYPTSNCEIETHREDAIA 99          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.923e-19
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            ++LPYSCRAGACS+C GK+ SG+VDQS+ SFLDD Q  EG+VLTC +YP SD  I THKE +L
Sbjct:   89 VELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDL 151          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.923e-19
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C G+++SG VDQS+ SFL+D  + +G+VLTC AYP SD  I THKE EL
Sbjct:   92 VDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154          
BLAST of EY756559 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.923e-19
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 2
Query:   35 LDLPYSCRAGACSSCTGKVLSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 223
            +DLPYSCRAGACS+C GK+  G VDQS+ SFL+D    +G+VLTC AYP SD+ I THKEEEL
Sbjct:   35 VDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEEL 97          
The following BLAST results are available for this feature:
BLAST of EY756559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER2_EQUTE5.978e-2172.58Ferredoxin-2 OS=Equisetum telmateia PE=1 SV=1[more]
FER2_EQUAR5.978e-2172.58Ferredoxin-2 OS=Equisetum arvense PE=1 SV=1[more]
FER_PHYPA1.020e-2066.67Ferredoxin, chloroplastic OS=Physcomitrella patens... [more]
FER_PORPU1.332e-2069.84Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2[more]
FER_APHSA1.739e-2068.25Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2[more]
FER2_RAPSA5.060e-2068.25Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=... [more]
FER2_NOSMU1.472e-1965.63Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2[more]
FER3_MAIZE1.923e-1966.67Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE... [more]
FER3_ARATH1.923e-1965.08Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
FER1_RAPSA1.923e-1966.67Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-A03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756559 ID=EY756559; Name=EY756559; organism=Citrus sinensis; type=EST; length=509bp
TTCGTCGACCCACGCGTCCGGCTGAAGAATTGCGCTTGATCTTCCGTACT
CATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAGTCCTGTCTGGA
ACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGA
AGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAG
AGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATC
TCATTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATTATTTTAAT
GCTTTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAATGTGTTT
TTATTTCTTGTTGCAAAGAAGTTGTAATTGCACCGGCCATGAATGCGCAT
CGTACCTAGAGGGTGAGGTTTCTCATCCCATCCGAACATGGTACCGTTCT
ATAATTAAGAGTCAAGCAAGAACAATGGATCTTTCGTTGTATTTCAAAAA
AAAAAAAAA
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