EY756553

Overview
NameEY756553
Unique NameEY756553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISW6 (50S ribosomal protein L2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3
Query:   24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +P K + R ++ ++ G  +  K    H  G    Q+R +DF      + G VA I +DP R A +A + +        +K   IAA+G+  GQ +Y G +A + +GN L ++ IP G VV N+E   G  G L R++G  A ++    +     ++L SG  ++I + CRA IGQV   G  +  L+  G A   ++  KR   P VRG  MNP +HPHGG
Sbjct:   28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISMO (50S ribosomal protein L2 OS=Listeria monocytogenes GN=rplB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3
Query:   24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +P K + R ++ ++ G  +  K    H  G    Q+R +DF      + G VA I +DP R A +A + +        +K   IAA+G+  GQ +Y G +A + VGN L ++ IP G V+ N+E   G  G L R++G  A ++    +     ++L SG  ++I + CRA IGQV   G  +  L+  G A   ++  KR   P VRG  MNP +HPHGG
Sbjct:   28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISMF (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3
Query:   24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +P K + R ++ ++ G  +  K    H  G    Q+R +DF      + G VA I +DP R A +A + +        +K   IAA+G+  GQ +Y G +A + VGN L ++ IP G V+ N+E   G  G L R++G  A ++    +     ++L SG  ++I + CRA IGQV   G  +  L+  G A   ++  KR   P VRG  MNP +HPHGG
Sbjct:   28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISMC (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3
Query:   24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +P K + R ++ ++ G  +  K    H  G    Q+R +DF      + G VA I +DP R A +A + +        +K   IAA+G+  GQ +Y G +A + VGN L ++ IP G V+ N+E   G  G L R++G  A ++    +     ++L SG  ++I + CRA IGQV   G  +  L+  G A   ++  KR   P VRG  MNP +HPHGG
Sbjct:   28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISIN (50S ribosomal protein L2 OS=Listeria innocua GN=rplB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3
Query:   24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +P K + R ++ ++ G  +  K    H  G    Q+R +DF      + G VA I +DP R A +A + +        +K   IAA+G+  GQ +Y G +A + VGN L ++ IP G V+ N+E   G  G L R++G  A ++    +     ++L SG  ++I + CRA IGQV   G  +  L+  G A   ++  KR   P VRG  MNP +HPHGG
Sbjct:   28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_CHLT3 (50S ribosomal protein L2 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rplB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 82/269 (30.48%), Postives = 128/269 (47.58%), Query Frame = 3
Query:    6 RPAQSLS-PSKEMGRVIRAQRKGAGSVFKSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLKXQLL 791
            +P +SL  P+K  G      R   G V   H    H++    +R +DF      +   VA I +DP R A +A +++        +K   +A  G+  G  + CG +A + VGN LP+++IP G  V N+E   G  G +AR++G YAV+++   + D   +K+PSG  + +   C+A +G +   G  E   L  G A       R+ W    P+ RG+AMNPV+HP GG   +           +P GQK   +  RK      +L+
Sbjct:   28 KPEKSLLVPNKSTGG-----RNNNGRVTSRHMGGGHKR---YYRIIDFKRNKDGIPAKVATIEYDPNRTARIALLSYADG-----EKRYILAPNGIKVGDLIECGPEADIKVGNALPLKNIPVGIEVHNIEMRPGKGGQMARSAGSYAVLVA--KEGDYATLKMPSGELRKVRVECKATVGVI---GNLEHENLSLGKA------GRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQKSKGLKTRKRKKASSKLI 272          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 69/210 (32.86%), Postives = 102/210 (48.57%), Query Frame = 3
Query:   66 KGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677
            KG  S       HR G  +  +R +DF     Y+ G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  G LARA+G  A +I+   +  +  +KLPSG  ++I   C A +GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGG
Sbjct:   39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 232          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23
Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 3
Query:   48 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677
            +I A+ +G G        H++    +R +DF     Y+ G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+  +P G  + N+E  +G  G LARA+G  A +I+   +  +  +KLPSG  ++I   C A +GQV   G  +K L +AG+          CW    P VRGV MNPV+HPHGG
Sbjct:   46 IITARHRGGG--------HKR---LYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 232          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SALTY (50S ribosomal protein L2 OS=Salmonella typhimurium GN=rplB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SALTI (50S ribosomal protein L2 OS=Salmonella typhi GN=rplB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241          
The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_LISW61.711e-2333.9450S ribosomal protein L2 OS=Listeria welshimeri se... [more]
RL2_LISMO1.711e-2333.9450S ribosomal protein L2 OS=Listeria monocytogenes... [more]
RL2_LISMF1.711e-2333.9450S ribosomal protein L2 OS=Listeria monocytogenes... [more]
RL2_LISMC1.711e-2333.9450S ribosomal protein L2 OS=Listeria monocytogenes... [more]
RL2_LISIN1.711e-2333.9450S ribosomal protein L2 OS=Listeria innocua GN=rp... [more]
RL2_CHLT31.711e-2330.4850S ribosomal protein L2 OS=Chloroherpeton thalass... [more]
RK2_POPTR1.711e-2332.8650S ribosomal protein L2, chloroplastic OS=Populus... [more]
RK2B_POPAL1.711e-2331.7850S ribosomal protein L2-B, chloroplastic OS=Popul... [more]
RL2_SALTY2.235e-2334.3850S ribosomal protein L2 OS=Salmonella typhimurium... [more]
RL2_SALTI2.235e-2334.3850S ribosomal protein L2 OS=Salmonella typhi GN=rp... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTCAGTCTCTTTCGCCCTCTAAAGAAATGGGTCGTGTG
ATTCGCGCACAGCGTAAGGGTGCAGGTTCGGTCTTCAAGTCCCACACCCA
CCACCGTAAGGGTCCGGCCCAGTTCCGCAGCCTCGACTTCGGTGAGCGTA
ATGGTTACCTCAAGGGTGTCGTCGCAGAGATTATTCACGATCCGGGTCGT
GGTGCCCCGCTGGCCCGAGTTACCTTTCGTCACCCTTTTCGCTACATGAA
ACAAAAGGAGCTTTTCATTGCCGCCGAGGGTATGTACACGGGTCAGTTCG
TGTACTGCGGCAAGAAAGCCACTCTGATGGTTGGTAATGTGTTGCCCGTT
AGATCTATCCCTGAAGGAGCTGTCGTTTGCAACGTTGAGCATCATGTTGG
TGATCGCGGTGTTCTCGCTAGAGCTTCTGGTGATTATGCCGTTATCATCA
GTCATAACCCCGATAATGACACCACCAGGGTCAAGCTTCCATCTGGTGCC
AAAAAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGGTTGCCGG
CGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACA
AATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCAGTGGAGCATCCTCATGGAGGANGTAACCACCAGCACATTGGTCA
TGCTAGCACTGNTANGCGTGATGCTCCCCCTGGCCAGAAGGTTGGTCTTA
TTGCAGCCAGGAAGACTGGTCNGCTCAAANGACAGCTGCTGCCACTGCAN
GCAAGGGCGACAGGCTAAANTCTTTGTGTTACACAATCGTCTTTTATCGC
GATCTGGATTTTACTTTCCTGCTGATCATACCTGGAAAAATTGTTCAGAT
T
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