EY756553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISW6 (50S ribosomal protein L2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677 +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + +GN L ++ IP G VV N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGG Sbjct: 28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISMO (50S ribosomal protein L2 OS=Listeria monocytogenes GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677 +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGG Sbjct: 28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISMF (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677 +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGG Sbjct: 28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISMC (50S ribosomal protein L2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677 +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGG Sbjct: 28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_LISIN (50S ribosomal protein L2 OS=Listeria innocua GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 75/221 (33.94%), Postives = 114/221 (51.58%), Query Frame = 3 Query: 24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVKRNCWPKVRGVAMNPVEHPHGG 677 +P K + R ++ ++ G + K H G Q+R +DF + G VA I +DP R A +A + + +K IAA+G+ GQ +Y G +A + VGN L ++ IP G V+ N+E G G L R++G A ++ + ++L SG ++I + CRA IGQV G + L+ G A ++ KR P VRG MNP +HPHGG Sbjct: 28 TPEKSLLRPLK-KKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADG-----EKRYIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVL--GKEGKYVLIRLNSGEVRMILATCRATIGQV---GNEQHELINIGKAGRSRWMGKR---PTVRGSVMNPNDHPHGG 234
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_CHLT3 (50S ribosomal protein L2 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rplB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 82/269 (30.48%), Postives = 128/269 (47.58%), Query Frame = 3 Query: 6 RPAQSLS-PSKEMGRVIRAQRKGAGSVFKSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLKXQLL 791 +P +SL P+K G R G V H H++ +R +DF + VA I +DP R A +A +++ +K +A G+ G + CG +A + VGN LP+++IP G V N+E G G +AR++G YAV+++ + D +K+PSG + + C+A +G + G E L G A R+ W P+ RG+AMNPV+HP GG + +P GQK + RK +L+ Sbjct: 28 KPEKSLLVPNKSTGG-----RNNNGRVTSRHMGGGHKR---YYRIIDFKRNKDGIPAKVATIEYDPNRTARIALLSYADG-----EKRYILAPNGIKVGDLIECGPEADIKVGNALPLKNIPVGIEVHNIEMRPGKGGQMARSAGSYAVLVA--KEGDYATLKMPSGELRKVRVECKATVGVI---GNLEHENLSLGKA------GRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQKSKGLKTRKRKKASSKLI 272
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 69/210 (32.86%), Postives = 102/210 (48.57%), Query Frame = 3 Query: 66 KGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677 KG S HR G + +R +DF Y+ G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGG Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 232
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 3 Query: 48 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGG 677 +I A+ +G G H++ +R +DF Y+ G + I +DP R A + + + +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGG Sbjct: 46 IITARHRGGG--------HKR---LYRKIDFRRNEKYIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGAIIGDTIISGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGG 232
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SALTY (50S ribosomal protein L2 OS=Salmonella typhimurium GN=rplB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23 Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SALTI (50S ribosomal protein L2 OS=Salmonella typhi GN=rplB PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.235e-23 Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698 +R +DF + VV + +DP R A +A V ++ ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGG ++ G Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241 The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bpback to top |