EY756553

Overview
NameEY756553
Unique NameEY756553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SHIBS (50S ribosomal protein L2 OS=Shigella boydii serotype 4 (strain Sb227) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SHIB3 (50S ribosomal protein L2 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ESCF3 (50S ribosomal protein L2 OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOUT (50S ribosomal protein L2 OS=Escherichia coli (strain UTI89 / UPEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOSM (50S ribosomal protein L2 OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOSE (50S ribosomal protein L2 OS=Escherichia coli (strain SE11) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOLU (50S ribosomal protein L2 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOLI (50S ribosomal protein L2 OS=Escherichia coli (strain K12) GN=rplB PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOLC (50S ribosomal protein L2 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
[Close]
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECOL6 (50S ribosomal protein L2 OS=Escherichia coli O6 GN=rplB PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3 
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_SHIBS3.812e-2334.3850S ribosomal protein L2 OS=Shigella boydii seroty... [more]
RL2_SHIB33.812e-2334.3850S ribosomal protein L2 OS=Shigella boydii seroty... [more]
RL2_ESCF33.812e-2334.3850S ribosomal protein L2 OS=Escherichia fergusonii... [more]
RL2_ECOUT3.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli (stra... [more]
RL2_ECOSM3.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli (stra... [more]
RL2_ECOSE3.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli (stra... [more]
RL2_ECOLU3.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli O17:K... [more]
RL2_ECOLI3.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli (stra... [more]
RL2_ECOLC3.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli (stra... [more]
RL2_ECOL63.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli O6 GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTCAGTCTCTTTCGCCCTCTAAAGAAATGGGTCGTGTG
ATTCGCGCACAGCGTAAGGGTGCAGGTTCGGTCTTCAAGTCCCACACCCA
CCACCGTAAGGGTCCGGCCCAGTTCCGCAGCCTCGACTTCGGTGAGCGTA
ATGGTTACCTCAAGGGTGTCGTCGCAGAGATTATTCACGATCCGGGTCGT
GGTGCCCCGCTGGCCCGAGTTACCTTTCGTCACCCTTTTCGCTACATGAA
ACAAAAGGAGCTTTTCATTGCCGCCGAGGGTATGTACACGGGTCAGTTCG
TGTACTGCGGCAAGAAAGCCACTCTGATGGTTGGTAATGTGTTGCCCGTT
AGATCTATCCCTGAAGGAGCTGTCGTTTGCAACGTTGAGCATCATGTTGG
TGATCGCGGTGTTCTCGCTAGAGCTTCTGGTGATTATGCCGTTATCATCA
GTCATAACCCCGATAATGACACCACCAGGGTCAAGCTTCCATCTGGTGCC
AAAAAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGGTTGCCGG
CGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACA
AATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCAGTGGAGCATCCTCATGGAGGANGTAACCACCAGCACATTGGTCA
TGCTAGCACTGNTANGCGTGATGCTCCCCCTGGCCAGAAGGTTGGTCTTA
TTGCAGCCAGGAAGACTGGTCNGCTCAAANGACAGCTGCTGCCACTGCAN
GCAAGGGCGACAGGCTAAANTCTTTGTGTTACACAATCGTCTTTTATCGC
GATCTGGATTTTACTTTCCTGCTGATCATACCTGGAAAAATTGTTCAGAT
T
back to top