EY756553

Overview
NameEY756553
Unique NameEY756553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECO55 (50S ribosomal protein L2 OS=Escherichia coli (strain 55989 / EAEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECO45 (50S ribosomal protein L2 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECO27 (50S ribosomal protein L2 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_ECO24 (50S ribosomal protein L2 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rplB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 66/192 (34.38%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG A       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_AGGAC (50S ribosomal protein L2 OS=Aggregatibacter actinomycetemcomitans GN=rplB PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 68/193 (35.23%), Postives = 102/193 (52.85%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      + GVV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A + VGN LP+R+IP G+ V NVE   G  G +AR++G Y  II+   +  T R++  SG  + + + C A IG+V       + L KAG N +   R      P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLAAGDQIQAGAHAPIKVGNALPMRNIPVGSTVHNVELKPGKGGQIARSAGSYVQIIAREGNYVTLRLR--SGEMRKVLAECSATIGEVGNSEHMLRVLGKAGANRWRGVR------PTVRGTAMNPVDHPHGGGEGRNFG 241          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_PINKO (50S ribosomal protein L2, chloroplastic OS=Pinus koraiensis GN=rpl2 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 71/210 (33.81%), Postives = 110/210 (52.38%), Query Frame = 3
Query:   48 VIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +I A+ +G G        H++    +R +DF     ++ G +  I +DP R A + +V +++       K   +   G+  G  +  G KA + +GNVLP+ ++P G  + N+E  +G  G LARA+G  A +I+    + T R  LPSG  ++I   C A IGQV       +   KAG    ++  KR+   +VRGVAMNPV+HPHGG
Sbjct:   49 IITARHRGGG--------HKR---LYRQIDFRRDKEHISGEIVTIEYDPNRSAYICKVHYKNG-----DKMYILHPRGVMIGDTILSGPKAPISIGNVLPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEDRSATLR--LPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGG 235          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_PICAB (50S ribosomal protein L2, chloroplastic OS=Picea abies GN=rpl2 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 75/223 (33.63%), Postives = 114/223 (51.12%), Query Frame = 3
Query:   21 LSPSKEM--GRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            L P K++  G+     R G G +      HR G  +  +R +DF     ++ G +  I +DP R A + +V +++       K   +   G+  G  +  G KA + +GN LP+ ++P G  + N+E  +G  G LARA+G  A +I+    + T R  LPSG  ++I   C A IGQV       +   KAG    ++  KR+   +VRGVAMNPV+HPHGG
Sbjct:   27 LDPQKKLTSGQHHCGSRNGRGIIT---ARHRGGGHKRLYRQIDFRRDKEHISGKIVTIEYDPNRSAYICKVHYKNG-----DKMYILHPRGVMIGDTILSGPKAPISIGNALPLTNMPLGTAIHNIEITLGKGGQLARAAGAVAELIAKEDRSATLR--LPSGEVRLISENCSATIGQVGNITANNRSFGKAG--AKRWLGKRS---EVRGVAMNPVDHPHGG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_PELHO (50S ribosomal protein L2, chloroplastic OS=Pelargonium hortorum GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23
Identity = 69/194 (35.57%), Postives = 101/194 (52.06%), Query Frame = 3
Query:  102 HRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            HR G  +  +R +DF      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LP+ +IP G  + N+E  +G  G LARA+G  A +IS   +  +  VKLPSG  ++I   C A +GQV   G   K L +AG+   ++  KR   P VRGVAMNPV+HPHGG
Sbjct:   51 HRGGGHKRLYRQIDFRRNENNIYGRIVTIEYDPNRNAYICLIHYGDG-----EKRYILHPRGARIGDTIVSGTEVPIKMGNALPLTNIPLGTAIHNIEITLGKGGQLARAAGAVAKLIS--KEGKSAAVKLPSGEVRLISQNCSATVGQVGNVGVNRKSLGRAGS--KRWLGKR---PVVRGVAMNPVDHPHGG 232          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RK2_CYCTA (50S ribosomal protein L2, chloroplastic OS=Cycas taitungensis GN=rpl2 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23
Identity = 72/220 (32.73%), Postives = 111/220 (50.45%), Query Frame = 3
Query:   24 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGG 677
            +P K++        KG  S       HR G  +  +R +DF     Y+ G +  I +DP R A +  V +        +K+  +   G+  G  +  G +A + +GN LP+  +P G  + ++E  +G  G LARA+G  A +I+   +  +T ++LPSG  ++I   C A IGQV         L KAG+   ++  KR   P+VRGV MNPV+HPHGG
Sbjct:   28 NPQKKLTSGQHRCGKGRNSRGIITARHRGGGHKRLYRQIDFQRNEKYIFGEIVTIEYDPNRSAYICLVHYGDG-----EKKYILHPRGVIIGDTITSGPRAPISIGNALPLTDVPLGTAIHSIEITLGKGGQLARAAGAVAELIA--KEGRSTTLRLPSGEIRLISENCSATIGQVGNVNANNGTLGKAGS--KRWLGKR---PRVRGVVMNPVDHPHGG 235          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_YEREN (50S ribosomal protein L2 OS=Yersinia enterocolitica GN=rplB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.502e-23
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  123 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIG 698
            +R +DF      +  VV  + +DP R A +A V ++       ++   +A +G+  G  +  G  A +  GN LP+R+IP G+ V NVE   G  G LAR++G Y  I++   D     ++L SG  + + + CRA +G+V       + L KAG +       R   P VRG AMNPV+HPHGG   ++ G
Sbjct:   62 YRLVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVLADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241          
The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_ECO553.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli (stra... [more]
RL2_ECO453.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli O45:K... [more]
RL2_ECO273.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli O127:... [more]
RL2_ECO243.812e-2334.3850S ribosomal protein L2 OS=Escherichia coli O139:... [more]
RL2_AGGAC3.812e-2335.2350S ribosomal protein L2 OS=Aggregatibacter actino... [more]
RK2_PINKO3.812e-2333.8150S ribosomal protein L2, chloroplastic OS=Pinus k... [more]
RK2_PICAB3.812e-2333.6350S ribosomal protein L2, chloroplastic OS=Picea a... [more]
RK2_PELHO4.978e-2335.5750S ribosomal protein L2, chloroplastic OS=Pelargo... [more]
RK2_CYCTA4.978e-2332.7350S ribosomal protein L2, chloroplastic OS=Cycas t... [more]
RL2_YEREN6.502e-2333.8550S ribosomal protein L2 OS=Yersinia enterocolitic... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTCAGTCTCTTTCGCCCTCTAAAGAAATGGGTCGTGTG
ATTCGCGCACAGCGTAAGGGTGCAGGTTCGGTCTTCAAGTCCCACACCCA
CCACCGTAAGGGTCCGGCCCAGTTCCGCAGCCTCGACTTCGGTGAGCGTA
ATGGTTACCTCAAGGGTGTCGTCGCAGAGATTATTCACGATCCGGGTCGT
GGTGCCCCGCTGGCCCGAGTTACCTTTCGTCACCCTTTTCGCTACATGAA
ACAAAAGGAGCTTTTCATTGCCGCCGAGGGTATGTACACGGGTCAGTTCG
TGTACTGCGGCAAGAAAGCCACTCTGATGGTTGGTAATGTGTTGCCCGTT
AGATCTATCCCTGAAGGAGCTGTCGTTTGCAACGTTGAGCATCATGTTGG
TGATCGCGGTGTTCTCGCTAGAGCTTCTGGTGATTATGCCGTTATCATCA
GTCATAACCCCGATAATGACACCACCAGGGTCAAGCTTCCATCTGGTGCC
AAAAAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGGTTGCCGG
CGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACA
AATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCAGTGGAGCATCCTCATGGAGGANGTAACCACCAGCACATTGGTCA
TGCTAGCACTGNTANGCGTGATGCTCCCCCTGGCCAGAAGGTTGGTCTTA
TTGCAGCCAGGAAGACTGGTCNGCTCAAANGACAGCTGCTGCCACTGCAN
GCAAGGGCGACAGGCTAAANTCTTTGTGTTACACAATCGTCTTTTATCGC
GATCTGGATTTTACTTTCCTGCTGATCATACCTGGAAAAATTGTTCAGAT
T
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