EY756553

Overview
NameEY756553
Unique NameEY756553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11638 contig Csv1_Contig11638:34..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METTH (50S ribosomal protein L2P OS=Methanobacterium thermoautotrophicum GN=rpl2p PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.090e-57
Identity = 119/245 (48.57%), Postives = 155/245 (63.27%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ + +QR+G G+  ++S +H  KG  ++R+ D  E  G LKG V +I+HDPGR AP+ARV F +      ++ L +A E +   + V CG KA +  GN LP+  IPEG  + N+E+  GD G L R+SG YA +I+H  D D   ++LPSG  K +   CRA +G VAGGGR EKP LKAG  YH  R K      VRGVAMN V+HPHGG N QH G  +T  R APPG+KVG IAAR+TG
Sbjct:    1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVARVKFENG-----EERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENRPGDGGKLVRSSGTYASLITH--DADKAVIELPSGELKALNPQCRATVGVVAGGGRREKPFLKAGKKYHALRAKGKKSVTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAARRTG 238          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METVS (50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.270e-57
Identity = 115/245 (46.94%), Postives = 157/245 (64.08%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ + +Q +G G+  ++S +H RKG  ++RS D  E+ G + G V +++HDPGR AP+A+V F +      ++ L +  EG+  G+ + CG  A +  GNVLP+  IPEG  V N+E   GD G L RA G YA +++H  D   T VKLPSG  K++   CRA IG VAGGGR EKP +KAG  +H    K   WPKVRGVAMN V+HP+GG  HQH+G  S+  R+  PG+KVG IA+R+TG
Sbjct:    1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRTG 238          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METJA (50S ribosomal protein L2P OS=Methanocaldococcus jannaschii GN=rpl2p PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 8.989e-57
Identity = 118/249 (47.39%), Postives = 157/249 (63.05%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXR-DAPPGQKVGLIAARKTGXLK 779
            MG+ + +QR+G GS V+   +H R+G A++R  D  E+ G + G + +I+HDPGR AP+A+V +        ++ L +  EG+  G  + CG  A +  GN+LP+ +IPEG  V N+E   GD G L RA G YA I++H  D + T VKLPSG  K + S CRA IG VAGGGR EKP +KAG  YH  + K   WP+VRGVAMN V+HP GG  HQH G  +T  R   PPG+KVG I+AR+TG  K
Sbjct:    1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVAKVEYE-----TGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKYHAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKVGHISARRTGVRK 242          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METVA (50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.615e-56
Identity = 114/244 (46.72%), Postives = 156/244 (63.93%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKT 767
            MG+ + +Q +G G+  ++S +H RKG  ++RS D  E+ G + G V +++HDPGR AP+A+V F +      ++ L +  EG+  G+ + CG  A +  GNVLP+  IPEG  V N+E   GD G L RA G YA +++H  D   T VKLPSG  K++   CRA IG VAGGGR EKP +KAG  +H    K   WPKVRGVAMN V+HP+GG  HQH+G  S+  R+  PG+KVG IA+R+T
Sbjct:    1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRT 237          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_AERPE (50S ribosomal protein L2P OS=Aeropyrum pernix GN=rpl2p PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.461e-56
Identity = 122/248 (49.19%), Postives = 151/248 (60.89%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ +R QR G G+  ++S  H   GPA++  L        L+G V E+IHDPGR  PLARV       +     L  AAEGMY GQ +  G  A    GN+LP+  IPEG  V NVE   GD G LAR +G YA+++        T ++LPSG  K +P+  RA IG  AG GR EKP++KAG AYHK++VK   WP+VRGVAMN V+HP GG  HQH G  ST  R APPG+KVG IAAR+TG  K
Sbjct:    1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIAARRTGRRK 237          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.827e-56
Identity = 121/248 (48.79%), Postives = 154/248 (62.10%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ +  QR+G GS  FKS +H  +G  ++  L++ +    L+GVV EI+HDPGR AP+ARV F +       ++L IA EG+  GQ +Y G  A + VGN LP+  IPEG  V N+E   GD G   RA G YA+++S  PD     V+LPSG  K     CRA IG VAGGGR EKPL+KAG AY+K++ +   WP  RGV MN V HP GG  H H G  +T  R APPG+KVG IAAR+TG  K
Sbjct:    1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEKT-LRGVVEEIMHDPGRTAPVARVKFENGI-----EKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREPDK--VIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.610e-56
Identity = 123/248 (49.60%), Postives = 151/248 (60.89%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ I  QR+G  S VFK+  H    PA++  LD  +     K VV +++HDPGR  PLA+V       +        A EGMY GQ +  G  A  + GN+LPV  IPEG  V N+E   GD G   RASG YAVI+        T+V+LPSG    +P+  RAMIG +AGGGR EKPLLKAG AY+K+  K   WPKVRGVAMN   HPHGG +HQH+G  ST  R+ PPG+KVG IAAR+TG  K
Sbjct:    1 MGKRIIPQRRGKASPVFKTPDHIHVAPARYPLLDPSKT---YKAVVEDLVHDPGRWVPLAQVKLETGLVFYVP-----AVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKRPGDGGKFVRASGTYAVIVGRA--GGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKPLLKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKVGHIAARRTGRRK 238          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.695e-55
Identity = 115/248 (46.37%), Postives = 155/248 (62.50%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ I  QR+G G + F+S  H +  PA++        +  ++GV+ EI+H+PGR  P++ V   +      Q+  +I  EG+Y GQ +  GK A +  GNVLP+  IP+G++VCNVE   GD G +AR SG YA++ SH  + D   ++LPS  +K++ + CRA IG VAG GR EKP +KAG  Y+  R     WP VRGVAMNPV HPHGG +H+  G  +T  R APPGQKVG IAARKTG  K
Sbjct:    1 MGKRILVQRRGRGGIQFRSKDHLKIAPARYPQ---DGMDNLMRGVIKEILHEPGRHTPISLVELENG-----QEFYYIPPEGVYEGQEIQIGKGAEVKTGNVLPLSEIPDGSLVCNVEIRPGDGGKIARRSGTYAIVFSH--EGDKVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPFMKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHIAARKTGRAK 238          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_THEGJ (50S ribosomal protein L2P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.932e-55
Identity = 118/248 (47.58%), Postives = 154/248 (62.10%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ +  QR+G G+  F++ +H  +G  ++  L+  +    L+GVV EI+HDPGR AP+ARV F         K+L +A EG+  GQ +Y G +A + +GN LP+  IPEG  V N+E   GD G   RA G YA+++S   + D   V+LPSG  K     CRA IG VAGGGR EKP++KAG AY+  + +   WPK RGV MN V HPHGG  H HIG  ST  R APPG+KVG IAAR+TG  K
Sbjct:    1 MGKSLIQQRRGKGTTTFRAPSHRYRGAVKYVPLNIVKEKT-LRGVVEEILHDPGRTAPVARVKFEDG-----TKKLILAPEGVLVGQEIYIGPEAPIAIGNTLPLAKIPEGTYVYNIEGVPGDGGKYVRAGGTYALVVSR--ERDKVIVQLPSGELKQFKPECRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHIAARRTGRRK 239          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_PYRAB (50S ribosomal protein L2P OS=Pyrococcus abyssi GN=rpl2p PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.932e-55
Identity = 118/248 (47.58%), Postives = 155/248 (62.50%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ +  QR+G GS  F+S +H  +G  ++  L++ + +  L+GVV EI+HDPGR AP+ARV F +       ++L IA EG+  GQ +Y G  A + +GN LP+  IPEG  V N+E   GD G   RA G YA+++S   + D   V+LPSG  K     CRA IG VAGGGR EKPL+KAG AY+K++ +   WP  RGV MN V HP GG  H H G  +T  R APPG+KVG IAAR+TG  K
Sbjct:    1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239          
The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_METTH3.090e-5748.5750S ribosomal protein L2P OS=Methanobacterium ther... [more]
RL2_METVS5.270e-5746.9450S ribosomal protein L2P OS=Methanococcus vanniel... [more]
RL2_METJA8.989e-5747.3950S ribosomal protein L2P OS=Methanocaldococcus ja... [more]
RL2_METVA2.615e-5646.7250S ribosomal protein L2P OS=Methanococcus vanniel... [more]
RL2_AERPE4.461e-5649.1950S ribosomal protein L2P OS=Aeropyrum pernix GN=r... [more]
RL2_PYRFU5.827e-5648.7950S ribosomal protein L2P OS=Pyrococcus furiosus G... [more]
RL2_DESK17.610e-5649.6050S ribosomal protein L2P OS=Desulfurococcus kamch... [more]
RL2_KORCO1.695e-5546.3750S ribosomal protein L2P OS=Korarchaeum cryptofil... [more]
RL2_THEGJ4.932e-5547.5850S ribosomal protein L2P OS=Thermococcus gammatol... [more]
RL2_PYRAB4.932e-5547.5850S ribosomal protein L2P OS=Pyrococcus abyssi GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTCAGTCTCTTTCGCCCTCTAAAGAAATGGGTCGTGTG
ATTCGCGCACAGCGTAAGGGTGCAGGTTCGGTCTTCAAGTCCCACACCCA
CCACCGTAAGGGTCCGGCCCAGTTCCGCAGCCTCGACTTCGGTGAGCGTA
ATGGTTACCTCAAGGGTGTCGTCGCAGAGATTATTCACGATCCGGGTCGT
GGTGCCCCGCTGGCCCGAGTTACCTTTCGTCACCCTTTTCGCTACATGAA
ACAAAAGGAGCTTTTCATTGCCGCCGAGGGTATGTACACGGGTCAGTTCG
TGTACTGCGGCAAGAAAGCCACTCTGATGGTTGGTAATGTGTTGCCCGTT
AGATCTATCCCTGAAGGAGCTGTCGTTTGCAACGTTGAGCATCATGTTGG
TGATCGCGGTGTTCTCGCTAGAGCTTCTGGTGATTATGCCGTTATCATCA
GTCATAACCCCGATAATGACACCACCAGGGTCAAGCTTCCATCTGGTGCC
AAAAAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGGTTGCCGG
CGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACA
AATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCAGTGGAGCATCCTCATGGAGGANGTAACCACCAGCACATTGGTCA
TGCTAGCACTGNTANGCGTGATGCTCCCCCTGGCCAGAAGGTTGGTCTTA
TTGCAGCCAGGAAGACTGGTCNGCTCAAANGACAGCTGCTGCCACTGCAN
GCAAGGGCGACAGGCTAAANTCTTTGTGTTACACAATCGTCTTTTATCGC
GATCTGGATTTTACTTTCCTGCTGATCATACCTGGAAAAATTGTTCAGAT
T
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