EY756553

Overview
NameEY756553
Unique NameEY756553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11638 contig Csv1_Contig11638:34..933. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.627e-48
Identity = 102/246 (41.46%), Postives = 149/246 (60.57%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ + +Q +G G+  +++ +H  K   +   +D    N  L+G V  I HDP R AP+A+V F +       +ELF+ A+EG+  G  + CG  A +  GN++P+ ++PEG  +CNVE    D G   R+SG YA +++H      T V +PSG  K +   CRA++G VAG GR ++P LKAG  YHK + +   +P+V  VAMNP +HP GG   +H G  +T  R+APPG+KVGLIAAR+TG
Sbjct:    1 MGKRLISQNRGRGTPTYRAPSHKYKADLRHPRVD---ENSSLRGEVVGIEHDPARSAPIAKVAFENG------EELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTHEATR--TAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIAARRTG 235          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SULTO (50S ribosomal protein L2P OS=Sulfolobus tokodaii GN=rpl2p PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.301e-47
Identity = 105/245 (42.86%), Postives = 145/245 (59.18%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ +  QR G G + F+S +  R G A+  +++     G   G V +I+H+PG  APLA +      ++        + +G+  GQ +  GK A +  GN++ V ++PEG ++ N+E   GD G  AR++G Y V++      D   VKL S     + S  RA++G VAGGG TEKPLLKAGN Y K++VK   WP VRGVAMN V HPHGG  HQ +   ST  R+APPG+KVG IAAR+TG
Sbjct:    1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKT--GDKVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTG 233          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_SULSO (50S ribosomal protein L2P OS=Sulfolobus solfataricus GN=rpl2p PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.301e-47
Identity = 105/245 (42.86%), Postives = 148/245 (60.41%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ +  QR G GS  F++    R G  ++ ++      G+  G V +I+H+PG  AP+A V   +  +++ Q     A +G+   Q +  GK + +  GNV+ +   PEG +VCNVE + GD G  AR++G YAV++  +   D   ++LPS   K + +  RA +G VAGGG  EKPLLKAG  Y K++VK   WP VRGVAMN V+HPHGG  HQ +   ST  R+APPG+KVG IAAR+TG
Sbjct:    1 MGKNLLQQRAGKGSPTFRNPGWLRIGKVRYPNIF-----GHFIGKVIDIVHNPGMNAPVALVKLENGTKFLMQ-----AIQGLVVNQKIEFGKGSPIANGNVIEIGDAPEGTIVCNVEENFGDGGKYARSAGSYAVVVGKS--GDRVLIRLPSDKIKAVSNKARATVGIVAGGGVIEKPLLKAGANYWKYKVKAKKWPIVRGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTG 233          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_PYRIL (50S ribosomal protein L2P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.219e-47
Identity = 105/245 (42.86%), Postives = 142/245 (57.96%), Query Frame = 3
Query:   39 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ I  QR+G  GS F+S +  R GP ++  L+     GY    V EI+H+PG  AP+AR+   +   ++       AAEG+Y GQ +  G  A    GN++ +  +PEG +V NVE   GD G  ARA G YAV++   P+ + T ++LPSG    + S  RA +G VAGGGR EKP LKAG  YH+ + K   +P VRG AM+P  HPHGG +H   G  +   + APPGQKVG   +R TG
Sbjct:    1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLNVTVGRGY----VVEILHEPGLNAPVARIRLENGVEFLN-----FAAEGLYVGQEIEVGDLAAPKTGNIVILGRVPEGTMVFNVEKRAGDGGKFARAGGTYAVVVGQKPEENKTIIRLPSGKVVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRAKAKAWKYPTVRGKAMSPYAHPHGGGSHPKGG--TPVPKTAPPGQKVGFYGSRCTG 234          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_THENV (50S ribosomal protein L2P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.457e-47
Identity = 105/245 (42.86%), Postives = 145/245 (59.18%), Query Frame = 3
Query:   39 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ I  QR+G  GS F+S +  R+GP ++  L    R     G V +IIH PG  AP+A++   +   ++       AAEG+Y GQ +  G+ A+   GNV+ +   PEG +V NVE   GD G  AR+ G YAV++   P+ + T V+LPSG    + +  RA +G VAGGGR EKP++KAG  Y++ R K   +P VRG AM+P  HPHGG +HQ  G  +   + APPGQKVG I +R TG
Sbjct:    1 MGKRILVQRRGRGGSQFRSPSWRREGPVRYPPLGTAGR-----GYVVDIIHVPGLNAPVAKIRLENGLEFLNY-----AAEGLYVGQEIEIGEAASPKTGNVVVLGKAPEGTMVFNVEKRPGDGGKFARSGGTYAVVVGQKPEENKTIVRLPSGRTMEVDARGRATVGLVAGGGRIEKPMVKAGKKYYRARAKAWKYPLVRGKAMSPYAHPHGGGSHQKGG--TPVSKTAPPGQKVGFIGSRCTG 233          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.101e-46
Identity = 109/249 (43.78%), Postives = 152/249 (61.04%), Query Frame = 3
Query:   39 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGE-RNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG+ +  QR+G  GSVF++    R GPA++   +  E +N  L GVV +++H+PGRGAPLA V F         K   I  EG+  GQ +Y G KA  ++G+++ + ++PEG +V N+E   GD G LAR+SG YA++++H+  N  T ++LPS   K + S  RA IG VA GGR EKP+LKAG  +H  R K   +P VRG AM+   HP GG +H      +   R+APPG+KVG IA R+TG  K
Sbjct:    1 MGKRLLVQRRGRGGSVFRNPGWKRLGPARYPPYNPEEFKNKVLVGVVKDLLHEPGRGAPLALVEFEDG-----TKMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHPAGGGHHPK--GLTPAPRNAPPGRKVGHIAPRRTGRKK 240          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METBU (50S ribosomal protein L2P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.101e-46
Identity = 102/245 (41.63%), Postives = 142/245 (57.96%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            M + I +Q +G GS  +++ +H  K   +   +D       L G V  I HDP R AP+A V F +      +K+  +  EG+  G+ + CG  A +  GN LP+  IPEG  +CN+E    D G  AR+SG YA ++S   +     V++PSG  K     CRA IG VAGGGR ++P LKAG  YHK + +   +P+V G+AMN V+HP GG N +H G  +T  R+APPG+KVG IAAR+TG
Sbjct:    1 MAKRIISQNRGRGSPTYRAPSHKYKAELKHPRVD---EESTLNGTVIGIEHDPARSAPIAMVAFENG-----KKQFIVVPEGISVGEKLSCGVSAEVKPGNTLPLAEIPEGIPICNIESKPNDGGQYARSSGVYATLVSR--ELSKVVVRMPSGVLKWFHPKCRATIGIVAGGGRVDRPFLKAGKKYHKMKARAAKYPRVSGIAMNVVDHPFGGGNRKHPGKPTTVSRNAPPGRKVGHIAARRTG 235          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.454e-46
Identity = 104/246 (42.28%), Postives = 145/246 (58.94%), Query Frame = 3
Query:   39 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTG 770
            MG+ I  QR G  GS F+S +  R  P ++      +    ++G++ E++H  G  AP   V   +       +E+++ A EG+Y G+ +  G  A +  GNV+P+  IPEG +VCN+E  VGD G  AR+SG Y V++ H   + TT V+LPSG    + S  RA IG VAGGGR EKP +KAGN YH+ R K   +PKVRG AM+   HPHGG +HQ  G  +   ++APPGQKVG   ++ TG
Sbjct:    1 MGKKILVQRAGRGGSQFRSPSWRRIAPLRYVQFSEEQLKTTIRGIIKELVHVTGLNAPAMHVVLENG------EEMYLPAVEGVYVGKIIEFGPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHPHGGGSHQQGG--TPVKKNAPPGQKVGFYGSKCTG 236          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL2_METPE (50S ribosomal protein L2P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.324e-46
Identity = 103/248 (41.53%), Postives = 138/248 (55.65%), Query Frame = 3
Query:   39 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHASTXXRDAPPGQKVGLIAARKTGXLK 779
            MG  I+ Q +G G   +++ +H  K  A+ + L  G     ++GV+ +I HDP R  P+A V      +    K   +  EG+  G  V  G +A +  GN LP+  IP G+ +CN+E   GD G   RASG  A+II    D     VK+PSG  K   S C A +G VAGGGR EKP +KAG  +HK + +   WP+VRGVAMN ++HP GG  HQH G   T  R   PG+KVG +AAR+TG  K
Sbjct:    1 MGHRIKTQNRGRGGPTYRAPSHQYK--AELKHL--GNDKVTVRGVIIDIEHDPARHTPIALVRLEGEGK----KVYLLVTEGLGVGDQVAWGPEAEVKNGNTLPISKIPTGSYICNIEARPGDGGKFVRASGVQAIIIDKTVDR--VGVKMPSGKMKWFSSRCLATVGVVAGGGRGEKPFVKAGKKFHKVKSQATYWPRVRGVAMNVIDHPFGGGGHQHTGRPKTVSRGTSPGRKVGSVAARRTGRRK 238          
BLAST of EY756553 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.218e-45
Identity = 89/205 (43.41%), Postives = 136/205 (66.34%), Query Frame = 3
Query:  162 KGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGXNHQHIGHAST-XXRDAPPGQKVGLIAARKTG 770
            +G V +I+H+  RGAP+A ++F       K+ +  + A+EGMYTGQ +  G  A + +GN+  ++++PEG  V +VE   GD G  A  +G Y+++++H  + + T +K+PSG K  + S CR ++G VAGGG  +KPLLKA  A++K + + + +P+VRGVAMNPVEH HGG NHQH+G  +T   +D    QK+GL+ AR+TG
Sbjct:   34 EGEVIDIVHERSRGAPVAIISF-------KEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLVGARRTG 231          
The following BLAST results are available for this feature:
BLAST of EY756553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_METAC7.627e-4841.4650S ribosomal protein L2P OS=Methanosarcina acetiv... [more]
RL2_SULTO1.301e-4742.8650S ribosomal protein L2P OS=Sulfolobus tokodaii G... [more]
RL2_SULSO1.301e-4742.8650S ribosomal protein L2P OS=Sulfolobus solfataric... [more]
RL2_PYRIL2.219e-4742.8650S ribosomal protein L2P OS=Pyrobaculum islandicu... [more]
RL2_THENV6.457e-4742.8650S ribosomal protein L2P OS=Thermoproteus neutrop... [more]
RL2_THEPD1.101e-4643.7850S ribosomal protein L2P OS=Thermofilum pendens (... [more]
RL2_METBU1.101e-4641.6350S ribosomal protein L2P OS=Methanococcoides burt... [more]
RL2_CALMQ2.454e-4642.2850S ribosomal protein L2P OS=Caldivirga maquilinge... [more]
RL2_METPE9.324e-4641.5350S ribosomal protein L2P OS=Methanosphaerula palu... [more]
RL8_ENCCU1.218e-4543.4160S ribosomal protein L8 OS=Encephalitozoon cunicu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-H09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756553 ID=EY756553; Name=EY756553; organism=Citrus sinensis; type=EST; length=901bp
CCACGCGTCCGGCTCAGTCTCTTTCGCCCTCTAAAGAAATGGGTCGTGTG
ATTCGCGCACAGCGTAAGGGTGCAGGTTCGGTCTTCAAGTCCCACACCCA
CCACCGTAAGGGTCCGGCCCAGTTCCGCAGCCTCGACTTCGGTGAGCGTA
ATGGTTACCTCAAGGGTGTCGTCGCAGAGATTATTCACGATCCGGGTCGT
GGTGCCCCGCTGGCCCGAGTTACCTTTCGTCACCCTTTTCGCTACATGAA
ACAAAAGGAGCTTTTCATTGCCGCCGAGGGTATGTACACGGGTCAGTTCG
TGTACTGCGGCAAGAAAGCCACTCTGATGGTTGGTAATGTGTTGCCCGTT
AGATCTATCCCTGAAGGAGCTGTCGTTTGCAACGTTGAGCATCATGTTGG
TGATCGCGGTGTTCTCGCTAGAGCTTCTGGTGATTATGCCGTTATCATCA
GTCATAACCCCGATAATGACACCACCAGGGTCAAGCTTCCATCTGGTGCC
AAAAAGATTATTCCAAGTGGCTGCAGAGCTATGATTGGGCAGGTTGCCGG
CGGAGGGAGGACTGAGAAGCCCCTTCTCAAAGCTGGTAATGCATACCACA
AATTCAGAGTGAAGCGAAACTGCTGGCCTAAGGTGCGTGGTGTGGCCATG
AACCCAGTGGAGCATCCTCATGGAGGANGTAACCACCAGCACATTGGTCA
TGCTAGCACTGNTANGCGTGATGCTCCCCCTGGCCAGAAGGTTGGTCTTA
TTGCAGCCAGGAAGACTGGTCNGCTCAAANGACAGCTGCTGCCACTGCAN
GCAAGGGCGACAGGCTAAANTCTTTGTGTTACACAATCGTCTTTTATCGC
GATCTGGATTTTACTTTCCTGCTGATCATACCTGGAAAAATTGTTCAGAT
T
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