EY756536

Overview
NameEY756536
Unique NameEY756536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:689..1578. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP3_RAT (Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus GN=Abcc3 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.150e-54
Identity = 103/215 (47.91%), Postives = 145/215 (67.44%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            R+  VRYR    LVLK +TL + GGEK+G+VGRTG+GKS++    FR++E +                   RS+  IIPQ+P+LF GT+R N+DP G+YSDE+IW++LE   L   V+++P  LD   ++ GDN SVGQRQL+CL R +L+ SR+L +DEATA++D +TD  IQ  IR +F  CT+++IAHR+ T+MD +RV+V+D G   EF S
Sbjct: 1287 RNYSVRYRPGLELVLKNLTLHVQGGEKVGIVGRTGAGKSSMTLCLFRILEAAEGEIFIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSDEDIWRTLELSHLSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDS 1501          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP1_HUMAN (Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.195e-53
Identity = 105/215 (48.84%), Postives = 146/215 (67.91%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            R+  +RYR +   VL+ I ++I+GGEK+G+VGRTG+GKS+L    FR+ E +                   R +  IIPQ+PVLF G++R N+DP  QYSDEE+W SLE   LKD V+A PDKLD   A+ G+N SVGQRQL+CL R +L+ +++L +DEATA+VD +TD  IQ  IR +F  CT+++IAHR+ T+MD  RVIV+D G  +E+G+
Sbjct: 1296 RNYCLRYREDLDFVLRHINVTINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKDFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGA 1510          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP1_BOVIN (Multidrug resistance-associated protein 1 OS=Bos taurus GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.195e-53
Identity = 107/215 (49.77%), Postives = 145/215 (67.44%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            RD  +RYR +  LVLK I ++I GGEK+G+VGRTG+GKS+L    FR+ E +                   R +  IIPQ+PVLF G++R N+DP  QYSDEE+W SLE   LK  V+A PDKL+   A+ G+N SVGQRQL+CL R +L+ +++L +DEATA+VD +TD  IQ  IR +F  CT+++IAHR+ T+MD  RVIV+D G  +E+GS
Sbjct: 1295 RDYGLRYREDLDLVLKHINVTIDGGEKVGIVGRTGAGKSSLTLGLFRIKESAEGEIIIDDINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEWGS 1509          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.561e-53
Identity = 105/212 (49.53%), Postives = 140/212 (66.04%), Query Frame = 1
Query:   13 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            +L +RYR     VLKGI+  I   EKIG+VGRTG+GKS+++   FRL+E S                   R    IIPQ+PVLF GT+R NIDP  + +D+++W  L+  QL DV  +    LDS V ++GDNWSVGQRQLLCL R +L+  ++L +DEATASVD  +D+ IQ  IRE+F+ CTI++IAHR+ T+MD DR+IV+DAG   EF
Sbjct: 1066 NLVMRYREGLDPVLKGISCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGAILIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENIDPFNEKTDDQLWSVLKDIQLHDVAKSLEGGLDSKVTENGDNWSVGQRQLLCLARALLRDPKILVLDEATASVDGHSDSLIQATIREKFSNCTILTIAHRLNTIMDSDRIIVLDAGKISEF 1277          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.561e-53
Identity = 102/217 (47.00%), Postives = 146/217 (67.28%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            +  D+ +RYR   P VL G++  I   +K+G+VGRTG+GKS+L+   FR+VE                     R   GIIPQ PVLF GTVR N+DP  +++D ++W+SLER  LKD +   P  LD+ V ++G+N+SVGQRQLL L R +L+ S++L +DEATA+VD +TD  IQ+ IREEF +CT++ IAHR+ T++DCD+V+V+D+G  +EF S
Sbjct: 1238 KFEDVVLRYRPELPPVLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRLNTIIDCDKVLVLDSGKVQEFSS 1454          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.561e-53
Identity = 100/214 (46.73%), Postives = 146/214 (68.22%), Query Frame = 1
Query:   13 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            D+ +RYR   P VL G++  ++  EK+GVVGRTG+GKS+++   +R+VE                     R    IIPQ PVLF GTVR NIDP  +++D ++W++LER  +KDV+   P  LD+ V++ G+N+SVGQRQLL L R +L+ S++LF+DEATASVD +TD+ IQR IREEF +CT++ IAHR+ T++DCD+++V+ +G   E+ S
Sbjct: 1239 DVHLRYRPGLPPVLHGLSFFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILFLDEATASVDVRTDSLIQRTIREEFKSCTMLIIAHRLNTIIDCDKILVLSSGQVLEYDS 1452          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.038e-53
Identity = 102/215 (47.44%), Postives = 145/215 (67.44%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            R+  VRYR    LVLK +T+ + GGEK+G+VGRTG+GKS++    FR++E +                   RS+  IIPQ+P+LF GT+R N+DP G+YS+E+IW++LE   L   V+++P  LD   A+ GDN SVGQRQL+CL R +L+ SR+L +DEATA++D +TD  IQ  IR +F  CT+++IAHR+ T+MD +RV+V+D G   EF S
Sbjct: 1288 RNYSVRYRPGLELVLKNVTVHVQGGEKVGIVGRTGAGKSSMTLCLFRILEAAEGEIVIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSEEDIWRALELSHLNTFVSSQPAGLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDS 1502          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCCB_HUMAN (ATP-binding cassette transporter sub-family C member 11 OS=Homo sapiens GN=ABCC11 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.931e-53
Identity = 102/221 (46.15%), Postives = 145/221 (65.61%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHPGCLR 672
            +D  ++YR NTP VL GI L+I G E +G+VGRTGSGKS+L    FRLVEP                    RS+  +IPQ+PVL  GT+R N+DP  +++D++IW +LER  L   ++  P KL + V ++G N+SVG+RQLLC+ R +L++S+++ +DEATAS+D +TD  IQR IRE F  CT++ IAHR+ TV++CD ++V+  G   EF   P  LR
Sbjct: 1144 QDYHMKYRDNTPTVLHGINLTIRGHEVVGIVGRTGSGKSSLGMALFRLVEPMAGRILIDGVDICSIGLEDLRSKLSVIPQDPVLLSGTIRFNLDPFDRHTDQQIWDALERTFLTKAISKFPKKLHTDVVENGGNFSVGERQLLCIARAVLRNSKIILIDEATASIDMETDTLIQRTIREAFQGCTVLVIAHRVTTVLNCDHILVMGNGKVVEF-DRPEVLR 1363          

HSP 2 Score: 68.1662 bits (165), Expect = 7.334e-11
Identity = 50/206 (24.27%), Postives = 90/206 (43.69%), Query Frame = 1
Query:   52 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFR---LVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSH 657
            L  I L +  G  +GV G TGSGKS+L+        L+E S                   +     +PQ+  +  G +R NI   G Y      + L  C L   +   P    + + + G N S GQ+Q + L R +    ++  +D+  ++VD+     I +  I++     T++ + H++  +  C ++I+++ G   E G+H
Sbjct:  527 LHKINLVVSKGMMLGVCGNTGSGKSSLLSAILEEMHLLEGSVGV----------------QGSLAYVPQQAWIVSGNIRENILMGGAYDKARYLQVLHCCSLNRDLELLPFGDMTEIGERGLNLSGGQKQRISLARAVYSDRQIYLLDDPLSAVDAHVGKHIFEECIKKTLRGKTVVLVTHQLQYLEFCGQIILLENGKICENGTH 716          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.746e-53
Identity = 105/215 (48.84%), Postives = 144/215 (66.98%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            RD  +RYR +  LVLK I ++I GGEK+G+VGRTG+GKS+L    FR+ E +                   R +  IIPQ+PVLF G++R N+DP  QYSDEE+W +LE   LK  V+A PDKL+   A+ G+N SVGQRQL+CL R +L+ +++L +DEATA+VD +TD  IQ  IR +F  CT+++IAHR+ T+MD  RVIV+D G  +E G+
Sbjct: 1293 RDYCLRYREDLDLVLKHINVTIEGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGVNIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGA 1507          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP1_MACFA (Multidrug resistance-associated protein 1 OS=Macaca fascicularis GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.746e-53
Identity = 104/215 (48.37%), Postives = 145/215 (67.44%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            R+  +RYR +   VL+ I ++I+GGEK+G+VGRTG+GKS+L    FR+ E +                   R +  IIPQ+PVLF G++R N+DP  QYSDEE+W SLE   LK  V+A PDKLD   A+ G+N SVGQRQL+CL R +L+ +++L +DEATA+VD +TD  IQ  IR +F  CT+++IAHR+ T+MD  RVIV+D G  +E+G+
Sbjct: 1296 RNYCLRYREDLDFVLRHINVTINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIARIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKGFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGA 1510          
The following BLAST results are available for this feature:
BLAST of EY756536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRP3_RAT9.150e-5447.91Canalicular multispecific organic anion transporte... [more]
MRP1_HUMAN1.195e-5348.84Multidrug resistance-associated protein 1 OS=Homo ... [more]
MRP1_BOVIN1.195e-5349.77Multidrug resistance-associated protein 1 OS=Bos t... [more]
ABCC3_DICDI1.561e-5349.53ABC transporter C family member 3 OS=Dictyostelium... [more]
AB1C_ARATH1.561e-5347.00ABC transporter C family member 1 OS=Arabidopsis t... [more]
AB11C_ARATH1.561e-5346.73ABC transporter C family member 11 OS=Arabidopsis ... [more]
MRP3_MOUSE2.038e-5347.44Canalicular multispecific organic anion transporte... [more]
ABCCB_HUMAN5.931e-5346.15ATP-binding cassette transporter sub-family C memb... [more]
MRP1_MOUSE7.746e-5348.84Multidrug resistance-associated protein 1 OS=Mus m... [more]
MRP1_MACFA7.746e-5348.37Multidrug resistance-associated protein 1 OS=Macac... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-G04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756536 ID=EY756536; Name=EY756536; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGG
CTGGTGGAGCCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTC
ATTGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAG
AACCTGTCCTTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGT
CAGTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAA
AGATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATA
GTGGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGG
GTTATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTC
TGTTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGT
TTGCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATG
GATTGTGATAGAGTTATAGTTGTTGATGCAGGATGGGCGAAAGAATTTGG
CAGCCATCCAGGTTGCTTGAGAGCCATCACTCTTTGGAGCATTGGTGCAG
GAGTATGCCAACCGATCGGCAGAACTGTAGGAACAATCCTTTGCACTTGA
TGNTGGGTGAAAAGAGTTTTCTGTGATGGAATGCCTATGAGTTTAGGACC
ACCTGTGACTGGCATGAAAGATCACATTCCTCGCTCAAAGGTGCAGCAAA
GAACTTCTTCTGATATGCATGGAATTTAGTAATACTCT
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