EY756536

Overview
NameEY756536
Unique NameEY756536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:689..1578. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MACB_BORA1 (Macrolide export ATP-binding/permease protein macB OS=Bordetella avium (strain 197N) GN=macB PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 56/208 (26.92%), Postives = 93/208 (44.71%), Query Frame = 1
Query:   49 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS----XXXXXXXXXXXXXXXXXXXRSRFGIIPQE-PVLFEGTVRSNIDPIGQYS-------DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE-EFAACTIISIAHRIPTVMDCDRVIVVDAG 633
            VL+ + LSI  GE + +VG +GSGKSTL+ +   L  PS                       R  FG I Q   +L + + ++N++    Y+        E     L R  L + +  +P +L           S GQ+Q + + R ++   R++  DE T ++D+QT  E+ RI++E   A  TI+ + H +       R+I +  G
Sbjct:   24 VLREVNLSIQAGEMVAIVGASGSGKSTLMNILGCLDRPSRGGYRVDGRETARMDPDELAELRREHFGFIFQRYHLLADLSAQANVEMPAVYAGMASGPRHERAAALLRRLGLSERLDYRPGQL-----------SGGQQQRVSIARALMNGGRIILADEPTGALDTQTGQEVLRILKELNAAGHTIVLVTHDMSVARHARRIIEISDG 220          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CBIO_PEDPA (Cobalt import ATP-binding protein cbiO OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=cbiO PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 61/228 (26.75%), Postives = 101/228 (44.30%), Query Frame = 1
Query:    7 VRDLQVRY-RSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEP------VLFEGTVRSNIDPIGQYSDEE---IWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            V++L  +Y  S     L  ++LSI  G    +VG  GSGKSTL +    L+  +                   R + G+I Q P         E  V   ++ +G  +D+    +   L++ +++D    +PD+L           S GQ+Q + +  V+     ++ +DEAT+ +D Q   EI  +I E  +    T+ISI H +   M  D VIV++ G   E G+
Sbjct:    7 VKNLTYKYANSGDKKALDNVSLSIEKGSWTSIVGHNGSGKSTLARSIDGLMSYNEGVINVDGIILSDDTVWDIRKKIGMIFQNPDNQFVGATVEDDVAFGLENLGIETDKMHKIVNNVLKKVRMEDFKERQPDQL-----------SGGQKQRVAIAGVLASKPEIIILDEATSMLDPQGRYEIINLINEIHQENDITVISITHDVSEAMLSDHVIVLNDGKIVESGA 223          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CBIO2_UREPA (Cobalt import ATP-binding protein cbiO 2 OS=Ureaplasma parvum GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 52/212 (24.53%), Postives = 102/212 (48.11%), Query Frame = 1
Query:   46 LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLK-----DVV--AAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII--REEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            ++LK ++ +I+  E + V+G  GSGKST+ +V   L++P                    R+  GI+ Q P         +   +G  ++++I   LE  ++      D++  AA    ++ L+       S GQ+Q + +  V+  + +++  DE+T+ +D +   E++ ++    + A  TIISI H +  V+  D+VIV+  G  +  G+
Sbjct:   41 MILKNVSFTINDNEYVCVIGHNGSGKSTISKVLTGLLKPKSGVIKLFGIEISAANLKYLRNNIGIVFQNP---------DNQFVGITAEDDIAFGLENRKVPPNKMWDIINDAAVATGIEDLLKKESLELSGGQKQRVAIASVLAINPKVIIFDESTSMLDPKGKNELKELMVSLRDVAKKTIISITHDMEEVVKADKVIVMSNGEVQYIGT 243          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CBIO2_LACBA (Cobalt import ATP-binding protein cbiO 2 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 56/218 (25.69%), Postives = 96/218 (44.04%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQL-KDVVAAKPDK------LDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMDCDRVIVVDAG 633
            V  L  +Y  N    L  ++ ++H GE + +VG  GSGKSTL +    L+  +                   R + G+I Q P         +   +G   ++++   LE  Q+ +D +  +         + S       + S GQ+Q + L  ++    ++L +DEAT+ +D Q   E+  I+R+  +    T+ISI H I      DRV+V+D G
Sbjct:    8 VDHLTYQYDENQAPALTDVSFTVHAGEWLAIVGHNGSGKSTLAKSLDGLLPFTQGSVTVGGITLTPETVWQVREQIGMIFQNP---------DNQFVGATVEDDVAFGLENRQISRDEMVPRVQAALAQVGMTSFAQREPSSLSGGQKQRVALAGIVAIAPKILILDEATSMLDPQGRIEMLAIVRQLRQQQNLTVISITHDIDEAASADRVLVIDDG 216          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CBIO1_BACC1 (Cobalt import ATP-binding protein cbiO 1 OS=Bacillus cereus (strain ATCC 10987) GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 56/221 (25.34%), Postives = 99/221 (44.80%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-SXXXXXXXXXXXXXXXXXXXRSRFGIIPQEP-VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            R  ++  +Y       LK ++ S++ GE + V+G+ GSGKSTL ++   L  P +                   R + G++ Q P   F GT   +    G    E I    E+   +   A +  +++  + D   + S GQ+Q + +  V+     +L +DEAT+ +D Q   E+   +R+       T++SI H +      DRVI+++ G   E G+
Sbjct:    7 RTENISFQYPGAATYALKDVSFSLYEGEWVSVIGQNGSGKSTLAKLLNGLFLPEAGTITVNDTMVLSEETVWDVRKQIGMVFQNPDNQFVGTTVQDDVVFGL---ENIGMPREQMVERLDQALRLVRMEDFLNDEPHSLSGGQKQRVAIAGVLALQPSILILDEATSMLDPQGRREVVETVRQLVNEKGITVLSITHDLEEAAQSDRVIILNKGEILEEGT 224          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: METN_XANCP (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. campestris GN=metN PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 62/223 (27.80%), Postives = 97/223 (43.50%), Query Frame = 1
Query:   46 LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRS---RFGIIPQE---------------PVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 651
            + L  + L I  GE  G++G +G+GKSTLI++  RL EP+                   R+   R G+I Q                P+   GT R+ I       D  + + L R  L+      P +L           S GQ+Q + + R +    ++L  DEAT+++D QT A + +++ +       TI+ I H +  +   CDRV V+DAG   E G
Sbjct:   19 VALHPLDLRIGPGEVFGIIGHSGAGKSTLIRLINRLEEPTGGRLLIGDEDVTALNSTGLRALRRRVGMIFQHFNLLSSRTVAGNVAFPLELAGTPRAEI-------DARVAELLARVGLEQHATKYPAQL-----------SGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMEVIRRVCDRVAVLDAGKLVETG 223          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: METN_XANC8 (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metN PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 62/223 (27.80%), Postives = 97/223 (43.50%), Query Frame = 1
Query:   46 LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRS---RFGIIPQE---------------PVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE--EFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 651
            + L  + L I  GE  G++G +G+GKSTLI++  RL EP+                   R+   R G+I Q                P+   GT R+ I       D  + + L R  L+      P +L           S GQ+Q + + R +    ++L  DEAT+++D QT A + +++ +       TI+ I H +  +   CDRV V+DAG   E G
Sbjct:   19 VALHPLDLRIGPGEVFGIIGHSGAGKSTLIRLINRLEEPTGGRLLIGDEDVTALNSTGLRALRRRVGMIFQHFNLLSSRTVAGNVAFPLELAGTPRAEI-------DARVAELLARVGLEQHATKYPAQL-----------SGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMEVIRRVCDRVAVLDAGKLVETG 223          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: METN1_BURXL (Methionine import ATP-binding protein metN 1 OS=Burkholderia xenovorans (strain LB400) GN=metN1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 61/211 (28.91%), Postives = 93/211 (44.08%), Query Frame = 1
Query:   52 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRS---RFGIIPQEPVLFE-----GTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR--EEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 651
            L  + LSI  GE  G++GR+G+GKSTL++    L  PS                   R      G+I Q   L       G V   ++  G   DE     L   +L  + A K D+  + +       S GQ+Q + + R +    ++L  DEAT+++D +T   I  ++R        TI+ I H++  +   CDRV V+DAG   E G
Sbjct:   21 LHNVNLSIPAGEVFGIIGRSGAGKSTLVRTINLLTRPSEGNIVVNGRDLTTLPAAQLREARREIGMIFQHFNLLSSRTVYGNVALPLELAGMKRDEIEANVLPLLELVGLTAQK-DRYPAQI-------SGGQKQRVGIARALASKPKVLLSDEATSALDPETTRSILDLLRRINRELNLTIVLITHQMDVIKQVCDRVAVLDAGRVVEEG 223          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CBIO2_STAES (Cobalt import ATP-binding protein cbiO 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 53/211 (25.12%), Postives = 94/211 (44.55%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEP-VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAG 633
            +D+  +Y+S+    L  ++ SI  G+   +VG  GSGKST+ ++   + EPS                   R   GI+ Q P   F G++       G   + ++    E     + V  + D ++    D   + S GQ+Q + +  V+  +  +L +DEAT  +D    + +  ++ E       TIISI H +   M  D++IV++ G
Sbjct:   11 KDVSFQYQSDAAFTLNRVSFSIPAGQWTSIVGHNGSGKSTIAKLMVGIEEPSEGQILFQNLPVDSQNKREVRKHIGIVFQNPDNQFVGSIVKFDVAFG--LENQLVPYKEMVSKVNQVLTEVDMINK-ADDEPHSLSGGQKQRVAIAGVLALNPDVLILDEATTMLDPHGKSSLLNLVNEVKVNNHVTIISITHDLDEAMHADQIIVLNKG 218          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CBIO2_STAEQ (Cobalt import ATP-binding protein cbiO 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11
Identity = 53/211 (25.12%), Postives = 94/211 (44.55%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEP-VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAG 633
            +D+  +Y+S+    L  ++ SI  G+   +VG  GSGKST+ ++   + EPS                   R   GI+ Q P   F G++       G   + ++    E     + V  + D ++    D   + S GQ+Q + +  V+  +  +L +DEAT  +D    + +  ++ E       TIISI H +   M  D++IV++ G
Sbjct:   11 KDVSFQYQSDAAFTLNRVSFSIPAGQWTSIVGHNGSGKSTIAKLMVGIEEPSEGQILFQNLPVDSQNKREVRKHIGIVFQNPDNQFVGSIVKFDVAFG--LENQLVPYKEMVSKVNQVLTEVDMINK-ADDEPHSLSGGQKQRVAIAGVLALNPDVLILDEATTMLDPHGKSSLLNLVNEVKVNNHVTIISITHDLDEAMHADQIIVLNKG 218          
The following BLAST results are available for this feature:
BLAST of EY756536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MACB_BORA14.300e-1126.92Macrolide export ATP-binding/permease protein macB... [more]
CBIO_PEDPA4.300e-1126.75Cobalt import ATP-binding protein cbiO OS=Pediococ... [more]
CBIO2_UREPA4.300e-1124.53Cobalt import ATP-binding protein cbiO 2 OS=Ureapl... [more]
CBIO2_LACBA4.300e-1125.69Cobalt import ATP-binding protein cbiO 2 OS=Lactob... [more]
CBIO1_BACC14.300e-1125.34Cobalt import ATP-binding protein cbiO 1 OS=Bacill... [more]
METN_XANCP5.616e-1127.80Methionine import ATP-binding protein metN OS=Xant... [more]
METN_XANC85.616e-1127.80Methionine import ATP-binding protein metN OS=Xant... [more]
METN1_BURXL5.616e-1128.91Methionine import ATP-binding protein metN 1 OS=Bu... [more]
CBIO2_STAES5.616e-1125.12Cobalt import ATP-binding protein cbiO 2 OS=Staphy... [more]
CBIO2_STAEQ5.616e-1125.12Cobalt import ATP-binding protein cbiO 2 OS=Staphy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-G04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756536 ID=EY756536; Name=EY756536; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGG
CTGGTGGAGCCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTC
ATTGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAG
AACCTGTCCTTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGT
CAGTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAA
AGATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATA
GTGGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGG
GTTATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTC
TGTTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGT
TTGCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATG
GATTGTGATAGAGTTATAGTTGTTGATGCAGGATGGGCGAAAGAATTTGG
CAGCCATCCAGGTTGCTTGAGAGCCATCACTCTTTGGAGCATTGGTGCAG
GAGTATGCCAACCGATCGGCAGAACTGTAGGAACAATCCTTTGCACTTGA
TGNTGGGTGAAAAGAGTTTTCTGTGATGGAATGCCTATGAGTTTAGGACC
ACCTGTGACTGGCATGAAAGATCACATTCCTCGCTCAAAGGTGCAGCAAA
GAACTTCTTCTGATATGCATGGAATTTAGTAATACTCT
back to top