EY756536

Overview
NameEY756536
Unique NameEY756536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:689..1578. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: MRP6_RAT (Multidrug resistance-associated protein 6 OS=Rattus norvegicus GN=Abcc6 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.295e-47
Identity = 95/215 (44.19%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            RD  +R+R   P+ ++G++L IH GEK+G+VGRTG+GKS+L     RL E +                   RSR  IIPQ+PVLF G++R N+D + + +DE IW +LE  QLK  V + P +L    +  GD+ SVGQ+QLLCL R +L+ +++L +DEATASVD  T+ ++Q  +   FA CT++ IAHR+ +VM+C RV+V+D G   E GS
Sbjct: 1267 RDFGLRHRPELPMAVQGVSLKIHAGEKVGIVGRTGAGKSSLTWGLLRLQEATEGGIWIDGVPITDMGLHTLRSRITIIPQDPVLFPGSLRMNLDLLQENTDEGIWAALETVQLKAFVTSLPGQLQYECSGQGDDLSVGQKQLLCLARALLRKTQILILDEATASVDPGTEIQMQAALERWFAQCTVLLIAHRLRSVMNCARVLVMDEGQVAESGS 1481          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: YH85_SCHPO (Uncharacterized ABC transporter ATP-binding protein/permease C359.05 OS=Schizosaccharomyces pombe GN=SPBC359.05 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.415e-46
Identity = 96/208 (46.15%), Postives = 133/208 (63.94%), Query Frame = 1
Query:   25 RYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            +YR +    L  I + I   EKIG+VGRTG+GKSTL    FR++EP+                   RSR  IIPQE  +FEG +R N+DP  + +D++IW+ LE   LK+ ++   D L S VA+ G N+S GQRQL+CL RV+L  +R+L +DEATASV ++TDA +Q+ IR+ F   TI+++AHRI TVMD DR++V+D G   EF
Sbjct: 1234 KYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLRSRLSIIPQESQIFEGNIRENLDPNHRLTDKKIWEVLEIASLKNCISQLEDGLYSRVAEGGANFSSGQRQLICLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRFKDRTILTVAHRINTVMDSDRILVLDHGKVVEF 1441          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC5_DICDI (ABC transporter C family member 5 OS=Dictyostelium discoideum GN=abcC5 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.171e-46
Identity = 97/207 (46.86%), Postives = 131/207 (63.29%), Query Frame = 1
Query:   28 YRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            YR   P VLKGI+  I  GEKIG+ GRTGSGKS+L+   FR+VE S                   RS+  IIPQEPV+F GT+RSN+D + +++D E+W  L+  QL + V       + L     DNWS GQ+QL+ LGR +LK  ++L  DEATASVDS +D  IQRIIRE+F    I++IAHR+ T+++ DR++V+D+G   EF
Sbjct: 1219 YRQGLPAVLKGISFEIKAGEKIGICGRTGSGKSSLLLALFRIVELSSGRIIIDGLDISKIGLKDLRSQLAIIPQEPVMFTGTLRSNLDSLSEHTDSELWDVLKEIQLYEHVKKVSVADEGLDLRVNDNWSQGQKQLIGLGRALLKKPKILVCDEATASVDSLSDELIQRIIREKFKDAIILTIAHRLNTIVESDRIMVLDSGSIVEF 1425          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.198e-45
Identity = 88/213 (41.31%), Postives = 137/213 (64.32%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            RD+++RYR  +   LK ++  I+  + IG+VGRTG+GKST+    FR+VE S                   RS  GI+PQ+P +F GT+R NIDP  +Y+D EIW +LE+ +LK  +++ P KL++++ + GD  S GQ+QLLCL R +LK+S+++ MDEAT+ +D  T   I++ + E F  CT+++IAHR+ T++D  ++ VVD G   E+
Sbjct: 1106 RDVEIRYRPTSEPSLKNLSFKINSNDHIGIVGRTGAGKSTVGISLFRMVECSKGSILIDGIDISKIGLHDLRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTGDLIKQTLLENFNDCTMLTIAHRLDTIIDSTKIAVVDKGELIEY 1318          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.043e-45
Identity = 97/213 (45.54%), Postives = 132/213 (61.97%), Query Frame = 1
Query:   13 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW-SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            ++QV Y SN+   LK IT S+   EKIG+VGRTG+GKST+    FRLVE S                   R   GI+PQEP LF GT+RSNIDP+ QY DE IW  LE  +LK ++   P KL+S + ++G+   S GQ+QLLCL R ++K+ +L+ MDEAT+SVD QT   I+ +I E     TI++IAHR+  ++D D++ V+D     EF
Sbjct: 1107 NVQVNYNSNSVPSLKDITFSVESNEKIGIVGRTGAGKSTIANCLFRLVECSKGSILIDGIDIKTIDLNKLRGSLGIVPQEPWLFSGTIRSNIDPLNQYDDEMIWNYLEMVKLKKLIIEMPLKLNSKIHENGNTTLSYGQKQLLCLCRCLIKNPKLIIMDEATSSVDFQTAETIKSVINENLVNNTILTIAHRLDIIIDSDKIAVIDNSKLIEF 1319          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.485e-45
Identity = 86/213 (40.38%), Postives = 138/213 (64.79%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            +++++RYR N+   L+  ++ I+  E+IG++GR+GSGKST+    FR++E S                   RS  GI+PQ+P +F G++R N+DP  Q++D EIW++L + +LK +V+  P KL+SLV   GD  ++G +QLLCL R +L++S+++  DEAT S+D QT   I++ I E F  CTI++IAH I T++D D++ ++D G   EF
Sbjct: 1196 KNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLV-QGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEF 1407          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC2_DICDI (ABC transporter C family member 2 OS=Dictyostelium discoideum GN=abcC2 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.552e-45
Identity = 88/213 (41.31%), Postives = 138/213 (64.79%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            ++++++YR      LK I+  I+  + IGVVGRTG+GKST+    FR+VE S                   R   GI+PQ+P +F G++R NIDP  +Y+D+EIW +LE+ +LKD +++ P KL+S V ++GD  S GQ+QLLCL R +LK+S+++ MDEAT+ +D  T A +++ I E F  CT+++IAHR+ T++D  ++ V+D G   E+
Sbjct: 1140 KNVEIKYRPTADPSLKNISFKINAKDHIGVVGRTGAGKSTVGISLFRMVECSKGSIFIDGVDISKVGLHELRDALGIVPQDPFIFSGSIRMNIDPFNKYTDDEIWTALEKVKLKDAISSMPLKLESGVQENGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTAALLKQTIDENFNDCTMLTIAHRLDTIIDSTKIAVIDKGELVEY 1352          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 2.259e-44
Identity = 99/232 (42.67%), Postives = 139/232 (59.91%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKD----VVAAKP-------------DKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            ++   +YR N   VL  I + I   EK+G+VGRTG+GKSTL    FR++EP+                   RS   IIPQ+   FEGTV++N+DP  +YS++E+ +++E+  LK     ++ +KP             D LD  + ++G N SVGQRQLLCL R +L  S++L +DEATASVD +TD  IQ  IR EF   TI++IAHRI TV+D D++IV+D G  +EF S
Sbjct: 1305 KNYSTKYRENLDPVLNNINVKIEPCEKVGIVGRTGAGKSTLSLALFRILEPTEGKIIIDGIDISDIGLFDLRSHLAIIPQDAQAFEGTVKTNLDPFNRYSEDELKRAVEQAHLKPHLEKMLHSKPRGDDSNEEDGNVNDILDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVLDQGSVREFDS 1536          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 91/223 (40.81%), Postives = 137/223 (61.43%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHPGCLR 672
            ++ DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD+ V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ ++MD   V+V   G   E  + P  L+
Sbjct: 1309 KIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIMDAGLVLVFSEGILVECDTGPNLLQ 1531          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 91/222 (40.99%), Postives = 137/222 (61.71%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHPGCL 669
            ++ DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD++V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ ++MD   V+V   G   E  + P  L
Sbjct: 1313 KIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIMDAGLVLVFSEGILVECDTVPNLL 1534          
The following BLAST results are available for this feature:
BLAST of EY756536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRP6_RAT8.295e-4744.19Multidrug resistance-associated protein 6 OS=Rattu... [more]
YH85_SCHPO1.415e-4646.15Uncharacterized ABC transporter ATP-binding protei... [more]
ABCC5_DICDI9.171e-4646.86ABC transporter C family member 5 OS=Dictyostelium... [more]
ABCCD_DICDI1.198e-4541.31ABC transporter C family member 13 OS=Dictyosteliu... [more]
ABCC9_DICDI2.043e-4545.54ABC transporter C family member 9 OS=Dictyostelium... [more]
ABCCF_DICDI3.485e-4540.38ABC transporter C family member 15 OS=Dictyosteliu... [more]
ABCC2_DICDI4.552e-4541.31ABC transporter C family member 2 OS=Dictyostelium... [more]
BPT1_YEAST2.259e-4442.67Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
ABCC9_RAT3.853e-4440.81ATP-binding cassette transporter sub-family C memb... [more]
ABCC9_HUMAN3.853e-4440.99ATP-binding cassette transporter sub-family C memb... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-G04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756536 ID=EY756536; Name=EY756536; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGG
CTGGTGGAGCCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTC
ATTGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAG
AACCTGTCCTTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGT
CAGTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAA
AGATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATA
GTGGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGG
GTTATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTC
TGTTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGT
TTGCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATG
GATTGTGATAGAGTTATAGTTGTTGATGCAGGATGGGCGAAAGAATTTGG
CAGCCATCCAGGTTGCTTGAGAGCCATCACTCTTTGGAGCATTGGTGCAG
GAGTATGCCAACCGATCGGCAGAACTGTAGGAACAATCCTTTGCACTTGA
TGNTGGGTGAAAAGAGTTTTCTGTGATGGAATGCCTATGAGTTTAGGACC
ACCTGTGACTGGCATGAAAGATCACATTCCTCGCTCAAAGGTGCAGCAAA
GAACTTCTTCTGATATGCATGGAATTTAGTAATACTCT
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