EY756536

Overview
NameEY756536
Unique NameEY756536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:689..1578. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC1_DICDI (ABC transporter C family member 1 OS=Dictyostelium discoideum GN=abcC1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.572e-44
Identity = 86/213 (40.38%), Postives = 135/213 (63.38%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            R+++++Y  +    LK  TL I+  + IG+VGRTG+GKST+    FR+VE S                   RS  GI+PQ+P +F GT+R NIDP  +Y+D EIW +LE+ +LK  +++ P KL++++ + GD  S GQ+QLLCL R +LK+S+++ MDEAT+ +D  T   I++ I   F  CT+++IAHR+ T++D  ++ V+D G   E+
Sbjct: 1119 RNVEIKYGHSGESSLKNFTLKINQKDHIGIVGRTGAGKSTIGNGLFRMVECSKGSILIDGVDISKIGLHELRSSLGIVPQDPFIFSGTIRLNIDPFNKYTDSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTSDLIKQTINNCFKNCTMLTIAHRLDTIIDSTKIAVIDKGKLIEY 1331          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: YOR1_YEAST (Oligomycin resistance ATP-dependent permease YOR1 OS=Saccharomyces cerevisiae GN=YOR1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.584e-44
Identity = 93/224 (41.52%), Postives = 135/224 (60.27%), Query Frame = 1
Query:   28 YRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERC------QLKDVVAAKPDK-----------LDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            YR   P+VLK + L+I  GEKIG+ GRTG+GKST++   +RL E +                   R +  IIPQ+PVLF GT+R N+DP  + +D+E+W +L R        L +V   KPD+           LD  V + G N+S+G+RQLL L R +++ S++L +DEAT+SVD +TD +IQ  I EEF  CTI+ IAHR+ T+++ DR++V++ G   EF
Sbjct: 1222 YRPGLPIVLKNLNLNIKSGEKIGICGRTGAGKSTIMSALYRLNELTAGKILIDNVDISQLGLFDLRRKLAIIPQDPVLFRGTIRKNLDPFNERTDDELWDALVRGGAIAKDDLPEVKLQKPDENGTHGKMHKFHLDQAVEEEGSNFSLGERQLLALTRALVRQSKILILDEATSSVDYETDGKIQTRIVEEFGDCTILCIAHRLKTIVNYDRILVLEKGEVAEF 1445          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC9_RABIT (ATP-binding cassette transporter sub-family C member 9 OS=Oryctolagus cuniculus GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.121e-43
Identity = 90/222 (40.54%), Postives = 137/222 (61.71%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHPGCL 669
            ++ DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V +    LD++V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ +++D D V+V   G   E  + P  L
Sbjct: 1313 KIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLSGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIVDADLVLVFSEGILVECDTGPNLL 1534          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC9_MOUSE (ATP-binding cassette transporter sub-family C member 9 OS=Mus musculus GN=Abcc9 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.121e-43
Identity = 90/223 (40.36%), Postives = 137/223 (61.43%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHPGCLR 672
            ++ DL VRY +N   VLK +   I  G+K+G+ GRTGSGKS+L   FFR+V+                     RSR  II Q+P+LF G++R N+DP  + +D+ +W++LE  QLK++V + P  LD+ V + G+N+SVGQRQL CL R  ++ S +L MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ +++D   V+V   G   E  + P  L+
Sbjct: 1310 KIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIVDAGLVLVFSEGILVECDTGPNLLQ 1532          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.464e-43
Identity = 86/208 (41.35%), Postives = 132/208 (63.46%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAG 633
            ++++++YR N    LK I+  I   EKIG+VG++GSGKST +   FR++E S                   R+  GI PQEP +F GT+R NIDP G YSD EIW +LE+ +LK+ ++  P K+D+++ +   N S GQ+QLLCL RV+LK  +L+F DE ++S+D  T  ++   ++E     T ++IAHRI T++D DR++V+D+G
Sbjct: 1086 KNVEIKYRPNLKPSLKNISFDIKSNEKIGIVGKSGSGKSTTMLALFRMIECSKGSIHIDGIDISKISLSKLRNSIGICPQEPFIFSGTIRKNIDPFGIYSDSEIWLALEKVKLKETISLLPMKIDTIIHEQA-NLSFGQKQLLCLTRVLLKSPKLVFFDEHSSSIDYFTAHQLNISVKENITNSTTLTIAHRIDTIIDSDRILVIDSG 1292          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: YBT1_YEAST (ATP-dependent bile acid permease OS=Saccharomyces cerevisiae GN=YBT1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.497e-43
Identity = 92/239 (38.49%), Postives = 140/239 (58.58%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQL---------------KDVVAAKPDK------LDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHP 660
            V DL +RY  N P V+K ++ S+    KIG+VGRTG+GKST+I   FR +EP                    R    IIPQ+P LF GT+++N+DP  ++SD +I+++L+R  L                +  +   +       L S +++ G N S GQRQL+CL R +L+  +++ +DEATAS+D  +DA+IQ  IR+EF   TI++IAHR+ +V+D D+++V+DAG  KE+  HP
Sbjct: 1383 VNDLSLRYAPNLPRVIKNVSFSVDAQSKIGIVGRTGAGKSTIITALFRFLEPETGHIKIDNIDISGVDLQRLRRSITIIPQDPTLFSGTIKTNLDPYDEFSDRQIFEALKRVNLISEEQLQQGATRETSNEASSTNSENVNKFLDLSSEISEGGSNLSQGQRQLMCLARSLLRSPKIILLDEATASIDYSSDAKIQETIRKEFQGSTILTIAHRLRSVIDYDKILVMDAGEVKEY-DHP 1620          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC8_HUMAN (ATP-binding cassette transporter sub-family C member 8 OS=Homo sapiens GN=ABCC8 PE=1 SV=5)

HSP 1 Score: 176.022 bits (445), Expect = 2.497e-43
Identity = 91/215 (42.33%), Postives = 132/215 (61.40%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            ++++L VRY S+   VLK +   I  G+KIG+ GRTGSGKS+    FFR+V+                     RSR  II Q+PVLF GT+R N+DP  + SD  +W++LE  QLK VV A P  LD+++ + G+N+S GQRQL CL R  ++ + +  MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ T++  D VIV+  G   EF
Sbjct: 1345 QIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGHIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPERKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVIVLKRGAILEF 1559          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC8_RAT (ATP-binding cassette transporter sub-family C member 8 OS=Rattus norvegicus GN=Abcc8 PE=1 SV=4)

HSP 1 Score: 174.481 bits (441), Expect = 7.267e-43
Identity = 90/215 (41.86%), Postives = 132/215 (61.40%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            ++++L VRY S+   VLK +   I  G+KIG+ GRTGSGKS+    FFR+V+                     RSR  II Q+PVLF GT+R N+DP  + SD  +W++LE  QLK VV A P  LD+++ + G+N+S GQRQL CL R  ++ + +  MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ T++  D V+V+  G   EF
Sbjct: 1346 QIQNLSVRYDSSLKPVLKHVNALISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEF 1560          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 7.267e-43
Identity = 90/215 (41.86%), Postives = 132/215 (61.40%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            ++++L VRY S+   VLK +   I  G+KIG+ GRTGSGKS+    FFR+V+                     RSR  II Q+PVLF GT+R N+DP  + SD  +W++LE  QLK VV A P  LD+++ + G+N+S GQRQL CL R  ++ + +  MDEATAS+D  T+  +Q+++   FA  T+++IAHR+ T++  D V+V+  G   EF
Sbjct: 1346 QIQNLSVRYDSSLKPVLKHVNTLISPGQKIGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFNLDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEF 1560          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: VMR1_YEAST (ABC transporter ATP-binding protein/permease VMR1 OS=Saccharomyces cerevisiae GN=VMR1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.675e-39
Identity = 87/229 (37.99%), Postives = 138/229 (60.26%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQL------KDVVAAKPD---------KLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            + +L +RY  N P V++ ++  +    KIG+VGRTG+GKST+I   FRL+EP                    R    IIPQ+P+LF GT++SN+DP  +Y +++I+K+L +  L      ++V+ ++            L + +A+ G N S G+RQLL + R +L+  +++ +DEAT+S+D  +D  IQ IIR EF   TI++IAHR+ +V+D DR+IV+DAG  KE+
Sbjct: 1325 IENLSLRYAPNLPPVIRNVSFKVDPQSKIGIVGRTGAGKSTIITALFRLLEPITGCIKIDGQDISKIDLVTLRRSITIIPQDPILFAGTIKSNVDPYDEYDEKKIFKALSQVNLISSHEFEEVLNSEERFNSTHNKFLNLHTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSDHLIQGIIRSEFNKSTILTIAHRLRSVIDYDRIIVMDAGEVKEY 1553          
The following BLAST results are available for this feature:
BLAST of EY756536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABCC1_DICDI6.572e-4440.38ABC transporter C family member 1 OS=Dictyostelium... [more]
YOR1_YEAST8.584e-4441.52Oligomycin resistance ATP-dependent permease YOR1 ... [more]
ABCC9_RABIT1.121e-4340.54ATP-binding cassette transporter sub-family C memb... [more]
ABCC9_MOUSE1.121e-4340.36ATP-binding cassette transporter sub-family C memb... [more]
ABCC7_DICDI1.464e-4341.35ABC transporter C family member 7 OS=Dictyostelium... [more]
YBT1_YEAST2.497e-4338.49ATP-dependent bile acid permease OS=Saccharomyces ... [more]
ABCC8_HUMAN2.497e-4342.33ATP-binding cassette transporter sub-family C memb... [more]
ABCC8_RAT7.267e-4341.86ATP-binding cassette transporter sub-family C memb... [more]
ABCC8_CRICR7.267e-4341.86ATP-binding cassette transporter sub-family C memb... [more]
VMR1_YEAST1.675e-3937.99ABC transporter ATP-binding protein/permease VMR1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-G04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756536 ID=EY756536; Name=EY756536; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGG
CTGGTGGAGCCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTC
ATTGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAG
AACCTGTCCTTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGT
CAGTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAA
AGATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATA
GTGGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGG
GTTATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTC
TGTTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGT
TTGCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATG
GATTGTGATAGAGTTATAGTTGTTGATGCAGGATGGGCGAAAGAATTTGG
CAGCCATCCAGGTTGCTTGAGAGCCATCACTCTTTGGAGCATTGGTGCAG
GAGTATGCCAACCGATCGGCAGAACTGTAGGAACAATCCTTTGCACTTGA
TGNTGGGTGAAAAGAGTTTTCTGTGATGGAATGCCTATGAGTTTAGGACC
ACCTGTGACTGGCATGAAAGATCACATTCCTCGCTCAAAGGTGCAGCAAA
GAACTTCTTCTGATATGCATGGAATTTAGTAATACTCT
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