EY756536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.389e-38 Identity = 80/216 (37.04%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL RY +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ FA CT+I HRI +++C R +V++ +++ S Sbjct: 1213 VKDLTARYLDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHRIEAMLECQRFLVIEENNVRQYDS 1427
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 5.389e-38 Identity = 80/216 (37.04%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ RLV R+ FG+IPQ+ +F GT R N+DP GQ++D+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L+ +++L +DE +A +D T I+R +++ FA CT+I HRI +++C R +V++ ++F S Sbjct: 1215 VKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLVNTEGEIQIDGVSWDSIPLQEWRRA-FGVIPQKVFIFSGTFRKNLDPYGQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLRKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHRIEAMLECQRFLVIEDSRLRQFES 1429
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.192e-38 Identity = 79/216 (36.57%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL RY + +L+ I+ SI G+++G++GRTG+GKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ FA CT+I HRI +++C R +V++ +++ S Sbjct: 1214 VKDLTARYIDSGNAILENISFSISPGQRVGLLGRTGAGKSTLLSAFLRLLN-TEGDIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHRIEAMLECQRFLVIEENKVRQYDS 1428
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_ORNAN (Cystic fibrosis transmembrane conductance regulator OS=Ornithorhynchus anatinus GN=CFTR PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 9.192e-38 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y P +L I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F G+ R N+DP GQ++D+E+WK E LK V+ P +LD ++ D G S G RQL+CL R +L +++L +DE +A +D T I++ +++ F CT+I HRI +++C R +V++ +++ S Sbjct: 1214 VQDLTAKYLDGGPAILDNISFSISSGQRVGLLGRTGSGKSTLLFAFLRLLN-TEGDIRIDGISWDAVPVQQWRKAFGVIPQKVFIFSGSFRKNLDPYGQWTDQELWKVAEEVGLKSVIEQFPGQLDFVLIDGGYVLSHGHRQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFTNCTVILSEHRIEAMLECQRFLVIEENKVRQYES 1428 HSP 2 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 51/206 (24.76%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 43 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 P VLK I+ I G+ + V G TG+GK++L+ + +EP R PQ + GT++ NI G DE ++S ++ CQL++ ++ +K ++++ + G S GQR + L R + K + L +D +D T+ EI + + + A T I + ++ + D+++++ G +G+ Sbjct: 438 PPVLKDISFKIEKGQLLAVAGSTGAGKTSLLMMIMGELEP-------------LEGKIKHSGRISFSPQFSWIMPGTIKENI-VFGVSFDEYRYRSVIKACQLEEEISKFAEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSCYFYGA 629
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_ATEAB (Cystic fibrosis transmembrane conductance regulator OS=Atelerix albiventris GN=CFTR PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.201e-37 Identity = 79/216 (36.57%), Postives = 127/216 (58.80%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y + +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q++D+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R I++ FA CT+I HRI +++C R +V++ +++ S Sbjct: 1215 VKDLTAKYIESGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTIKQAFADCTVILCEHRIEAMLECQRFLVIEENKVRQYDS 1429
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.568e-37 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ FA CT+I HRI +++C + +V++ +++ S Sbjct: 1212 VKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1426
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_HUMAN (Cystic fibrosis transmembrane conductance regulator OS=Homo sapiens GN=CFTR PE=1 SV=3) HSP 1 Score: 156.762 bits (395), Expect = 1.568e-37 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ FA CT+I HRI +++C + +V++ +++ S Sbjct: 1212 VKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1426
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_GORGO (Cystic fibrosis transmembrane conductance regulator OS=Gorilla gorilla gorilla GN=CFTR PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.568e-37 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ FA CT+I HRI +++C + +V++ +++ S Sbjct: 1212 VKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1426
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: ABC1_SCHPO (ATP-binding cassette transporter abc1 OS=Schizosaccharomyces pombe GN=abc1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.568e-37 Identity = 89/224 (39.73%), Postives = 125/224 (55.80%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDK--------LDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 +++L V Y VL+ I L I EKI +VGRTGSGKST+ R R R +IPQ+PVL GTVRSN+DP +Y D E+ + L+ + +V A LD+ V G N+S GQRQ+L L R +++ SR++ +DE+TASVD TD IQ+++R F T++ IAHRI T++D D+V+V+D+G EFGS Sbjct: 1182 IKNLTVSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLRAAFKHATVLCIAHRIKTIVDYDKVLVLDSGKTVEFGS 1405
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: CFTR_SHEEP (Cystic fibrosis transmembrane conductance regulator OS=Ovis aries GN=CFTR PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 2.675e-37 Identity = 79/216 (36.57%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654 V+DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ FA CT+I HRI +++C R +V++ +++ S Sbjct: 1213 VKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDS 1427 The following BLAST results are available for this feature:
BLAST of EY756536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756536 ID=EY756536; Name=EY756536; organism=Citrus sinensis; type=EST; length=888bpback to top |