EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_PROMH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Proteus mirabilis (strain HI4320) GN=ribB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.546e-30
Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDP 816
            +  A+E +R GK               ++  A+  T E MA  ++HG+GIVCV +  E  ++LDLP+MV  + N     TAFTVT++A  G TTGVSA DR TTV   A+ ++KP   +RPGH+FPL+ + GG L R GHTEAS   A LAGF P
Sbjct:   16 VERALEALRAGKGVMVLDDENRENEGDMVFVAETMTTEQMAMSIRHGSGIVCVCITEERRQQLDLPMMV--ENNTSHFHTAFTVTIEAAQGVTTGVSAADRLTTVRAAAADNAKPSDLNRPGHVFPLRAQPGGVLTRGGHTEASIDLATLAGFKP 168          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_EDWI9 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Edwardsiella ictaluri (strain 93-146) GN=ribB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.325e-30
Identity = 70/156 (44.87%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  A+  +R G+               +I AA+  T E MA  ++HG+GIVC+ +     ++LDLP+MV+   N     TAFTVT++A  G TTGVSA+DR TTV    + D+KPG  HRPGH+FPL+ R GG L R GHTEA+     LAGF PA
Sbjct:   16 VERALSALRDGRGVMVLDDENRENEGDMIFAAEKMTVEQMALTIRHGSGIVCLCITEARRQQLDLPMMVSN--NTSHYGTAFTVTIEAAEGVTTGVSAQDRLTTVRAAIADDAKPGDLHRPGHVFPLRARPGGVLARRGHTEATIDLVSLAGFRPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ENT38 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Enterobacter sp. (strain 638) GN=ribB PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.343e-30
Identity = 68/156 (43.59%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  A++ +R+G+               +I AA+  T E MA  ++HG+GIVC+ +  E  ++LDLP+MV  + N     T FTVT++A HG TTGVSA DR TTV    +  +KP   HRPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   16 VEHALDALREGRGVMVLDDEHRENEGDMIFAAENMTVEQMALTIRHGSGIVCLCINEERRKQLDLPMMV--ENNTSAFGTGFTVTIEAAHGVTTGVSAADRLTTVRAAIADGAKPSDLHRPGHVFPLRAQAGGVLTRGGHTEATLDLVTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOE4 (Riboflavin biosynthesis protein ribBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.343e-30
Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F SI  A+ DI  GK               LI AA+ ATPE +AF+V++ +G +CV + G+D +RL LP M A   N +K  TA+TVTVDA+ G  TG+SA DRA T+  LA+ +S    F RPGH+ PL+ +EGG L+R GHTEA+   A +A   PA
Sbjct:    4 FDSIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLDGDDCDRLGLPPMYAT--NQDKHGTAYTVTVDAREGIGTGISASDRAATMRLLANPESGANDFTRPGHVVPLRAKEGGVLRRPGHTEAAVDLARMADLRPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_YERE8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ribB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.407e-30
Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  AI+ +R G+               ++ AA+  T E MA  ++HG+GIVC+ +  E  ++LDLP+MVA   N  +  TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEAS   A LAG+ PA
Sbjct:   16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTVEQMALTIRHGSGIVCLCITDERRQQLDLPMMVAN--NSSQFQTAFTVTIEAAKGVTTGVSAADRLTTIRAAIADNAKPTDLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_CLONN (Riboflavin biosynthesis protein ribBA OS=Clostridium novyi (strain NT) GN=ribBA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29
Identity = 72/159 (45.28%), Postives = 97/159 (61.01%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F++I EAIEDI+ GK               L+MAA+  TPEA+ F+ K+  G++C+ M  E L+ LDL  MV    + ++  TAFTV++D+    TTG+SA +RA T+       +K   F RPGHIFPL+ R+GG LKRAGHTEA+   A LAG  PA
Sbjct:    6 FNTIEEAIEDIKNGKMVVVVDDEDRENEGDLLMAAEKVTPEAINFMAKYARGLICMPMTEEKLKELDLYQMVINNTDTKE--TAFTVSIDSVE-TTTGISAFERALTITKAVEKGAKAKDFQRPGHIFPLRARKGGVLKRAGHTEAAVDLATLAGLTPA 161          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_YERPY (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ribB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.650e-29
Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  AI+ +R G+               ++ AA+  T E MA  ++HG+GIVC+ +  E  ++LDLP+MV    N  +  TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEAS   A LAG+ PA
Sbjct:   16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_YERPS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pseudotuberculosis GN=ribB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.650e-29
Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  AI+ +R G+               ++ AA+  T E MA  ++HG+GIVC+ +  E  ++LDLP+MV    N  +  TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEAS   A LAG+ PA
Sbjct:   16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_YERPP (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pestis (strain Pestoides F) GN=ribB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.650e-29
Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  AI+ +R G+               ++ AA+  T E MA  ++HG+GIVC+ +  E  ++LDLP+MV    N  +  TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEAS   A LAG+ PA
Sbjct:   16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_YERPN (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ribB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.650e-29
Identity = 67/156 (42.95%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  AI+ +R G+               ++ AA+  T E MA  ++HG+GIVC+ +  E  ++LDLP+MV    N  +  TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEAS   A LAG+ PA
Sbjct:   16 VERAIDALRNGRGVMVLDDESRENEGDMVFAAEAMTLEQMALTIRHGSGIVCLCITDERRQQLDLPMMVTH--NSSQFQTAFTVTIEAAEGVTTGVSAADRLTTIRKAIADNAKPADLNRPGHVFPLRGQPGGVLSRRGHTEASIDLATLAGYKPA 169          
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBB_PROMH2.546e-3045.163,4-dihydroxy-2-butanone 4-phosphate synthase OS=P... [more]
RIBB_EDWI93.325e-3044.873,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ENT384.343e-3043.593,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBBA_RHOE44.343e-3045.91Riboflavin biosynthesis protein ribBA OS=Rhodococc... [more]
RIBB_YERE87.407e-3043.593,4-dihydroxy-2-butanone 4-phosphate synthase OS=Y... [more]
RIBBA_CLONN1.264e-2945.28Riboflavin biosynthesis protein ribBA OS=Clostridi... [more]
RIBB_YERPY1.650e-2942.953,4-dihydroxy-2-butanone 4-phosphate synthase OS=Y... [more]
RIBB_YERPS1.650e-2942.953,4-dihydroxy-2-butanone 4-phosphate synthase OS=Y... [more]
RIBB_YERPP1.650e-2942.953,4-dihydroxy-2-butanone 4-phosphate synthase OS=Y... [more]
RIBB_YERPN1.650e-2942.953,4-dihydroxy-2-butanone 4-phosphate synthase OS=Y... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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