EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_ACTPJ (Riboflavin biosynthesis protein ribBA OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=ribBA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.770e-23
Identity = 64/166 (38.55%), Postives = 94/166 (56.63%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNT-TGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXFCVRL 837
            FS + +AIE IRQGK                I AA+ ATPE + F+  +G G++C  +  E  ++L+   MVA  +++ +  TAFTV+VD  H +T TG+SA +R+ T + +   ++K   F  PGH+FPL  ++GG L R GHTEA+   A LAG   A  C  +
Sbjct:    6 FSKVEDAIEAIRQGKIILVTDDEDRENEGDFICAAEFATPENINFMATYGKGLICTPISTEIAKKLNFHPMVAVNQDNHE--TAFTVSVD--HIDTGTGISAFERSITAMKIVDDNAKATDFRCPGHMFPLIAKDGGVLVRNGHTEATVDLARLAGLKHAGLCCEI 167          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_VIBVY (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=ribB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  433 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +I + +  T   MA +++  +GIVC+ +  E   +L+LP MV    +  +  TAFTV+++AK G TTGVSA+DR TT+ T A+  +K     RPGH+FPL+ R GG L R GHTE +     +AG  PA
Sbjct:   44 IIYSVEHLTNAQMALMIRECSGIVCLCLTDEHANKLELPPMVVNNNSANQ--TAFTVSIEAKQGVTTGVSAQDRVTTIKTAANPSAKADDLARPGHVFPLRARPGGVLARRGHTEGTVDLMQMAGLQPA 170          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_VIBVU (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Vibrio vulnificus GN=ribB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = 1
Query:  433 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +I + +  T   MA +++  +GIVC+ +  E   +L+LP MV    +  +  TAFTV+++AK G TTGVSA+DR TT+ T A+  +K     RPGH+FPL+ R GG L R GHTE +     +AG  PA
Sbjct:   44 IIYSVEHLTNAQMALMIRECSGIVCLCLTDEHANKLELPPMVVNNNSANQ--TAFTVSIEAKQGVTTGVSAQDRVTTIKTAANPSAKADDLARPGHVFPLRARPGGVLARRGHTEGTVDLMQMAGLQPA 170          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_PHOPR (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Photobacterium profundum GN=ribB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.145e-22
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDP 816
            F  +   +  IR+G+               +I AA+  T E MA +++  +GIVC+ +  E +++L+LP+MV    +  +  T FTVT++A  G TTGVSA DR TT+ T  +  + P   + PGH+FPLK    G L R GHTEA+     L+G  P
Sbjct:   13 FERVEAGLTAIREGRGVLVVDDEDRENEGDIIFAAETLTSEQMALMIRECSGIVCLCLTDERVKQLELPMMVENNTSANE--TGFTVTIEAAKGVTTGVSAADRVTTIKTAIADGAVPADLNHPGHVFPLKANADGVLGRRGHTEATIDLMRLSGLKP 168          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_WOLSU (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Wolinella succinogenes GN=ribB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.954e-22
Identity = 64/155 (41.29%), Postives = 87/155 (56.13%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDP 816
            + EAIE I++G+               L+ AA  +TPE + F+V    G+VCV +     +RL L  MV  +EN+ +  TAFTV++DA+  +T G+SA +R  T+  +    SKP  F RPGHIFPL  +EGG L R GHTE S     LAG  P
Sbjct:    6 VREAIEAIKKGEMIIMMDDEDRENEGDLVYAAAFSTPEKVNFMVSEAKGLVCVCVTSTCSDRLGLAPMV--RENNSQHETAFTVSIDARECST-GISAFERDLTIRKMVDGTSKPEDFVRPGHIFPLIAKEGGVLVRTGHTEGSVDICKLAGVAP 157          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_DESDG (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfovibrio desulfuricans (strain G20) GN=ribB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.552e-22
Identity = 58/155 (37.42%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDP 816
            +  A++ +R+G                LI AA+  +   MA +++  +GIVC+ +  E +  L LP+MV  + N  +  TAFTV+++A  G +TGVSA DR  T+    + D+ P    RPGH+FPL+ R GG L+R GHTEA+     LAG  P
Sbjct:   16 VEAALDALRRGHGVLVTDDEDRENEGDLIFAAETLSDSQMAMLIRECSGIVCLCLTDEKVRALGLPMMV--ENNSSQYQTAFTVSIEASCGVSTGVSAADRVCTIQAAIADDACPSDLCRPGHVFPLRARPGGVLERRGHTEATVDLMRLAGLKP 168          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_OCEIH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Oceanobacillus iheyensis GN=ribB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.333e-22
Identity = 62/160 (38.75%), Postives = 86/160 (53.75%), Query Frame = 1
Query:  346 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXF 825
            S I +AIED+R GK               L+  ++  TPE + F+ K+G G++CV +  E    LDL  M     N +   T FTV+VD  + N+TG+S  DRA T+  LA   SK   F RPGH+FPL  +  G L+R GHTEA+   A L+   P+ +
Sbjct:    5 SKIEQAIEDLRNGKLIIVADDADREAEGDLVGLSEFVTPEKVNFMTKYGRGLICVPITEERALELDLHAMATN--NTDTYGTQFTVSVDY-YTNSTGISTADRADTIRALAEPLSKAADFKRPGHMFPLIAKNAGVLERRGHTEAAVDLARLSNSIPSAY 161          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_DESAH (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=ribB PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.353e-22
Identity = 57/129 (44.19%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  433 LIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            LI  A   T E +A +++  +GI+C+ +  E +E+L LP MV    N     TAFT++++A  G TTGVSA DRATT+   A+ D++P   H PGH+FPL+  E G L R GHTE +     LAG  PA
Sbjct:   43 LIFPAGNITAEQVALLIRECSGIICLCLPPERIEQLGLPQMVTC--NTSAYQTAFTISIEAAEGVTTGVSAADRATTIRCAAALDARPEDIHSPGHVFPLRAVEQGVLGRRGHTEGTVDLMRLAGLAPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_PROVI (Riboflavin biosynthesis protein ribBA OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ribBA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.353e-22
Identity = 64/157 (40.76%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  349 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDA-KHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDP 816
            +I  A+EDI QGK                I AA   T E + FI K   G++CV++  +  + L L  MV +  +  +  T FTV+VDA   G TTG+S  DRA T+  L    S    F RPGHIFPL+  +GG L+R GHTEA+   A LAG  P
Sbjct:    8 TIESALEDIGQGKLVIVIDDEERENEGDFIAAADKVTTEMINFITKEARGLLCVAVTMDRAKELQLEPMVQRNTSQHE--TNFTVSVDAIAEGVTTGISVYDRAMTIKMLGDETSHADSFSRPGHIFPLRAMDGGVLRRVGHTEAAVDLARLAGCSP 162          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_METLZ (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=ribB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22
Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXFCVRL 837
            F++I EA++ ++ G+               LI AA+ AT E + F+ K+G G++C+ M    +E+L LP MV +  ++ +  TAFTV++D     TTG+SA +R  T       +++P  F RPGH+FPL+ ++ G  +R GHTEA+     LAG   A  C  +
Sbjct:    4 FNTIEEALKSLQNGEMIIVTDDENRENEGDLICAAEYATTENVNFMAKYGRGLICMPMGRSLVEKLCLPPMVLKNTDNHE--TAFTVSIDHVD-TTTGISAVERGITARKCIDPNARPEDFRRPGHMFPLQAKDNGVFEREGHTEATVDLMKLAGLREAGLCCEI 165          
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBBA_ACTPJ8.770e-2338.55Riboflavin biosynthesis protein ribBA OS=Actinobac... [more]
RIBB_VIBVY1.145e-2242.643,4-dihydroxy-2-butanone 4-phosphate synthase OS=V... [more]
RIBB_VIBVU1.145e-2242.643,4-dihydroxy-2-butanone 4-phosphate synthase OS=V... [more]
RIBB_PHOPR1.145e-2236.713,4-dihydroxy-2-butanone 4-phosphate synthase OS=P... [more]
RIBB_WOLSU1.954e-2241.293,4-dihydroxy-2-butanone 4-phosphate synthase OS=W... [more]
RIBB_DESDG2.552e-2237.423,4-dihydroxy-2-butanone 4-phosphate synthase OS=D... [more]
RIBB_OCEIH3.333e-2238.753,4-dihydroxy-2-butanone 4-phosphate synthase OS=O... [more]
RIBB_DESAH4.353e-2244.193,4-dihydroxy-2-butanone 4-phosphate synthase OS=D... [more]
RIBBA_PROVI4.353e-2240.76Riboflavin biosynthesis protein ribBA OS=Prostheco... [more]
RIBB_METLZ9.697e-2235.153,4-dihydroxy-2-butanone 4-phosphate synthase OS=M... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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