EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAW (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MW2) GN=ribBA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+  ++ G+               L+   +      + F+ K   G++C  +  +  +RLDL  MV   +N +   T FTV++D     TTG+SA +R  T   L    S+   F+RPGH+FPL  ++ G L R GHTEA+   A L G  PA
Sbjct:    3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPA 158
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAS (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MSSA476) GN=ribBA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+  ++ G+               L+   +      + F+ K   G++C  +  +  +RLDL  MV   +N +   T FTV++D     TTG+SA +R  T   L    S+   F+RPGH+FPL  ++ G L R GHTEA+   A L G  PA
Sbjct:    3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPA 158
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAR (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain MRSA252) GN=ribBA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+  ++ G+               L+   +      + F+ K   G++C  +  +  +RLDL  MV   +N +   T FTV++D     TTG+SA +R  T   L    S+   F+RPGH+FPL  ++ G L R GHTEA+   A L G  PA
Sbjct:    3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPA 158
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAN (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain N315) GN=ribBA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+  ++ G+               L+   +      + F+ K   G++C  +  +  +RLDL  MV   +N +   T FTV++D     TTG+SA +R  T   L    S+   F+RPGH+FPL  ++ G L R GHTEA+   A L G  PA
Sbjct:    3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPA 158
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAM (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ribBA PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.356e-15
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+  ++ G+               L+   +      + F+ K   G++C  +  +  +RLDL  MV   +N +   T FTV++D     TTG+SA +R  T   L    S+   F+RPGH+FPL  ++ G L R GHTEA+   A L G  PA
Sbjct:    3 FDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPA 158
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_STAAC (Riboflavin biosynthesis protein ribBA OS=Staphylococcus aureus (strain COL) GN=ribBA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.313e-15
Identity = 51/159 (32.08%), Postives = 77/159 (48.43%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+  ++ G+               L+   +      + F+ K   G++C  +  +  +RLDL  MV   +N +   T FTV++D     TTG+SA +R  T   L    S+   F+RPGH+FPL  ++ G L R GHTEA+   A L G  PA
Sbjct:    3 FDNIDSALMALKNGEPIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMV--DDNSDIFGTQFTVSIDHVD-TTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPA 158
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBBA_STAAW1.356e-1532.08Riboflavin biosynthesis protein ribBA OS=Staphyloc... [more]
RIBBA_STAAS1.356e-1532.08Riboflavin biosynthesis protein ribBA OS=Staphyloc... [more]
RIBBA_STAAR1.356e-1532.08Riboflavin biosynthesis protein ribBA OS=Staphyloc... [more]
RIBBA_STAAN1.356e-1532.08Riboflavin biosynthesis protein ribBA OS=Staphyloc... [more]
RIBBA_STAAM1.356e-1532.08Riboflavin biosynthesis protein ribBA OS=Staphyloc... [more]
RIBBA_STAAC2.313e-1532.08Riboflavin biosynthesis protein ribBA OS=Staphyloc... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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