EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_THEPX (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter sp. (strain X514) GN=ribBA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.676e-29
Identity = 81/177 (45.76%), Postives = 105/177 (59.32%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA-XFCVRL***WFMARLPN 870
            F  I +AIEDI+QGK               L+MAA+  T E + F++K+G G+VCV M  + L  L +  MV  + N +   TAFTV+VD K   TTG+SA +RA TV  L   +SKP  F +PGHIFPL+ ++GG L RAGHTEA+   AVLAG  PA   C  +     MARLP+
Sbjct:    2 FDRIEDAIEDIKQGKMIIVVDDENRENEGDLVMAAEKVTGEHINFMIKYGRGLVCVPMTEKRLNELGIYQMV--ENNTDHKETAFTVSVDYKEC-TTGISAFERALTVKKLVDDNSKPEDFTKPGHIFPLRAKDGGVLVRAGHTEAAVDLAVLAGLKPAGVICEIIKDDGNMARLPD 175          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_THEP3 (Riboflavin biosynthesis protein ribBA OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ribBA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.676e-29
Identity = 81/177 (45.76%), Postives = 105/177 (59.32%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA-XFCVRL***WFMARLPN 870
            F  I +AIEDI+QGK               L+MAA+  T E + F++K+G G+VCV M  + L  L +  MV  + N +   TAFTV+VD K   TTG+SA +RA TV  L   +SKP  F +PGHIFPL+ ++GG L RAGHTEA+   AVLAG  PA   C  +     MARLP+
Sbjct:    2 FDRIEDAIEDIKQGKMIIVVDDENRENEGDLVMAAEKVTGEHINFMIKYGRGLVCVPMTEKRLNELGIYQMV--ENNTDHKETAFTVSVDYKEC-TTGISAFERALTVKKLVDDNSKPEDFTKPGHIFPLRAKDGGVLVRAGHTEAAVDLAVLAGLKPAGVICEIIKDDGNMARLPD 175          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_RHOSR (Riboflavin biosynthesis protein ribBA OS=Rhodococcus sp. (strain RHA1) GN=ribBA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.676e-29
Identity = 73/159 (45.91%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F SI  A+ DI  GK               LI AA+ ATPE +AF+V++ +G +CV + G D +RL LP M A   N +K  TA+TVTVDA+ G  TG+SA DRA T+  LA   S    F RPGH+ PL+ +EGG L+R GHTEA+   A +A   PA
Sbjct:    4 FDSIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLDGADCDRLGLPPMYAT--NQDKHGTAYTVTVDAREGIGTGISASDRAATMRLLADPSSGAQDFTRPGHVVPLRAKEGGVLRRPGHTEAAVDLARMADLRPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_PSEAE (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Pseudomonas aeruginosa GN=ribB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.271e-29
Identity = 73/158 (46.20%), Postives = 93/158 (58.86%), Query Frame = 1
Query:  346 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            ++I E IEDIRQGK               LIMAA+    E + F+VKH  G+VC+ M  E  ERL LPLMV  + N     T FTV+++A  G TTG+SA DRA TV   A+ ++       PGHIFPL  + GG L RAGHTEA+   A +AGF+P+
Sbjct:    4 NTIDELIEDIRQGKMVILMDDEDRENEGDLIMAAECVRTEDINFMVKHARGLVCMPMTRERCERLGLPLMV--QRNGSGFGTKFTVSIEAAEGVTTGISAADRARTVQAAAAKNAVAADIVSPGHIFPLMAQPGGTLARAGHTEAACDLARMAGFEPS 159          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SERP5 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Serratia proteamaculans (strain 568) GN=ribB PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.190e-29
Identity = 65/156 (41.67%), Postives = 93/156 (59.62%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  A+E +R G+               +I AA+  T E MA  ++HG+GIVC+ +  E  ++L+LP+MV    N  +  TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEA+     +AGF PA
Sbjct:   16 VERALEALRNGRGVMVLDDENRENEGDMIFAAETMTVEQMALTIRHGSGIVCLCLTEERRQQLELPMMVTN--NSSQFQTAFTVTIEAAQGVTTGVSASDRLTTIRAAVADNAKPSDLNRPGHVFPLRAQPGGVLSRRGHTEATIDLVSMAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_KLEP3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Klebsiella pneumoniae (strain 342) GN=ribB PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.190e-29
Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I AA+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVEHALDALREGRGVMVLDDEDRENEGDMIFAAETMTVEQMALTIRHGSGIVCLCLTEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIADGAKPSDLNRPGHVFPLRAQPGGVLTRGGHTEATIDLVTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLTR (Riboflavin biosynthesis protein ribBA OS=Chlamydia trachomatis GN=ribBA PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.070e-28
Identity = 71/166 (42.77%), Postives = 94/166 (56.63%), Query Frame = 1
Query:  340 GFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXFCVRL 837
            G +S+ +AI+D+ +GKF              LI+A +  + E M+F++ H TGIVC S+  E  + LDLP MV  ++N     TAFTV+VDA  G TTGVSA DR  TV  LA   +    F RPGH+FPL  + GG ++R GHTEA+     LAG  P      L
Sbjct:    7 GIASVQQAIKDVAEGKFVIVIDAASRENEGDLILAGEKVSTEKMSFLLSHTTGIVCASLSREQAKSLDLPAMV--QDNQCAFKTAFTVSVDASSGVTTGVSASDRTRTVQLLADPAATAESFVRPGHVFPLISQPGGAVQRPGHTEAAMDLMRLAGMQPCGIFAEL 170          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_CITK8 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ribB PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.397e-28
Identity = 66/159 (41.51%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   HRPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVEHALSALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAKGVTTGVSAADRVTTVRAAIADGAKPADLHRPGHVFPLRAQPGGVLTRGGHTEATIDLVTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA9 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.397e-28
Identity = 73/157 (46.50%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  349 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            SI  A+ DI  GK               LI AA+ ATPE +AF+V++ +G +CV + GED +RL L    A   N +K  TA+TVTVDAK+G  TG+SA DRA T+  LA   S    F +PGH+ PL+ ++GG L+R GHTEAS   A LAG  PA
Sbjct:    6 SIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGEDCDRLGLLPQYAV--NQDKHGTAYTVTVDAKNGIGTGISASDRAATMRLLADAASTADDFTKPGHVVPLRAKDGGVLRRPGHTEASVDLAKLAGLRPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLMU (Riboflavin biosynthesis protein ribBA OS=Chlamydia muridarum GN=ribBA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.397e-28
Identity = 75/166 (45.18%), Postives = 91/166 (54.82%), Query Frame = 1
Query:  340 GFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXFCVRL 837
            G +S+ +AI+DI  G F              LI+A +  + E MAF++ H TGIVC S+  E    LDLP MV  +EN     TAFTV+VDA  G TTGVSA DR  TV  L+   S    F RPGH+FPL  + GG +KR GHTEAS     LAG  P      L
Sbjct:    7 GIASVQQAIKDIADGNFVIVIDRESRENEGDLILAGEKVSAEKMAFLLSHTTGIVCASVTREQARVLDLPAMV--QENQCAFKTAFTVSVDASSGITTGVSAADRTRTVQLLSDPTSISQSFVRPGHVFPLVSQPGGVVKRPGHTEASMDLMRLAGMYPCGIFAEL 170          
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBBA_THEPX3.676e-2945.76Riboflavin biosynthesis protein ribBA OS=Thermoana... [more]
RIBBA_THEP33.676e-2945.76Riboflavin biosynthesis protein ribBA OS=Thermoana... [more]
RIBBA_RHOSR3.676e-2945.91Riboflavin biosynthesis protein ribBA OS=Rhodococc... [more]
RIBB_PSEAE6.271e-2946.203,4-dihydroxy-2-butanone 4-phosphate synthase OS=P... [more]
RIBB_SERP58.190e-2941.673,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_KLEP38.190e-2941.513,4-dihydroxy-2-butanone 4-phosphate synthase OS=K... [more]
RIBBA_CHLTR1.070e-2842.77Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBB_CITK81.397e-2841.513,4-dihydroxy-2-butanone 4-phosphate synthase OS=C... [more]
RIBBA_MYCA91.397e-2846.50Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]
RIBBA_CHLMU1.397e-2845.18Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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