EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_SALTO (Riboflavin biosynthesis protein ribBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.824e-28
Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I +A+ +I  G+               LI AA+LATPE +AF+V++ +G +C S+  +D +RLDLP M     N ++  TA+ VTVDA+ G +TG+SA DRA  +  LA   + P    RPGH+ PL+ REGG L+R GHTEA+     LAG  PA
Sbjct:    4 FGTIEQAMAEILAGRPVVVVDDANRENEGDLIFAAELATPELVAFMVRYTSGYICASLTEDDCDRLDLPPM--HHTNQDRRGTAYMVTVDARKGVSTGISAADRARVIRLLADPSTTPDDLARPGHVVPLRAREGGVLRRTGHTEAATDLTRLAGLRPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ECOSM (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.383e-28
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    + D+KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADDAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ECOLU (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.383e-28
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    + D+KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADDAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_BACWK (Riboflavin biosynthesis protein ribBA OS=Bacillus weihenstephanensis (strain KBAB4) GN=ribBA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.383e-28
Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  I EA+ED++QGK                I  A+  TPE + F++ HG G+VCV +  E  ERL L  MV+   N +   TAFTV++D     TTG+SA +RATT+  L +  SK   F+RPGHIFPL  +EGG L+RAGHTEA+   A L G +PA
Sbjct:    2 FHRIEEALEDLKQGKVVIVCDDENRENEGDFIALAEYITPETINFMITHGRGLVCVPITEEYAERLQLEPMVSH--NTDSHHTAFTVSIDHV-STTTGISAHERATTIQELLNPASKGSDFNRPGHIFPLIAKEGGVLRRAGHTEAAVDLAKLCGAEPA 157          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCVP (Riboflavin biosynthesis protein ribBA OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=ribBA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.112e-28
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  349 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            S+  A+ DI  GK               LI AA+ ATPE +AF+V++ +G +CV + G+  +RL L  M A   N +K  TA+TVTVDAK G  TG+SA DRATT+  LA  D+    F +PGH+ PL+ ++GG L+R GHTEA+   A LAG  PA
Sbjct:    6 SVERAVADIAAGKAVVVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGDICDRLGLLPMYAV--NQDKHGTAYTVTVDAKKGVGTGISAMDRATTMRLLADPDAVADDFTKPGHVVPLRAKDGGVLRRPGHTEAAVDLARLAGLQPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_PHOLE (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Photobacterium leiognathi GN=ribB PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28
Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 1
Query:  346 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXFCVRL 837
            SS  E I+DIRQG+               LI+A+++ TPEA+ F+  HG G++C+++     + L+LPLMV  + N++   T FT++++A    TTG+SA DRA TVL   + ++K      PGHIFPL  ++GG L RAGHTEA    A LAG +P+   V +
Sbjct:    4 SSAKEIIDDIRQGRMVILMDDESRENEGDLIIASEMVTPEAINFMATHGRGLICLTLSKARCKTLNLPLMV--QGNNDNFSTPFTISIEAAKYVTTGISASDRAKTVLAAVAPNAKSTDIVMPGHIFPLMAQDGGVLIRAGHTEAGCDVARLAGLEPSSVIVEI 165          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIB3_CANAL (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Candida albicans GN=RIB3 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28
Identity = 70/162 (43.21%), Postives = 96/162 (59.26%), Query Frame = 1
Query:  334 TEGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            T  F+ I EA+E  + G+F              LIMAA+L T E MAF+V++ +G VCV +  E   +L+LP M+A +   ++  TA+T+T D   G TTG+SA DRA T  +LA+ +SKP  F +PGHI PL+   G   KR GHTEA+   + LAG  PA
Sbjct:    2 TNIFTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLANRS--DRHGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPA 161          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNY3 (Riboflavin biosynthesis protein ribBA OS=Synechocystis sp. (strain PCC 6803) GN=ribBA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.308e-28
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKH--GNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I  A+ DI+ GK               LI AAQ ATP  + F+     G++C++M G+ L+ LDLPLMV++  +  +  TAFTV++DA    G TTG+SA DRA T+    +  ++P    RPGHIFPL+ + GG LKRAGHTEA+   + LAG  PA
Sbjct:    2 FDAIDAALADIKAGKAVVVVDDENRENEGDLICAAQFATPALVNFMAVEARGLICLAMTGDRLDELDLPLMVSKNTDSNQ--TAFTVSIDAAPHLGVTTGISAEDRARTIQIAINPVTRPEDLSRPGHIFPLRAKTGGVLKRAGHTEAAVDLSRLAGLYPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALPK (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=ribB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A++ T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAEIMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALPA (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi A GN=ribB PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A++ T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAEIMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBBA_SALTO1.824e-2842.77Riboflavin biosynthesis protein ribBA OS=Salinispo... [more]
RIBB_ECOSM2.383e-2841.513,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECOLU2.383e-2841.513,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBBA_BACWK2.383e-2845.28Riboflavin biosynthesis protein ribBA OS=Bacillus ... [more]
RIBBA_MYCVP3.112e-2845.22Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]
RIBB_PHOLE4.065e-2840.853,4-dihydroxy-2-butanone 4-phosphate synthase OS=P... [more]
RIB3_CANAL4.065e-2843.213,4-dihydroxy-2-butanone 4-phosphate synthase OS=C... [more]
RIBBA_SYNY35.308e-2843.48Riboflavin biosynthesis protein ribBA OS=Synechocy... [more]
RIBB_SALPK6.933e-2840.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPA6.933e-2840.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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