EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_SALAI (Riboflavin biosynthesis protein ribBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F +I +A+ +I  G+               LI AA+LATPE +AF+V++ +G +C  +  ++ +RLDLP M     N ++  TA+TVTVDA+ G +TG+SA DRA T+  LA   + P    RPGH+ PL+ R+GG L+R GHTEA+     LAG  PA
Sbjct:    4 FGTIEQAMAEIVAGRPVVVVDDANRENEGDLIFAAELATPELVAFMVRYTSGYICAPLTEDECDRLDLPPM--HHTNQDRRGTAYTVTVDAREGVSTGISAADRAHTIRLLADPRTGPADLARPGHVVPLRARQGGVLRRPGHTEAAIDLTRLAGLRPA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_CORAM (Riboflavin biosynthesis protein ribBA OS=Corynebacterium ammoniagenes GN=ribBA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28
Identity = 75/157 (47.77%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  349 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            SI EAI DI  GK               LI AA+LATPE +AF+V++ +G +CV +  ED +RL+LP M+ +  N++   TA+TVTVDA  G TTG+SA  RA T+L LA   S    F RPGH+ PL  R  G L+R GHTEA+   A LAG  PA
Sbjct:   13 SIEEAIADIAAGKAVVVVDNEDRENEGDLIFAAELATPELVAFMVRYSSGYICVPLLPEDCKRLNLPPMMGR--NEDVRGTAYTVTVDANTG-TTGISATSRAETMLRLADPMSVVDDFTRPGHVVPLAARPNGVLERDGHTEAAIDLARLAGLRPA 166          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_PARD8 (Riboflavin biosynthesis protein ribBA OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ribBA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 72/165 (43.64%), Postives = 95/165 (57.58%), Query Frame = 1
Query:  346 SSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGN-TTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPAXFCVRL 837
            ++I EAIED R+GKF               I+AA+  TPE + F++K+G G++C  +  E  + L+L + VA   N   L T FT+TVD   G  TTGVS  DRA T+L LA   +KP    RPGHI PL+ R  G L+RAGHTEA+   A LAG  PA   + +
Sbjct:    7 NTIEEAIEDFREGKFLIVVDDEDRENEGDFIIAAEKVTPEKINFMLKNGRGVLCAPITEERCQELELDMQVAN--NTSLLGTPFTITVDKLGGKCTTGVSMYDRAETILALADPKTKPSDLGRPGHINPLRARSRGVLRRAGHTEAAVDLARLAGLYPAGALIEI 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCGI (Riboflavin biosynthesis protein ribBA OS=Mycobacterium gilvum (strain PYR-GCK) GN=ribBA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.055e-28
Identity = 72/157 (45.86%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  349 SIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            S+  A+ DI  GK               LI AA+ ATPE +AF+V++ +G +CV + GE  +RL L  M A   N +K  TA+TVTVDAK G  TG+SA DRATT+  LA  DS    F +PGH+ PL+ ++GG L+R GHTEA+   A LAG   A
Sbjct:    6 SVERAVADIAAGKAVVVIDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGEICDRLGLLPMYAV--NQDKHGTAYTVTVDAKVGVGTGISASDRATTMRLLADPDSVADDFTKPGHVVPLRAKDGGVLRRPGHTEAAVDLARLAGLQAA 160          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALAR (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ribB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.183e-27
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--QNNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_PHOLL (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=ribB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.183e-27
Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 1
Query:  352 IPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            +  AI  +R GK               +I AA+  T E MA  +++G+GIVC+ +  E  ++L LP+MV  + N     TAFTVT++A  G TTGVSA DR TT+    + ++KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   16 VEHAINALRDGKGVMVLDNEDRENEGDIIFAAETMTVEQMALTIRYGSGIVCLCLTEERRQQLQLPMMV--ENNSSPFQTAFTVTIEAAQGVTTGVSAADRITTIRAAIADNAKPSDLNRPGHVFPLRAQPGGVLVRQGHTEAAIDLVSLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ECOUT (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=ribB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.183e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ECOL6 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O6 GN=ribB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.183e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ECOK1 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O1:K1 / APEC GN=ribB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.183e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_ECO81 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Escherichia coli O81 (strain ED1a) GN=ribB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.183e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITDDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169          
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBBA_SALAI6.933e-2842.14Riboflavin biosynthesis protein ribBA OS=Salinispo... [more]
RIBBA_CORAM6.933e-2847.77Riboflavin biosynthesis protein ribBA OS=Corynebac... [more]
RIBBA_PARD89.055e-2843.64Riboflavin biosynthesis protein ribBA OS=Parabacte... [more]
RIBBA_MYCGI9.055e-2845.86Riboflavin biosynthesis protein ribBA OS=Mycobacte... [more]
RIBB_SALAR1.183e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_PHOLL1.183e-2742.313,4-dihydroxy-2-butanone 4-phosphate synthase OS=P... [more]
RIBB_ECOUT1.183e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECOL61.183e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECOK11.183e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]
RIBB_ECO811.183e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=E... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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