EY756528

Overview
NameEY756528
Unique NameEY756528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756528_ssr303 microsatellite EY756528_ssr303:303..314. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13569 contig Csv1_Contig13569:186..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SHIBS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SHIB3 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALTY (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella typhimurium GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALTI (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella typhi GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALSV (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALPC (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi C (strain RKS4594) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALPB (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALNS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella newport (strain SL254) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALHS (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella heidelberg (strain SL476) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
[Close]
BLAST of EY756528 vs. ExPASy Swiss-Prot
Match: RIBB_SALG2 (3,4-dihydroxy-2-butanone 4-phosphate synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ribB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 1 
Query:  343 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGNTTGVSARDRATTVLTLASXDSKPGGFHRPGHIFPLKYREGGXLKRAGHTEASXGSAVLAGFDPA 819
            F  +  A++ +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV       +KP   +RPGH+FPL+ + GG L R GHTEA+     LAGF PA
Sbjct:   13 FERVELALDALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRVTTVRAAIKDGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA 169
The following BLAST results are available for this feature:
BLAST of EY756528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
RIBB_SHIBS1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SHIB31.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALTY1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALTI1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALSV1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPC1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALPB1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALNS1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALHS1.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]
RIBB_SALG21.545e-2740.883,4-dihydroxy-2-butanone 4-phosphate synthase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756528 ID=EY756528; Name=EY756528; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTGTTAGTGGATTTCCCAGTACGAAGTCACTTTTGGCAAA
TGGGCACTCTTCATATTTGGCCTTTGTAAAGCTAGCTACTAAATCATCCA
TTAGTATCAAGGGTGTCGGCAAAACTAGAGCTACACTGATATCTGGAGAA
GGTGACCTTTTAGCTTATCCCAATGGCAATAACCTTGTGGCCGAAAGTAC
TGGTGCTGATGATCAATTGGTGGGGATTGAGTTACAACCGGATGCAATAG
CATTTGGAGCACTTGCAGCAGATACCGCTCCCACAACTTTTGGATTTTCC
AGTGATGATGATGAATTTGATTTGGATAGCCCTACAGAAGGTTTTTCTTC
TATCCCCGAGGCCATTGAAGACATTCGCCAAGGAAAGTTTGTCGTGGTCG
TGGATGATGAAGATAGAGAAAATGAGGGAGATCTTATAATGGCAGCACAG
CTCGCAACACCTGAAGCTATGGCATTTATTGTAAAACATGGAACTGGAAT
TGTTTGCGTGAGCATGAAGGGGGAAGATCTGGAGAGGCTGGATCTTCCTT
TAATGGTTGCACAAAAGGAAAATGATGAGAAACTTTGTACTGCATTCACA
GTGACAGTGGATGCAAAACATGGAAACACCACAGGGGTCTCAGCTCGTGA
TAGGGCAACAACTGTTTTGACTCTTGCTTCTANGGATTCAAAACCTGGGG
GATTTCATCGCCCGGGCCATATTTTTCCTCTGAAGTACAGAGAGGGTGGA
NGTCTGAAAAGAGCTGGTCATACAGAAGCTTCTGNTGGATCTGCTGTGCT
AGCTGGATTTGACCCTGCACANTTTTGTGTGAGGTTGTGATGATGATGGT
TCATGGCTAGATTACCAAACTCGGGATTTGCTAGAGGGAAATTAAANTAA
ATCATTGCTGATTAA
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