EY756497

Overview
NameEY756497
Unique NameEY756497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.361e-20
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  142 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIF-ALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVV 561
            +PE C++ V  + +P + C +A ++ + + AA SD VWE  LPS Y  L+     +   +LSKKEIF +L    V  ++G K  W+++ +G+ C  +S   + I   +   YW WI   ES+F  VA L+ + WFEV G +
Sbjct:   35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLV----LQSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKI 171          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.157e-19
Identity = 46/139 (33.09%), Postives = 80/139 (57.55%), Query Frame = 1
Query:  133 LGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIED-RRYWNWIPTEESRFHVVAYLQQIWWFE 546
            L  +PE C++ +  + +P + C  A ++  F  A  SD VWE  LP++Y+ L+    P R  +  K+  F+L + P+  +DG   +WL++ +G+ C+ +S  AM ++ + D  + + WIP  ESRF  VA L++ + FE
Sbjct:   24 LDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLI---TPSRVFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFE 159          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.567e-18
Identity = 55/204 (26.96%), Postives = 98/204 (48.04%), Query Frame = 1
Query:  142 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYLDKME 753
            +PE+CVA +  + TP +  + A ++  FR A  SD VWE  LP++Y  ++        +  SKKE++  L   +  D+G K   +++++G++   +S++ ++IT  + R YW+W P  +SRF     L    W E+ G  K    A     ++  +L  I K   R        +G D+ P        +G++     YL  ++
Sbjct:    2 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIFSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIG--KIQTGALSPNTNYGAYL--IMKVTSR-------AYGLDLVPAETSIKVGNGEKKIKSTYLSCLD 194          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.046e-18
Identity = 42/146 (28.77%), Postives = 77/146 (52.74%), Query Frame = 1
Query:  139 DIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFA-LLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPL 573
            D+PE C+A +  + +P + C ++ ++   R AA S++ WE  LPS+Y+  +D          S K++F      P+  +DG    W+++ +G+ C  +S + + I  ++   +W W+   +SRF  VA L  + WFE+ G +   L
Sbjct:    5 DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYID----NSLSRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSL 146          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.776e-18
Identity = 46/150 (30.67%), Postives = 79/150 (52.67%), Query Frame = 1
Query:  133 LGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPAD 582
            + ++PE C+A +    TP ++C L+ ++  FR AA SD VW + LP+++        P   L   K+  F+L+  P+  +       L+R +G  C  ++ +A+ I    ++RYW+WI    +RF  VA L  +WW E+ G +   L +D
Sbjct:    1 MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFP--AGFAAPAG-LPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSD 147          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B5_ARATH (F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.466e-16
Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  109 NGESMGPGLGDIPESCVACVFMYLTPPEICNLARL-NHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVV 561
            NG S      D+P+ C+A +  + + P    LA L + +F    +SDSVWE  LP    D + L+P  R  + SKKE++  L  P P  +G     LD+ +G+ C+ +S K + I+ + + +YW WI   ESRF  V  L  I  F++ GV+
Sbjct:   28 NGSSAS--FDDLPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPP--PDYVSLLPKSRVFS-SKKELYFALCDPFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWISIPESRFDEVPELLNIDSFDIRGVL 174          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.241e-15
Identity = 45/163 (27.61%), Postives = 77/163 (47.24%), Query Frame = 1
Query:   64 KLKIEMGASLSSLTDNGESMGPGLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRF-HVVAYLQQIWWFEV 549
            ++K  +  S S     G +    LGD+PE C++ +  + +P + C  A ++  F  A  SD VWE  +P  Y+ LL      ++ +  K+  FAL    V  +   K++W+++ TG+ C+ +S  A+    +     W WI    S +   V  L    WFE+
Sbjct:   17 RVKKTLRLSASDQQSQGVTEPLSLGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLS---RSQHFSSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASAL---NLSTHHTWKWITNPVSAWLETVPELLTTRWFEI 173          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.118e-15
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 1
Query:  142 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEI-FALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRY 474
            +PE+C++ +  + TP + C  A ++ AF  A  SDSVWE  LP +Y  L+    PE  + LSKKE+ F+L   P+  + G K  WLD+ +G  C+ +S K M I+ +   ++
Sbjct:   16 LPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLV----PESRVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2B14_ARATH (F-box protein PP2-B14 OS=Arabidopsis thaliana GN=PP2B14 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 52/200 (26.00%), Postives = 95/200 (47.50%), Query Frame = 1
Query:  142 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYL 741
            +PE+C+A +  + +P +  + + ++  FR A  SD VWE  LPS+Y+ L+       +   SKKEI+  L   +  D+  K   +++ +G++   +S + ++IT  +   YW+W    +SRF   A L      E++G ++      V + + R     I K         +  +G D+ P      + +GQ + S  YL
Sbjct:    4 LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSDSRFSESAELIITDRLEIEGKIQ----TRVLSANTRYGAYLIVKVT-------KGAYGLDLVPAETSIKSKNGQISKSATYL 192          
BLAST of EY756497 vs. ExPASy Swiss-Prot
Match: P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13
Identity = 51/200 (25.50%), Postives = 92/200 (46.00%), Query Frame = 1
Query:  142 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKEIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPADVYTVSFRLHLGKIAKRLGRRVCNFEHTHGWDIKPVRXEXSTSDGQQASSECYL 741
            +PE+CVA +  + +P +  + + ++  FR A  SD VWE  LPS+Y+ L+        +  SKKEI+  L   +  D+  K   +++ +G++   +S + ++IT  +   Y +W    +SRF   A L      E+ G ++  + +            K    L  +V N    +G D+ P      + +GQ   +  YL
Sbjct:    4 LPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIFSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSP---------NTKYGAYLIMKVTN--GAYGLDLVPAETSVKSKNGQNNKNTTYL 192          
The following BLAST results are available for this feature:
BLAST of EY756497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PP2B1_ARATH6.361e-2035.46F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP... [more]
SKIP3_ARATH3.157e-1933.09F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKI... [more]
P2B15_ARATH1.567e-1826.96F-box protein PP2-B15 OS=Arabidopsis thaliana GN=P... [more]
P2B12_ARATH2.046e-1828.77Putative F-box protein PP2-B12 OS=Arabidopsis thal... [more]
P2B11_ARATH7.776e-1830.67F-box protein PP2-B11 OS=Arabidopsis thaliana GN=P... [more]
PP2B5_ARATH1.466e-1634.87F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP... [more]
PP2B7_ARATH1.241e-1527.61F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP... [more]
PP2B3_ARATH2.118e-1536.61F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP... [more]
P2B14_ARATH3.612e-1526.00F-box protein PP2-B14 OS=Arabidopsis thaliana GN=P... [more]
P2B13_ARATH4.415e-1325.50F-box protein PP2-B13 OS=Arabidopsis thaliana GN=P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-C08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756497 ID=EY756497; Name=EY756497; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGAAGCGAAGAAGAAGAAGGGAAAAAAAGGCTTTGGTAAAT
TCAGTAAAGTAATAAATTAAAAATAGAAATGGGGGCGTCGCTATCGAGCC
TGACCGACAACGGAGAGAGCATGGGGCCGGGACTGGGAGACATACCGGAG
AGCTGCGTGGCGTGCGTGTTCATGTACTTGACGCCGCCGGAGATTTGCAA
TCTCGCCAGATTAAACCACGCTTTCCGCGGTGCGGCGTCGTCTGATTCCG
TGTGGGAAAACAAGCTCCCTTCTAACTATCAAGATCTGCTCGATTTGATG
CCTCCTGAACGCTACCTTAACTTGTCCAAAAAAGAAATTTTTGCCCTCCT
CTCCCGCCCGGTTCCCTTCGATGATGGCAATAAGGAAGTGTGGTTAGATA
GAGTGACGGGAAGAGTTTGCTTGTCAATATCAACAAAGGCTATGGCAATC
ACCGGAATTGAGGATCGCAGATATTGGAATTGGATTCCCACTGAAGAATC
AAGATTCCATGTGGTGGCGTATTTGCAACAAATATGGTGGTTCGAGGTGG
ATGGGGTAGTGAAGTTTCCACTTCCTGCTGATGTCTACACCGTGTCATTC
AGGCTTCATCTTGGAAAGATTGCCAAGAGATTGGGGCGACGAGTGTGTAA
CTTTGAACATACCCATGGTTGGGATATAAAGCCTGTACGGNTGGAGNTGT
CTACTTCAGATGGTCAGCAAGCATCATCTGAGTGCTATTTGGACAAGATG
GAAACAGATGACGCGAATGGCTACCATAAGCGGGGGTGTGGATAGATAAT
AGGGAAGTGAGTTTTGTGTCATGACTCGGAACCAGCACTGAAGTCCATTT
TCATGAAACGATAGATT
back to top