EY756484

Overview
NameEY756484
Unique NameEY756484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.044e-25
Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 2
Query:  128 IVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YLR  G   VP  CC G++SLN+AA+TTP RQ AC C+K AA  I  +N   A GLP  CGV+IPYKI+ S+DC+ V+
Sbjct:   41 INYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120          

HSP 2 Score: 45.8246 bits (107), Expect = 8.044e-25
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1
Query:   22 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            +LKL   +VLCM+V  PL+  A+T GQVT SLAPC
Sbjct:    6 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPC 40          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.044e-25
Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 2
Query:  128 IVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YLR  G   VP  CC G++SLN+AA+TTP RQ AC C+K AA  I  +N   A GLP  CGV+IPYKI+ S+DC+ V+
Sbjct:   37 INYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116          

HSP 2 Score: 45.8246 bits (107), Expect = 8.044e-25
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1
Query:   22 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            +LKL   +VLCM+V  PL+  A+T GQVT SLAPC
Sbjct:    2 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPC 36          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.047e-24
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            I YL+ GGP+   CC G+++LNAAA TTPDR+TACNCLK AA +I  +N   A GLP  CGV IPY I+ S++C+ V
Sbjct:   41 IGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116          

HSP 2 Score: 42.3578 bits (98), Expect = 1.047e-24
Identity = 19/43 (44.19%), Postives = 27/43 (62.79%), Query Frame = 1
Query:   19 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCNRLLEIG 147
            A +KL  A++LC++V  P +   ITCG V+  LAPC   L+ G
Sbjct:    5 AVIKLACAVLLCIVVAAPYAEAGITCGMVSSKLAPCIGYLKGG 47          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.774e-24
Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 2
Query:  134 YLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            YL +GGP+P  CCNGVR LN AA+TTPDRQTAC CLK    +   +N NNA  LP  CG+SI YKIT + DCSK+
Sbjct:   41 YLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115          

HSP 2 Score: 33.4982 bits (75), Expect = 1.774e-24
Identity = 17/43 (39.53%), Postives = 23/43 (53.49%), Query Frame = 1
Query:   25 LKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCNRLLEIGRP 153
            + ++   V CM+ +    A AI+CGQVT  L PC   L  G P
Sbjct:    6 MNVLCVAVACMVFSASY-ADAISCGQVTSGLVPCFGYLAAGGP 47          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.774e-24
Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I YL  G      CC GV+ L AAA TT DRQ ACNCLK AAG+I NLNP NA  LP  C V+IPYKI+ +++C+ ++
Sbjct:   40 IPYLTGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117          

HSP 2 Score: 43.5134 bits (101), Expect = 1.774e-24
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 1
Query:   40 ALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            ALV+CM+V  P++  A++CG VTG LAPC
Sbjct:   11 ALVMCMVVIAPMAEAAVSCGTVTGDLAPC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.261e-24
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+R GG +P  CCNG+R++N  ARTTPDR+TACNCLKQ +GSI  +NPNNA  LP  CGV+IPYKI+ S++C+ V+
Sbjct:   14 IGYVRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNPNNAAALPGKCGVNIPYKISASTNCATVK 91          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.954e-24
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+R GG +P  CCNG+R++N  ARTTPDRQ ACNCLKQ + S+P +NPNNA  LP  CGV IPYKI+ S++C+ V+
Sbjct:   14 IPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVHIPYKISASTNCATVK 91          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.092e-24
Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+  GG +P  CC GV  LN+ ARTTPDRQ AC CL+ AA ++ PNLN   A G+P+ACGVS+P+ I+ +++C+ V+
Sbjct:   40 IGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118          

HSP 2 Score: 39.2762 bits (90), Expect = 5.092e-24
Identity = 16/35 (45.71%), Postives = 26/35 (74.29%), Query Frame = 1
Query:   25 LKLVSALVLCMLVTGPLSA-QAITCGQVTGSLAPC 126
            +KL   ++ CM+V GP++A +A+TCG V  ++APC
Sbjct:    5 MKLACLVLACMIVAGPITANRALTCGTVNSNVAPC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 46/78 (58.97%), Postives = 61/78 (78.21%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+R GG +P  CCNG+R++N  ARTTPDRQ ACNCLKQ + S+P +NPNNA  LP  CGV+IPY+I+ S++C+ V+
Sbjct:   40 IPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVNIPYQISPSTNCANVK 117          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.476e-23
Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            I Y+  GG IP  CC+GV++LN+ A+TTPDRQ ACNC++ AA ++   LN   A G+P+ACGV+IPYKI+ S++C  VR
Sbjct:   40 IGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118          

HSP 2 Score: 35.8094 bits (81), Expect = 2.476e-23
Identity = 15/35 (42.86%), Postives = 24/35 (68.57%), Query Frame = 1
Query:   25 LKLVSALVLCMLVTGPLSAQ-AITCGQVTGSLAPC 126
            +KL   L+ CM+V GP+++  A++CG V  +LA C
Sbjct:    5 MKLACLLLACMIVAGPITSNAALSCGSVNSNLAAC 39          
The following BLAST results are available for this feature:
BLAST of EY756484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
NLTP2_GOSHI8.044e-2555.00Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP1_GOSHI8.044e-2555.00Non-specific lipid-transfer protein OS=Gossypium h... [more]
NLTP_SPIOL1.047e-2457.14Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLTP_GERHY1.774e-2461.33Non-specific lipid-transfer protein OS=Gerbera hyb... [more]
NLTP3_LENCU1.774e-2455.13Non-specific lipid-transfer protein 3 OS=Lens culi... [more]
NLTP1_PRUAR2.261e-2461.54Non-specific lipid-transfer protein 1 OS=Prunus ar... [more]
NLTP1_PRUPE2.954e-2460.26Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTPA_BRAOT5.092e-2451.90Non-specific lipid-transfer protein A OS=Brassica ... [more]
NLTP1_PRUDU6.580e-2458.97Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP1_ARATH2.476e-2354.43Non-specific lipid-transfer protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756484 ID=EY756484; Name=EY756484; organism=Citrus sinensis; type=EST; length=605bp
CCACGCGTCCGATAAATGGCTGCCCTCAAGCTTGTTTCAGCTTTGGTTCT
GTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAAGCCATAACATGTGGGC
AGGTGACTGGCTCATTGGCACCATGCAATCGTTTACTTGAGATCGGGCGG
CCCTATACCTGTGCCGTGCTGCAACGGCGTCAGGTCTCTCAACGCTGCCG
CCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAGCAAGCC
GCCGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTTCCACG
AGCTTGTGGAGTCAGCATTCCTTACAAGATCACCATCTCCAGTGACTGCT
CTAAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTTAAGTT
GACGGAGTACAATAAATGTATAATAATAAGGACATTTTTGTGTCCGAATT
ATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCCTCGTT
TCATGTTGTGTCTTATTGTCTTTGCTTTTCATGTCATCGTCAGTTTGTGT
CTATTCTGTTTATTACATGAAATCTTGCCTTGTGTTCAAAAAAAAAAAAA
AAAAA
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