EY756484

Overview
NameEY756484
Unique NameEY756484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3300 contig Csv1_Contig3300:217..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.376e-20
Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  134 YLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            YL + GP+   CC GV+ L   A+TT DRQ AC CLK AA S  +L+   A  LP  C V+IPYKI+ S+DCSKV+
Sbjct:   40 YLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114          

HSP 2 Score: 40.817 bits (94), Expect = 1.376e-20
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   28 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            K+   ++LCM+V  P  A+A+TCGQVT +LAPC
Sbjct:    6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPC 37          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 2
Query:  128 IVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            + YL +GGP P P CC GV+ L AAA TTPDRQ ACNC+K AA SI  LN NNA  LP  CGV+IPYKI+ S++C+ V+
Sbjct:   39 LTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.031e-20
Identity = 43/76 (56.58%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  134 YLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            Y R GG IP  CC GVR+LN  A+TTPDRQTACNCLK        LN     G+P  CGV+IPY I + +DC+KVR
Sbjct:   38 YARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113          

HSP 2 Score: 27.335 bits (59), Expect = 3.031e-20
Identity = 16/37 (43.24%), Postives = 19/37 (51.35%), Query Frame = 1
Query:   16 MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            MA    V  L+L   + G  +A AITCGQV   L  C
Sbjct:    1 MARSSAVCFLLLLAFLIG--TASAITCGQVDSDLTSC 35          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.031e-20
Identity = 45/76 (59.21%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  134 YLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            Y R  G  P   CC+GVRSLN+AARTT DR+ ACNCLK AA  I  LN   A  +P  CGVSIPY I+ S+DCS+V
Sbjct:   46 YARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121          

HSP 2 Score: 29.261 bits (64), Expect = 3.031e-20
Identity = 12/37 (32.43%), Postives = 20/37 (54.05%), Query Frame = 1
Query:   16 MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            +A    V A    +++    S  A+TCGQV+ ++ PC
Sbjct:    7 LAVAIAVVAAAAAVVLAATTSEAAVTCGQVSSAIGPC 43          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.912e-19
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 2
Query:  167 CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            CC+GVR+LN+AA TT DRQT C CLKQ   ++  L P+   G+P  CGV+IPY I+ S+DCS+V
Sbjct:   55 CCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118          

HSP 2 Score: 34.6538 bits (78), Expect = 1.912e-19
Identity = 15/33 (45.45%), Postives = 22/33 (66.67%), Query Frame = 1
Query:   28 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            K V+A+++  L+    +A A+TCGQV   LAPC
Sbjct:    8 KYVAAVMVVALLLAAPAASAVTCGQVVSMLAPC 40          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.487e-19
Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 2
Query:  134 YLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            YL  GG IP  CC+GV+ LN+ ARTT DRQ AC C++ AA ++   LN   A  LP AC V I Y I+  ++C+ VR
Sbjct:   42 YLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118          

HSP 2 Score: 43.5134 bits (101), Expect = 2.487e-19
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 1
Query:   25 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCNRLLEIG 147
            LKL + +++CMLVT P++++A I+CG VTGSL  C   L  G
Sbjct:    5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRG 46          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.861e-19
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 2
Query:  134 YLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            YLRS   +PVP  CCN VR LN AARTT D++TAC CLKQ A ++  LN N A GLP  CGV+IPYKI+ ++DC++V
Sbjct:   43 YLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.861e-19
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 2
Query:  134 YLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            YL  GG +P  CC GV++LN+ A+TTPDRQ AC C++  A SI  LNP+ A GLP  CGVSIPY I++S++C+ ++
Sbjct:   40 YLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            I YLRS GP+PV CCNGV++L  +A TT DR+TAC CL  A+ SI  +N   A GLP  CGV+IPYKI+ S++C +V
Sbjct:   14 INYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.568e-18
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 2
Query:  146 GGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            GGP P   CCNGVR L+  A+++ DRQT CNCLK  A  I NLN NNA  +P  C V++PY I+   DCS++
Sbjct:   45 GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116          

HSP 2 Score: 33.4982 bits (75), Expect = 1.568e-18
Identity = 14/36 (38.89%), Postives = 22/36 (61.11%), Query Frame = 1
Query:   19 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            A + L++A ++ ML   P +A A+ CGQV   + PC
Sbjct:    4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPC 39          
The following BLAST results are available for this feature:
BLAST of EY756484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
NLTP2_SOLCI1.376e-2052.63Non-specific lipid-transfer protein 2 OS=Solanum c... [more]
NLTP5_LENCU2.587e-2060.76Non-specific lipid-transfer protein 5 OS=Lens culi... [more]
SCA_LILLO3.031e-2056.58Stigma/stylar cysteine-rich adhesin OS=Lilium long... [more]
NLTP2_SORBI3.031e-2059.21Non-specific lipid-transfer protein 2 OS=Sorghum b... [more]
NLTP4_ORYSJ1.912e-1956.25Non-specific lipid-transfer protein 4 OS=Oryza sat... [more]
NLTP5_ARATH2.487e-1949.35Non-specific lipid-transfer protein 5 OS=Arabidops... [more]
NLTP_DAUCA2.861e-1959.74Non-specific lipid-transfer protein OS=Daucus caro... [more]
NLTP3_ARATH2.861e-1953.95Non-specific lipid-transfer protein 3 OS=Arabidops... [more]
NLTP5_VITSX8.323e-1957.14Non-specific lipid-transfer protein P5 OS=Vitis sp... [more]
NLTP1_HORVU1.568e-1852.78Non-specific lipid-transfer protein 1 OS=Hordeum v... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756484 ID=EY756484; Name=EY756484; organism=Citrus sinensis; type=EST; length=605bp
CCACGCGTCCGATAAATGGCTGCCCTCAAGCTTGTTTCAGCTTTGGTTCT
GTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAAGCCATAACATGTGGGC
AGGTGACTGGCTCATTGGCACCATGCAATCGTTTACTTGAGATCGGGCGG
CCCTATACCTGTGCCGTGCTGCAACGGCGTCAGGTCTCTCAACGCTGCCG
CCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAGCAAGCC
GCCGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTTCCACG
AGCTTGTGGAGTCAGCATTCCTTACAAGATCACCATCTCCAGTGACTGCT
CTAAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTTAAGTT
GACGGAGTACAATAAATGTATAATAATAAGGACATTTTTGTGTCCGAATT
ATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCCTCGTT
TCATGTTGTGTCTTATTGTCTTTGCTTTTCATGTCATCGTCAGTTTGTGT
CTATTCTGTTTATTACATGAAATCTTGCCTTGTGTTCAAAAAAAAAAAAA
AAAAA
back to top