EY756484

Overview
NameEY756484
Unique NameEY756484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3300 contig Csv1_Contig3300:217..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-17
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 2
Query:  146 GGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            GGP P   CC+GV++L+  AR+  DRQ+ACNCLK  A  I NLN +NA  +P  CGV++PY I+++ DCS+V
Sbjct:   42 GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113          

HSP 2 Score: 28.4906 bits (62), Expect = 3.672e-17
Identity = 13/36 (36.11%), Postives = 20/36 (55.56%), Query Frame = 1
Query:   19 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            A + L++  ++ ML   P +A AI CG V   + PC
Sbjct:    1 AQVMLMAVALVLMLAAVPRAAVAIDCGHVDSLVRPC 36          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.672e-17
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  167 CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            CC+GVR+LN  A ++ DR+TAC+CLK  A S  NLN  NA  +P  CGVS+ + I+ S DCSK+
Sbjct:   57 CCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          

HSP 2 Score: 30.8018 bits (68), Expect = 3.672e-17
Identity = 16/39 (41.03%), Postives = 24/39 (61.54%), Query Frame = 1
Query:   10 R*MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            R MA + LV+  V+   V    ++ A++CG VT S+APC
Sbjct:    6 RTMALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPC 42          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.672e-17
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  167 CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            CC+GVR+LN  A ++ DR+TAC+CLK  A S  NLN  NA  +P  CGVS+ + I+ S DCSK+
Sbjct:   57 CCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          

HSP 2 Score: 30.8018 bits (68), Expect = 3.672e-17
Identity = 16/39 (41.03%), Postives = 24/39 (61.54%), Query Frame = 1
Query:   10 R*MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            R MA + LV+  V+   V    ++ A++CG VT S+APC
Sbjct:    6 RTMALVALVA--VVAAAVVAERASAAVSCGDVTSSIAPC 42          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.775e-17
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 2
Query:  128 IVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            I Y R +G   PV CC+GV+ L  AA++T D+Q AC CLK  A SI  +N     G+P  CGVS+P+ I++S+DC+KV
Sbjct:   40 ISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117          

HSP 2 Score: 28.4906 bits (62), Expect = 4.775e-17
Identity = 17/37 (45.95%), Postives = 25/37 (67.57%), Query Frame = 1
Query:   19 AALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            AA +LV  A+V  ML+    +  AI+CGQV+ +L+PC
Sbjct:    5 AATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.002e-16
Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  128 IVYLRSGGPIPVPCC-NGVRSLNAAARTTPDRQTACNC-LKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            + Y R  G  P   C +GVRSLNAAARTT DR+ ACNC LK AA  +  LN   A  +P  CGV +PY I+ S DCS+V
Sbjct:   15 LAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93          

HSP 2 Score: 25.0238 bits (53), Expect = 3.002e-16
Identity = 8/14 (57.14%), Postives = 12/14 (85.71%), Query Frame = 1
Query:   85 AITCGQVTGSLAPC 126
            AI+CGQV+ ++ PC
Sbjct:    1 AISCGQVSSAIGPC 14          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.450e-15
Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 2
Query:  134 YLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            Y +  G  P   CC+GV+ L   AR+T D+Q  C CLK  AG+    N   A G+P  CGVS+PY I+ S DCSK+
Sbjct:   42 YAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGA---YNAGRAAGIPSRCGVSVPYTISASVDCSKI 114          

HSP 2 Score: 30.8018 bits (68), Expect = 1.450e-15
Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 1
Query:   19 AALKL-VSALVLCMLVTGPLSAQAITCGQVTGSLAPC 126
            AA KL + ALV  ML+    +  AITCGQV+ +L PC
Sbjct:    5 AATKLALVALVAAMLLVA--ADAAITCGQVSSALGPC 39          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.863e-15
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 2
Query:  134 YLRSGG-PIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKITI 337
            YL +GG   P P CCNGVR LN    TT DR+ AC C+K AA ++ P LN + A G+PR CG+ IPY   I
Sbjct:   42 YLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQI 112          

HSP 2 Score: 31.5722 bits (70), Expect = 1.863e-15
Identity = 17/46 (36.96%), Postives = 27/46 (58.70%), Query Frame = 1
Query:   16 MAALKLVSALVLCMLVT-GPLSAQA-ITCGQVTGSLAPCNRLLEIG 147
            MA L  +  LV   ++  GP++A+A ++CG+V  +L PC   L  G
Sbjct:    1 MAGLMKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNG 46          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.523e-15
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 2
Query:  107 LAHWHHAIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNP---NNAVGLPRACGVSIPYKITISSDCSKVR 361
            +A  +  + Y+  GGP+P  CCNG+ +L + A+T+ DRQ  C C+K A G +  L+P    NA+ LP  CGV +PYK + S+DC  ++
Sbjct:   27 IADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGL-TLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 2
Query:  134 YLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKV 358
            YL++GG     CCNG+ SL AAA    DRQ ACNCLK  A +IP +N + A  LP  CGV+I    + + DC+ +
Sbjct:   44 YLKAGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118          
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.825e-13
Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 2
Query:  110 AHWHHAIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAG--SIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            A+ +  +VY+  GG IP  CCNG+R L+  A +  D+Q  C C+K   G  S  ++    A  LP  CGV +PYKI  S++C+ ++
Sbjct:   31 ANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116          
The following BLAST results are available for this feature:
BLAST of EY756484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
NLTP1_WHEAT3.672e-1752.78Non-specific lipid-transfer protein (Fragment) OS=... [more]
NLTP3_ORYSJ3.672e-1753.13Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTP3_ORYSI3.672e-1753.13Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTP3_HORVU4.775e-1748.72Non-specific lipid-transfer protein 3 OS=Hordeum v... [more]
NLTP_ELECO3.002e-1653.16Non-specific lipid-transfer protein OS=Eleusine co... [more]
NLTP8_HORVU1.450e-1546.05Non-specific lipid-transfer protein Cw18 OS=Hordeu... [more]
NLTP7_ARATH1.863e-1552.11Non-specific lipid-transfer protein 7 OS=Arabidops... [more]
NLTP6_ARATH9.523e-1540.91Non-specific lipid-transfer protein 6 OS=Arabidops... [more]
NLTPB_ARATH5.226e-1346.67Non-specific lipid-transfer protein 11 OS=Arabidop... [more]
NLTPA_ARATH6.825e-1338.37Non-specific lipid-transfer protein 10 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756484 ID=EY756484; Name=EY756484; organism=Citrus sinensis; type=EST; length=605bp
CCACGCGTCCGATAAATGGCTGCCCTCAAGCTTGTTTCAGCTTTGGTTCT
GTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAAGCCATAACATGTGGGC
AGGTGACTGGCTCATTGGCACCATGCAATCGTTTACTTGAGATCGGGCGG
CCCTATACCTGTGCCGTGCTGCAACGGCGTCAGGTCTCTCAACGCTGCCG
CCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAGCAAGCC
GCCGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTTCCACG
AGCTTGTGGAGTCAGCATTCCTTACAAGATCACCATCTCCAGTGACTGCT
CTAAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTTAAGTT
GACGGAGTACAATAAATGTATAATAATAAGGACATTTTTGTGTCCGAATT
ATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCCTCGTT
TCATGTTGTGTCTTATTGTCTTTGCTTTTCATGTCATCGTCAGTTTGTGT
CTATTCTGTTTATTACATGAAATCTTGCCTTGTGTTCAAAAAAAAAAAAA
AAAAA
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