EY756484

Overview
NameEY756484
Unique NameEY756484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.897e-12
Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 2 
Query:  128 IVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            + YL+  G  P P  CC GVRSL AAA+T  DR+ ACNC+K AA    +LN   A  L   CGV + Y ++ + +C+ V+
Sbjct:   15 MTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94

HSP 2 Score: 22.3274 bits (46), Expect = 4.897e-12
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 1 
Query:   85 AITCGQVTGSLAPCNRLLE 141
            A+TC  VT +L PC   L+
Sbjct:    1 AVTCTVVTKALGPCMTYLK 19
[Close]
BLAST of EY756484 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.897e-12
Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = 2 
Query:  128 IVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKITISSDCSKVR 361
            + YL+  G  P P  CC GVRSL AAA+T  DR+ ACNC+K AA    +LN   A  L   CGV + Y ++ + +C+ V+
Sbjct:   15 MTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94

HSP 2 Score: 22.3274 bits (46), Expect = 4.897e-12
Identity = 9/19 (47.37%), Postives = 12/19 (63.16%), Query Frame = 1 
Query:   85 AITCGQVTGSLAPCNRLLE 141
            A+TC  VT +L PC   L+
Sbjct:    1 AVTCTVVTKALGPCMTYLK 19
The following BLAST results are available for this feature:
BLAST of EY756484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
NLTP_AMACA4.897e-1243.75Non-specific lipid-transfer protein OS=Amaranthus ... [more]
NLTP1_AMAHP4.897e-1243.75Non-specific lipid-transfer protein 1 OS=Amaranthu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756484 ID=EY756484; Name=EY756484; organism=Citrus sinensis; type=EST; length=605bp
CCACGCGTCCGATAAATGGCTGCCCTCAAGCTTGTTTCAGCTTTGGTTCT
GTGCATGTTGGTGACTGGTCCCCTGAGTGCTCAAGCCATAACATGTGGGC
AGGTGACTGGCTCATTGGCACCATGCAATCGTTTACTTGAGATCGGGCGG
CCCTATACCTGTGCCGTGCTGCAACGGCGTCAGGTCTCTCAACGCTGCCG
CCAGAACCACACCTGACCGCCAAACTGCATGCAACTGCTTGAAGCAAGCC
GCCGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTTCCACG
AGCTTGTGGAGTCAGCATTCCTTACAAGATCACCATCTCCAGTGACTGCT
CTAAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTTAAGTT
GACGGAGTACAATAAATGTATAATAATAAGGACATTTTTGTGTCCGAATT
ATGAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCCTCGTT
TCATGTTGTGTCTTATTGTCTTTGCTTTTCATGTCATCGTCAGTTTGTGT
CTATTCTGTTTATTACATGAAATCTTGCCTTGTGTTCAAAAAAAAAAAAA
AAAAA
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