EY756474

Overview
NameEY756474
Unique NameEY756474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 85/239 (35.56%), Postives = 131/239 (54.81%), Query Frame = 2
Query:   71 LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGADREV-QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDF 745
            + +++GI+  +G+LLYGPPGTGKT++A+ +     A   ++V G E + KY+G+    VR +F  A+        E+   II  DE+DAI   R    +G D  V  +++ +LL +MDG DQ  N+ VI  TNR D +D ALLRPGRL+  +E  LPD   +  + ++ T++M     L ++VD+E+  S     S AEIA + + A   A  ++  V     +  G   N+K    DF
Sbjct:  295 MVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAV-SGNLENIKVNRNDF 530          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS2_METJA (Putative 26S protease regulatory subunit homolog MJ1494 OS=Methanocaldococcus jannaschii GN=MJ1494 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.699e-29
Identity = 70/215 (32.56%), Postives = 125/215 (58.14%), Query Frame = 2
Query:   17 IQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR-FDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMH 658
            I ++E ++   + + + E  K  G   P+ VL YGPPGTGKT++A+A+A  T ++FI V   E + +++G+  +M+R++++ A E+AP I+FIDE+DAI  +R + +  G   +V  ++  LL ++DG  +   V  I ATN    LDPA+    R + +IEF LP+  ++  + ++   KM L  + +L+++V +    S  +I     +  +H
Sbjct:  127 IGQEEAKKKCRIIMKYLENPKLFGEWAPKNVLFYGPPGTGKTLMARALATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAIGLSREYQSLRG---DVSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALH 336          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 80/225 (35.56%), Postives = 127/225 (56.44%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKM-NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            A  D+ KQ ++E V LP    EL+  +   P RG+LL+GPPG GKTMLAKAVA  + A F  +  +    KY+GEG ++VR +F +A+E  P+IIFIDEVD++   R + +  A R   R+  E L + DG     + +V++  ATNR   LD A+LR  R  +++   LP+   + ++ +   +K  N   E +L       +  S ++I A+ ++A +  +R+
Sbjct:  329 AGQDLAKQALQEIVILPSIRPELFTGLRA-PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRE 547          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_ANOGA (Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 80/227 (35.24%), Postives = 126/227 (55.51%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF---DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN--LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            A  ++ KQ ++E V LP    EL+  +   P +G+LL+GPPG GKT+LA+AVA   +A F  +  +    KY+G+G ++VR +F +A+E  P+IIFIDEVD++ + R   +  A R   R+  E L Q DG     +   + V+ ATNR   LD A LR  R  +++   LPDR  + L+ +    K    LSD  DL       +  S +++ A+ ++A +  +R+
Sbjct:  506 AGQEVAKQALQEMVILPSVRPELFTGLRT-PAKGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSSNEHEATR---RLKTEFLVQFDGLPANSEADRIVVMAATNRPQELDEAALR--RFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSD-ADLAHLAQLTEGYSGSDLTALARDAALEPIRE 725          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 75/221 (33.94%), Postives = 128/221 (57.92%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 667
            +  K  I+E V  P+   +++  +   PP+G+LL+GPPGTGKT++ K +A  + A F  +  S    K++GEG +MVR +F +A+ + PA+IFIDE+D++ + R + +  + R   RI  E L Q+DG   + +  + V+ ATNR   +D A  R  RL +++  PLP+   ++ +     AK + S  E ++E  V + D  S A++  +C+EA +  +R
Sbjct:  389 EFAKTTIKEIVVWPMLRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSR---RIKTEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQEVEAIVLQADGFSGADMTQLCREAALGPIR 603          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 83/219 (37.90%), Postives = 127/219 (57.99%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV-CTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            K+ ++EAV LP+    L+      P RG+LL+GPPGTGK+ LAKAVA     + F  +  S+ V K+LGE  ++V+++F+LA+EN P+IIFIDE+D++  +R + ++ A R   RI  E L QM G       + V+ ATN    LD A+ R  R +++I  PLP+   +  +F++      N   E D  +   + D  S A+I+ I ++A M  VRK
Sbjct:  143 KEALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAAR---RIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 79/225 (35.11%), Postives = 125/225 (55.56%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            A  D+ KQ ++E V LP    EL+  +   P RG+LL+GPPG GKTMLAKAVA  + A F  +  +    KY+GEG ++VR +F +A+E  P+IIFIDEVD++   R + +  A R   R+  E L + DG     + +V++  ATNR   LD A+LR  R  +++   LP+   + L+ +    K      + +L       D  S +++ A+ ++A +  +R+
Sbjct:  345 AGQDLAKQALQEIVILPSLRPELFTGLRA-PARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRE 563          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.310e-29
Identity = 77/225 (34.22%), Postives = 128/225 (56.89%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTV--NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN--LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 667
            A  +  K  I+E V  P+   +++  +   PP+G+LL+GPPGTGKT++ K +A+ + A F  +  S    K++GEG +MVR +F +A+   PA+IFIDE+D++ + R D +  + R   RI  E L Q+DG   +    + V+ ATNR   +D A  R  RL +++  PLP+   ++ +     +K    LSDE + +  V + D  S A++  +C+EA +  +R
Sbjct:  413 AGVEFAKATIKEIVVWPMMRPDIFTGLR-GPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSR---RIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDE-ETDLVVQQSDGFSGADMTQLCREASLGPIR 630          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 8.241e-29
Identity = 77/214 (35.98%), Postives = 119/214 (55.61%), Query Frame = 2
Query:   68 ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKE--------NAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            E  +Q+G+   RG+LL+GPPGTGKT++A+ +     A   ++V G + + KY+GE    VR +F  A+E        +   II  DE+DAI   R  +  G+      ++ +LL++MDG +Q  N+ VI  TNR D +D ALLRPGRL+ ++E  LPD   +  + ++ TA+M     +   VDLED   R    S AE+  + + A   A+ +
Sbjct:  320 EFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQR-GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNR 532          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.076e-28
Identity = 83/219 (37.90%), Postives = 127/219 (57.99%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQV-CTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            K+ ++EAV LP+    L+      P RG+LL+GPPGTGK+ LAKAVA     + F  +  S+ V K+LGE  ++V+++F+LA+EN P+IIFIDE+D++  +R + ++ A R   RI  E L QM G       + V+ ATN    LD A+ R  R +++I  PLP+   +  +F++      N   E D  +   + D  S A+I+ I ++A M  VRK
Sbjct:  143 KEALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAAR---RIKTEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355          
The following BLAST results are available for this feature:
BLAST of EY756474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
SEC18_SCHPO3.699e-2935.56Vesicular-fusion protein sec18 OS=Schizosaccharomy... [more]
PRS2_METJA3.699e-2932.56Putative 26S protease regulatory subunit homolog M... [more]
SPAST_XENLA4.832e-2935.56Spastin OS=Xenopus laevis GN=spast PE=2 SV=1[more]
SPAST_ANOGA4.832e-2935.24Spastin OS=Anopheles gambiae GN=spas PE=3 SV=5[more]
FIGL1_XENTR4.832e-2933.94Fidgetin-like protein 1 OS=Xenopus tropicalis GN=f... [more]
VPS4B_HUMAN6.310e-2937.90Vacuolar protein sorting-associated protein 4B OS=... [more]
SPAST_HUMAN6.310e-2935.11Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1[more]
FIGL1_MOUSE6.310e-2934.22Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 ... [more]
NSF_CAEEL8.241e-2935.98Vesicle-fusing ATPase OS=Caenorhabditis elegans GN... [more]
VPS4B_PONAB1.076e-2837.90Vacuolar protein sorting-associated protein 4B OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756474 ID=EY756474; Name=EY756474; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGGTGATATTCAAAAGCAGGAAATTCGTGAGGCTGTGGAGT
TACCGCTGACTCACCATGAGCTATACAAGCAAATTGGTATAGATCCTCCA
CGTGGTGTTTTACTTTATGGTCCTCCTGGAACTGGTAAAACTATGCTTGC
AAAGGCTGTTGCCAATCATACAACTGCAGCATTCATTAGAGTTGTTGGCT
CTGAGTTTGTTCAGAAGTACCTGGGTGAGGGTCCACGAATGGTTCGGGAT
GTTTTTCGTCTTGCTAAAGAGAATGCCCCAGCTATTATTTTTATTGATGA
GGTAGATGCTATAGCTACAGCTAGGTTTGATGCTCAAACTGGAGCTGATA
GAGAAGTTCAACGAATCCTTATGGAACTCCTCAATCAGATGGACGGATTT
GATCAGACTGTAAATGTTAAGGTCATCATGGCAACAAATCGGGCTGACAC
ATTGGACCCTGCACTTCTCCGTCCTGGAAGGCTTGACCGAAAAATTGAAT
TTCCTTTGCCTGATAGACGACAAAAGAGGCTCGTTTTTCAGGTTTGCACG
GCAAAGATGAACTTAAGCGATGAGGTAGACTTGGAGGATTATGTTTCCCG
TCCAGATAAAATCAGTGCTGCTGAGATTGCAGCCATCTGCCAAGAGGCAG
GAATGCATGCTGTGCGCAAGAACAGGTATGTCATACTCCCCAANNGACTT
TGAAAGGGTTATCGGACCAATGTGAAGAAGCCCGACACCGACTTCGAATT
TTTACAGTGAAGAGGGCTAGAAGAAGTTATGAAGATCACTTTGATAATGG
TNGNCAAATGTCTCTCTCACTATGAAAATTGNTGCCCCATGTCATGCATC
GCCACACTTGGGATATGCTTTATAGACTCATTGGCATATAATCCAGCTTT
AGTAGAGTAGCGTAAAATCGAAATCT
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