EY756474

Overview
NameEY756474
Unique NameEY756474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: FIGL1_DROME (Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.463e-27
Identity = 79/219 (36.07%), Postives = 121/219 (55.25%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG--FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR--RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 667
            K    EA+ +PL   +L+  +   PPRGVLL+GPPGTGKT++AK++A+   A F  +  S    K++G+  ++V+ +F +A  + PAIIFIDEVD++ + R       +    R+  E L  +DG   ++ + V VI ATNR   LD A+ R  R  R++  PLP R  RQK +   +   K NL D   + +     D  S A++  +C+ A M  +R
Sbjct:  259 KSTFLEAIIMPLRRPDLFTGVRC-PPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAHQPAIIFIDEVDSLLSKR---SANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTREARQKIIEKLIHQVKHNL-DVRQVIELAELTDGYSGADVDTLCRYASMAPLR 470          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.522e-27
Identity = 71/223 (31.84%), Postives = 121/223 (54.26%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            A  D+ KQ ++E V LP    EL+  +   P +G+LL+GPPG GKT+LA+AVA   +A F+ +  +    KY+G+G ++VR +F +A+   P+IIFIDEVD++ + R   +  A R ++   +   + + G  +   + V+ ATNR   LD A LR  R  +++   LP+ + + L+      K     D   L       D  S +++ A+ ++A +  +R+
Sbjct:  493 AGQDVAKQALQEMVILPSVRPELFTGLRA-PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRE 712          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.522e-27
Identity = 70/223 (31.39%), Postives = 123/223 (55.16%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSR-PDKISAAEIAAICQEAGMHAVRK 670
            A  D+ KQ ++E V LP    EL+  +   P +G+LL+GPPG GKT+LA+AVA   +A F+ +  +    KY+G+G ++VR +F +A+   P+IIFIDEVD++ + R   +  A R ++   +   + + G      + V+ ATNR   LD A LR  R  +++   LPD + + L+      K     + D    +++  +  S +++ A+ ++A +  +R+
Sbjct:  510 AGQDVAKQALQEMVILPSVRPELFTGLRA-PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIRE 729          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.522e-27
Identity = 73/234 (31.20%), Postives = 129/234 (55.13%), Query Frame = 2
Query:   14 DIQKQEI-REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAK--------ENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 673
            D + Q+I R A    +   EL +++     +G+LLYGPPGTGKT++A+ ++        ++V G E + KY+G     +R++F+ A+        ++   +I  DE+D++   R   ++        ++ +LL++MDG DQ  N+ VI  TNR D +D ALLRPGR + +IE  LPD + ++ +F + T K+     LS +V+ ++  +     + AEI  +C  A  +A+ ++
Sbjct:  281 DAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAISRH 514          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 75/222 (33.78%), Postives = 123/222 (55.41%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ-VCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            D  KQ + E+V LP    +++  +   PP+G+LL+GPPG GKTM+AKAVA  +   F  +  S    KY+G+G ++VR +F +A    P+IIFIDE+D++ T R   ++ A R   R+  E+L Q DG     + +V++  ATNR + LD A LR  RL ++I   LP+   +  + Q +   + +   +  +          S  ++AA+C++A    +R+
Sbjct:  390 DKVKQSLMESVILPNLRPDVFTGLRA-PPKGLLLFGPPGNGKTMIAKAVAYESKVTFFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSIIFIDEIDSLLTERSSNESEASR---RLKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALR--RLVKRIYVGLPELETRLQIIQHLLVGQRHSLTKQQINSLAEVTQGYSGFDLAALCKDAAYEPIRR 605          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 72/217 (33.18%), Postives = 119/217 (54.84%), Query Frame = 2
Query:   29 EIREAVELPLTHHELYKQIGI-DPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRIL-MELLNQMDGFDQTVNVKVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 667
            E+++ V LP+    L++   +  PP+GVLLYGPPG GKT++AKA A      FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R    + +D E   ++  + ++  DG D   N +VI+  ATNR   LD A+LR  R+  +     P+ RQ++ + ++     N+   V+L +   + D  S +++  +C++A +  VR
Sbjct:  106 ELKDTVILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVR 316          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.714e-27
Identity = 71/223 (31.84%), Postives = 120/223 (53.81%), Query Frame = 2
Query:    5 ASGDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLS-DEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            A  D+ KQ ++E V LP    EL+  +   P +G+LL+GPPG GKT+LA+AVA   +A F+ +  +    KY+G+G ++VR +F +A+   P+IIFIDEVD++ + R   +  A R ++   +   + + G  +   + V+ ATNR   LD A LR  R  +++   LP  + + L+      K     D   L       D  S +++ A+ ++A +  +R+
Sbjct:  497 AGQDVAKQALQEMVILPSVRPELFTGLRA-PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPGVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRE 716          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: SPAST_CAEBR (Probable spastin homolog spas-1 OS=Caenorhabditis briggsae GN=spas-1 PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.714e-27
Identity = 76/221 (34.39%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV---DLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            K  + EAV LP  +  L+  +   P +G+LL+GPPG GKT+LAKAVA  +   F  +  S    K++G+  + +R +F++A+   P+IIFIDE+D+I   R +      R   R+  E L Q DG   + +  + VI ATNR   LD A+LR  R  ++I   LPD   ++ +      K ++ D +   D+    S     S +++ A+C+EA M  VR+
Sbjct:  278 KATLEEAVILPALNPNLFSGLR-QPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNGQPSIIFIDEIDSILCERSEKDAEVSR---RMKTEFLVQFDGATSSPDDRILVIGATNRPYELDDAVLR--RFPKRIMLNLPDTEARKELITNTLKKHDMMDGLSSSDIRYIASNTSGFSNSDLVALCKEAAMVPVRE 492          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 71/210 (33.81%), Postives = 118/210 (56.19%), Query Frame = 2
Query:   80 QIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENAPA--------IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            ++GI   +G+LL+GPPGTGKT++A+ +         ++V G E + K++GE  + VRD+F  A+++           +I  DE+DAI  +R   + G       I+ +LL ++DG +   NV +I  TNR D LD ALLRPGRL+ ++E  LPD   +  + Q+ T KM     L  +++L++  +R    S AE+  + + A  +A+ +
Sbjct:  244 RLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNR 452          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 81/230 (35.22%), Postives = 126/230 (54.78%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREV-QRILMELLNQMDGFDQTV---------NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ--VCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 667
            +  K  ++EAV  P    +L++ +  +P RG+LL+GPPGTGKTMLA+AVA  + + F  +  S    K+LGE  ++VR +F LAK+ +P+IIF+DE+D++ +AR  +  G + E  +RI  E L Q     +            V V+ ATN    +D A  R  R  R+   PLPD   +RL     +   K +LS E D+E  V   +  S +++ A+ ++A M  +R
Sbjct:  465 EFAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLE-DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688          
The following BLAST results are available for this feature:
BLAST of EY756474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
FIGL1_DROME3.463e-2736.07Fidgetin-like protein 1 OS=Drosophila melanogaster... [more]
SPAST_DROMO4.522e-2731.84Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1[more]
SPAST_DROGR4.522e-2731.39Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1[more]
SEC18_CANAL4.522e-2731.20Vesicular-fusion protein SEC18 OS=Candida albicans... [more]
SPAST_DICDI5.906e-2733.78Spastin OS=Dictyostelium discoideum GN=DDB_G028716... [more]
ATD1B_DANRE5.906e-2733.18ATPase family AAA domain-containing protein 1-B OS... [more]
SPAST_DROVI7.714e-2731.84Spastin OS=Drosophila virilis GN=spas PE=3 SV=1[more]
SPAST_CAEBR7.714e-2734.39Probable spastin homolog spas-1 OS=Caenorhabditis ... [more]
NSF_ARATH1.316e-2633.81Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=N... [more]
YKX4_SCHPO1.718e-2635.22Uncharacterized AAA domain-containing protein C328... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756474 ID=EY756474; Name=EY756474; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGGTGATATTCAAAAGCAGGAAATTCGTGAGGCTGTGGAGT
TACCGCTGACTCACCATGAGCTATACAAGCAAATTGGTATAGATCCTCCA
CGTGGTGTTTTACTTTATGGTCCTCCTGGAACTGGTAAAACTATGCTTGC
AAAGGCTGTTGCCAATCATACAACTGCAGCATTCATTAGAGTTGTTGGCT
CTGAGTTTGTTCAGAAGTACCTGGGTGAGGGTCCACGAATGGTTCGGGAT
GTTTTTCGTCTTGCTAAAGAGAATGCCCCAGCTATTATTTTTATTGATGA
GGTAGATGCTATAGCTACAGCTAGGTTTGATGCTCAAACTGGAGCTGATA
GAGAAGTTCAACGAATCCTTATGGAACTCCTCAATCAGATGGACGGATTT
GATCAGACTGTAAATGTTAAGGTCATCATGGCAACAAATCGGGCTGACAC
ATTGGACCCTGCACTTCTCCGTCCTGGAAGGCTTGACCGAAAAATTGAAT
TTCCTTTGCCTGATAGACGACAAAAGAGGCTCGTTTTTCAGGTTTGCACG
GCAAAGATGAACTTAAGCGATGAGGTAGACTTGGAGGATTATGTTTCCCG
TCCAGATAAAATCAGTGCTGCTGAGATTGCAGCCATCTGCCAAGAGGCAG
GAATGCATGCTGTGCGCAAGAACAGGTATGTCATACTCCCCAANNGACTT
TGAAAGGGTTATCGGACCAATGTGAAGAAGCCCGACACCGACTTCGAATT
TTTACAGTGAAGAGGGCTAGAAGAAGTTATGAAGATCACTTTGATAATGG
TNGNCAAATGTCTCTCTCACTATGAAAATTGNTGCCCCATGTCATGCATC
GCCACACTTGGGATATGCTTTATAGACTCATTGGCATATAATCCAGCTTT
AGTAGAGTAGCGTAAAATCGAAATCT
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