EY756474

Overview
NameEY756474
Unique NameEY756474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: NSF1_DROME (Vesicle-fusing ATPase 1 OS=Drosophila melanogaster GN=comt PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 73/214 (34.11%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   68 ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            EL +Q+G    +G+LLYGPPGTGKT++A+ +     A   ++V G + + KY+GE    VR +F        RL   +   II  DE+DAI   R  +  G       ++ +LL ++DG DQ  N+ VI  TNR D +D ALLRPGRL+ ++E  LP+ + +  +  + T +M     ++D+VD ++  +     S AE+  + + A   A+ +
Sbjct:  243 ELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQR-GSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNR 455          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 72/217 (33.18%), Postives = 119/217 (54.84%), Query Frame = 2
Query:   29 EIREAVELPLTHHELYKQIGI-DPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRIL-MELLNQMDGFDQTVN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 667
            E+++ V LP     L+    +  PP+GVLLYGPPG GKT++AKA A  +   FI +  S    K+ GE  ++   VF LA +  P IIF+DE+D+    R    +  D E   ++  + ++  DG D   N  V V+ ATNR   +D A+LR  R+       LP+  Q+  + ++  +  NLS+ ++L++  S+ +  S +++  +C++A M+ VR
Sbjct:  105 EMQDTVILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNR----SSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVR 315          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 80/220 (36.36%), Postives = 130/220 (59.09%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ--VCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            K+ ++EAV LP+    L+      P RG+LL+GPPGTGK+ LAKAVA     + F  V  S+ + K+LGE  ++V+++F LA+++ P+IIFIDEVD++  +R + ++ A R   RI  E L QM G  +      V+ ATN    LD A+ R  R +++I  PLP+   +  +F+  + +   NL+D  ++ +   + +  S A+I+ I +++ M  VRK
Sbjct:  136 KEALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR---RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 80/220 (36.36%), Postives = 130/220 (59.09%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ--VCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            K+ ++EAV LP+    L+      P RG+LL+GPPGTGK+ LAKAVA     + F  V  S+ + K+LGE  ++V+++F LA+++ P+IIFIDEVD++  +R + ++ A R   RI  E L QM G  +      V+ ATN    LD A+ R  R +++I  PLP+   +  +F+  + +   NL+D  ++ +   + +  S A+I+ I +++ M  VRK
Sbjct:  136 KEALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR---RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 80/220 (36.36%), Postives = 130/220 (59.09%), Query Frame = 2
Query:   23 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF-DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ--VCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            K+ ++EAV LP+    L+      P RG+LL+GPPGTGK+ LAKAVA     + F  V  S+ + K+LGE  ++V+++F LA+++ P+IIFIDEVD++  +R + ++ A R   RI  E L QM G  +      V+ ATN    LD A+ R  R +++I  PLP+   +  +F+  + +   NL+D  ++ +   + +  S A+I+ I +++ M  VRK
Sbjct:  136 KEALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAAR---RIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTD-ANIHELARKTEGYSGADISIIVRDSLMQPVRK 348          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: NSF2_DROME (Vesicle-fusing ATPase 2 OS=Drosophila melanogaster GN=Nsf2 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 72/214 (33.64%), Postives = 118/214 (55.14%), Query Frame = 2
Query:   68 ELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVF--------RLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            EL +Q+GI   +G+LLYGPPGTGKT++A+ +     A   ++V G + + KY+GE    +R +F        RL   +   II  DE+DAI  AR  +  G       ++ +LL ++DG +Q  N+ VI  TNR D +D ALLRPGRL+ ++E  LP+ + +  +  + T +M     ++ +VD  +  ++    S AE+  + + A   A+ +
Sbjct:  248 ELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKAR-GSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMNR 460          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.530e-26
Identity = 69/215 (32.09%), Postives = 114/215 (53.02%), Query Frame = 2
Query:   29 EIREAVELPLTHHELYKQIGI-DPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            ++++ V LP+    L++   +  PP+GVLLYGPPG GKT++AKA A      FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R  +   A   ++   M L + +D  D +  V V+ ATNR   LD A++R  R+  +     P  +Q+  + ++     N+   VDL +     D  S +++  +C++A +  VR+
Sbjct:  102 DLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.530e-26
Identity = 69/215 (32.09%), Postives = 114/215 (53.02%), Query Frame = 2
Query:   29 EIREAVELPLTHHELYKQIGI-DPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            ++++ V LP+    L++   +  PP+GVLLYGPPG GKT++AKA A      FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R  +   A   ++   M L + +D  D +  V V+ ATNR   LD A++R  R+  +     P  +Q+  + ++     N+   VDL +     D  S +++  +C++A +  VR+
Sbjct:  102 DLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.530e-26
Identity = 69/215 (32.09%), Postives = 114/215 (53.02%), Query Frame = 2
Query:   29 EIREAVELPLTHHELYKQIGI-DPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            ++++ V LP+    L++   +  PP+GVLLYGPPG GKT++AKA A      FI +  S    K+ GE  ++   VF LA +  P+IIFIDE+D+    R  +   A   ++   M L + +D  D +  V V+ ATNR   LD A++R  R+  +     P  +Q+  + ++     N+   VDL +     D  S +++  +C++A +  VR+
Sbjct:  102 DLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGLD-TDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVRE 313          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.114e-25
Identity = 78/217 (35.94%), Postives = 112/217 (51.61%), Query Frame = 2
Query:   29 EIREAVELPLTHHELYKQIGI-DPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRIL-MELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL-SDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            ++ E+V  PL   E+Y    +   P GVLLYGPPG GKTMLAKA+A  + A FI +  S  + K+ GE  ++V  +F LA +  P IIFIDE+D+    R    +  D EV   L  E +   DG      V +I ATNR + +D A LR  RL ++    LP   Q+  +  V      L  DE DL+         S +++  +C+EA + A ++
Sbjct:  102 DLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRER----SSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKE 312          
The following BLAST results are available for this feature:
BLAST of EY756474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
NSF1_DROME1.718e-2634.11Vesicle-fusing ATPase 1 OS=Drosophila melanogaster... [more]
ATD1A_DANRE1.718e-2633.18ATPase family AAA domain-containing protein 1-A OS... [more]
VPS4A_RAT2.244e-2636.36Vacuolar protein sorting-associated protein 4A OS=... [more]
VPS4A_MOUSE2.244e-2636.36Vacuolar protein sorting-associated protein 4A OS=... [more]
VPS4A_HUMAN2.244e-2636.36Vacuolar protein sorting-associated protein 4A OS=... [more]
NSF2_DROME2.244e-2633.64Vesicle-fusing ATPase 2 OS=Drosophila melanogaster... [more]
ATAD1_RAT6.530e-2632.09ATPase family AAA domain-containing protein 1 OS=R... [more]
ATAD1_MOUSE6.530e-2632.09ATPase family AAA domain-containing protein 1 OS=M... [more]
ATAD1_HUMAN6.530e-2632.09ATPase family AAA domain-containing protein 1 OS=H... [more]
MSP1_YEAST1.114e-2535.94Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756474 ID=EY756474; Name=EY756474; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGGTGATATTCAAAAGCAGGAAATTCGTGAGGCTGTGGAGT
TACCGCTGACTCACCATGAGCTATACAAGCAAATTGGTATAGATCCTCCA
CGTGGTGTTTTACTTTATGGTCCTCCTGGAACTGGTAAAACTATGCTTGC
AAAGGCTGTTGCCAATCATACAACTGCAGCATTCATTAGAGTTGTTGGCT
CTGAGTTTGTTCAGAAGTACCTGGGTGAGGGTCCACGAATGGTTCGGGAT
GTTTTTCGTCTTGCTAAAGAGAATGCCCCAGCTATTATTTTTATTGATGA
GGTAGATGCTATAGCTACAGCTAGGTTTGATGCTCAAACTGGAGCTGATA
GAGAAGTTCAACGAATCCTTATGGAACTCCTCAATCAGATGGACGGATTT
GATCAGACTGTAAATGTTAAGGTCATCATGGCAACAAATCGGGCTGACAC
ATTGGACCCTGCACTTCTCCGTCCTGGAAGGCTTGACCGAAAAATTGAAT
TTCCTTTGCCTGATAGACGACAAAAGAGGCTCGTTTTTCAGGTTTGCACG
GCAAAGATGAACTTAAGCGATGAGGTAGACTTGGAGGATTATGTTTCCCG
TCCAGATAAAATCAGTGCTGCTGAGATTGCAGCCATCTGCCAAGAGGCAG
GAATGCATGCTGTGCGCAAGAACAGGTATGTCATACTCCCCAANNGACTT
TGAAAGGGTTATCGGACCAATGTGAAGAAGCCCGACACCGACTTCGAATT
TTTACAGTGAAGAGGGCTAGAAGAAGTTATGAAGATCACTTTGATAATGG
TNGNCAAATGTCTCTCTCACTATGAAAATTGNTGCCCCATGTCATGCATC
GCCACACTTGGGATATGCTTTATAGACTCATTGGCATATAATCCAGCTTT
AGTAGAGTAGCGTAAAATCGAAATCT
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