EY756474

Overview
NameEY756474
Unique NameEY756474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 253.832 bits (647), Expect = 9.958e-67
Identity = 118/219 (53.88%), Postives = 167/219 (76.26%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 676
            Q +EI+E +ELP+ H EL++ +GI  P+GV+LYGPPGTGKT+LA+AVA+HT   FIRV G+E VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I + R +   G D EVQR ++ELLNQ+DGF+ + N+K+IMATNR D LDPALLRPGR+DRKIEFP P    +  + ++ + KMNL+  ++L     + +  S A++  +C EAGM+A+R+ R
Sbjct:  156 QIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERR 374          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.301e-66
Identity = 128/222 (57.66%), Postives = 162/222 (72.97%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 685
            Q  E+REAVELPL   EL+ QIGI+PP+GVLLYGPPGTGKT+LAKAVA+ T A F+RVVGSE VQKY+GEG R+VR++F LAK+ AP IIFIDE+DA+  +R +A T  DREVQR LM+LL  MDGF+   +VK+I ATNR D LD ALLRPGR DR IE PLPD   +  + +V T  + + + V+L +     +  + A++ AIC EAGM+A+R  R  I
Sbjct:  186 QINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAI 407          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.301e-66
Identity = 123/222 (55.41%), Postives = 170/222 (76.58%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 676
            D Q +EI+E +ELP+ H EL++ +GI  P+GVLLYGPPGTGKT+LA+AVA+HT   FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G  D EVQR ++ELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   +  + ++ + KMNL   +DL+    + +  S AE+ A+C EAGM A+R+ R
Sbjct:  167 DQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.301e-66
Identity = 123/222 (55.41%), Postives = 170/222 (76.58%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 676
            D Q +EI+E +ELP+ H EL++ +GI  P+GVLLYGPPGTGKT+LA+AVA+HT   FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G  D EVQR ++ELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+DRKIEFP P+   +  + ++ + KMNL   +DL+    + +  S AE+ A+C EAGM A+R+ R
Sbjct:  167 DQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.218e-66
Identity = 121/224 (54.02%), Postives = 169/224 (75.45%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 685
            D Q QE++EAVELPLT  E + +IGI+PP+GVLLYG PGTGKT+LAKAVA+ T A FIRVVGSE VQKY+G+G ++VR++F +A++ AP+IIFIDE+D+IA  R +  TGADREVQR LM+LL +MDGFD+  N+++I ATNR D LDPA+LRPGR DR +  P+P    +  + ++   KM L++++D +      + +S A++ AI  EAGM AVR+++ ++
Sbjct:  165 DEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELV 388          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.455e-66
Identity = 122/222 (54.95%), Postives = 168/222 (75.68%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFD-AQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 676
            D Q +EI+E +ELP+ H EL++ +GI  P+GV++YGPPGTGKT+LA+AVA+HT   FIRV GSE VQKY+GEG +MVR++F +A+E+AP+IIF+DE+D+I + R +  + G D EVQR ++ELLNQ+DGF+ T N+K+IMATNR D LDPALLRPGR+DRKIEFP P+   +  + ++ + +MNL+  ++L    S     S AEI A C EAGM A+R+ R
Sbjct:  162 DEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERR 383          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.430e-66
Identity = 127/248 (51.21%), Postives = 177/248 (71.37%), Query Frame = 2
Query:   11 GDIQKQ--EIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRTNVKKPDTDFE 748
            G ++KQ  EIREAVELPL   E+++++GI+PP+GVLL+GPPGTGKT+LA+AVA+ T A F+RVVGSE VQKY+GEG R+VR++F LAK+ +P+IIFIDE+DAI  +R ++ T  DREV R LM+LL +MDGF    +V++I ATNR D LD ALLRPGR DR IE P PD   +  +  +  A MN+  +VD+ D  +R D  + A++ +IC EAGM A+R +  ++      + +  +++K   DFE
Sbjct:  156 GGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTL----EDFEQSIEKFSNDFE 399          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.430e-66
Identity = 117/226 (51.77%), Postives = 166/226 (73.45%), Query Frame = 2
Query:    2 HASGDIQKQ--EIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 673
            H  G ++KQ  E+ EA+ LP+TH E ++++G+ PP+GVLLYGPPGTGKT++A+A A  T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++   DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P    +  + Q+ + KMN++ +V+ E+     D  + A++ A+C EAGM A+R++
Sbjct:  170 HDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.430e-66
Identity = 118/219 (53.88%), Postives = 161/219 (73.52%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            D Q QE+ EAV LP+TH E ++ IGI PP+GVL+YGPPGTGKT+LA+A A  T + ++++ G + VQ ++G+G ++VRD F LAKE  P IIFIDE+DAI T RFD++   DREVQR ++ELLNQ+DGF    N+KVI ATNR D LDPALLR GRLDRKIEFPLP+   +  + Q+ + KMN+S +V+ ++     +  + A++ A+C EAGM A+R+
Sbjct:  174 DKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRR 392          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 1.101e-65
Identity = 121/224 (54.02%), Postives = 167/224 (74.55%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 685
            D Q QE++EAVELPL   E + +IGI+PP+GVLLYG PGTGKT+LAKAVA+ T A FIRVVGSE VQKY+G+G ++VR++F +A++ AP+IIFIDE+D+IA  R +  TGADREVQR LM+LL +MDGFD+  N+++I ATNR D LDPA+LRPGR DR +  P+P    +  + ++   KM L+ ++D +      + +S A++ AI  EAGM AVRK++ ++
Sbjct:  165 DEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALV 388          
The following BLAST results are available for this feature:
BLAST of EY756474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
PRS8_YEAST9.958e-6753.8826S protease regulatory subunit 8 homolog OS=Sacch... [more]
PSMR_METB61.301e-6657.66Proteasome-activating nucleotidase OS=Methanoregul... [more]
PRS8B_ARATH1.301e-6655.4126S protease regulatory subunit 8 homolog B OS=Ara... [more]
PRS8A_ARATH1.301e-6655.4126S protease regulatory subunit 8 homolog A OS=Ara... [more]
PSMR_METMA2.218e-6654.02Proteasome-activating nucleotidase OS=Methanosarci... [more]
PRS8_NAEFO6.455e-6654.9526S protease regulatory subunit 8 homolog OS=Naegl... [more]
PSMR_METPE8.430e-6651.21Proteasome-activating nucleotidase OS=Methanosphae... [more]
PRS6A_SOLLC8.430e-6651.7726S protease regulatory subunit 6A homolog OS=Sola... [more]
PRS6A_DICDI8.430e-6653.8826S protease regulatory subunit 6A homolog OS=Dict... [more]
PSMR_METAC1.101e-6554.02Proteasome-activating nucleotidase OS=Methanosarci... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756474 ID=EY756474; Name=EY756474; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGGTGATATTCAAAAGCAGGAAATTCGTGAGGCTGTGGAGT
TACCGCTGACTCACCATGAGCTATACAAGCAAATTGGTATAGATCCTCCA
CGTGGTGTTTTACTTTATGGTCCTCCTGGAACTGGTAAAACTATGCTTGC
AAAGGCTGTTGCCAATCATACAACTGCAGCATTCATTAGAGTTGTTGGCT
CTGAGTTTGTTCAGAAGTACCTGGGTGAGGGTCCACGAATGGTTCGGGAT
GTTTTTCGTCTTGCTAAAGAGAATGCCCCAGCTATTATTTTTATTGATGA
GGTAGATGCTATAGCTACAGCTAGGTTTGATGCTCAAACTGGAGCTGATA
GAGAAGTTCAACGAATCCTTATGGAACTCCTCAATCAGATGGACGGATTT
GATCAGACTGTAAATGTTAAGGTCATCATGGCAACAAATCGGGCTGACAC
ATTGGACCCTGCACTTCTCCGTCCTGGAAGGCTTGACCGAAAAATTGAAT
TTCCTTTGCCTGATAGACGACAAAAGAGGCTCGTTTTTCAGGTTTGCACG
GCAAAGATGAACTTAAGCGATGAGGTAGACTTGGAGGATTATGTTTCCCG
TCCAGATAAAATCAGTGCTGCTGAGATTGCAGCCATCTGCCAAGAGGCAG
GAATGCATGCTGTGCGCAAGAACAGGTATGTCATACTCCCCAANNGACTT
TGAAAGGGTTATCGGACCAATGTGAAGAAGCCCGACACCGACTTCGAATT
TTTACAGTGAAGAGGGCTAGAAGAAGTTATGAAGATCACTTTGATAATGG
TNGNCAAATGTCTCTCTCACTATGAAAATTGNTGCCCCATGTCATGCATC
GCCACACTTGGGATATGCTTTATAGACTCATTGGCATATAATCCAGCTTT
AGTAGAGTAGCGTAAAATCGAAATCT
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