EY756474

Overview
NameEY756474
Unique NameEY756474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.453e-65
Identity = 115/218 (52.75%), Postives = 162/218 (74.31%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 673
            Q QE+ EA+ LP+TH + ++++GI PP+GVLLYGPPGTGKT++A+A A  T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++   DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P    +  + Q+ + KMN++ +V+ E+     D  + A++ A+C EAGM A+R++
Sbjct:  184 QIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 401          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.203e-65
Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 670
            D Q QE+ EA+ LP+ H E ++ +GI PP+GVL+YGPPGTGKT+LA+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI   RFD++   DREVQR ++ELLNQ+DGF  T  VKVI ATNR D LDPALLR GRLDRKIEFP+P+   +  + Q+ + KMN+S +V+ E+     D  + A+  A+C EAG+ A+R+
Sbjct:  157 DKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRR 375          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 4.184e-65
Identity = 124/246 (50.41%), Postives = 169/246 (68.70%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPXXL*KGYRT--NVKKPDTDFEF 751
            Q +E+RE VELPL + EL+K++GI PP+G LL+GPPGTGKT+LA+AVA+     F++VV S  V KY+GE  RM+R++F  A+++ P I+F+DE+DAI   RF   T ADRE+QR LMELLNQ+DGFD    VKVIMATNR DTLDPALLRPGRLDRKIE  LP+ + +  + ++ + K+    E+D E  V   D  SAA++  +C EAGM A+R  R  ++     K  R   + K+ +T  ++
Sbjct:  158 QIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 7.137e-65
Identity = 116/218 (53.21%), Postives = 161/218 (73.85%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 673
            Q QE+ EA+ LP+TH E ++++GI PP+GVLLYGPPGTGKT++A+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE +P IIFIDE+DAI T RFD++   DREVQR ++ELLNQ+DGF     +KVI ATNRAD LDPAL+R GRLDRKIEFP P    +  + Q+ + KMN++ +V+ E+     D  + A++ A+C EAGM A+R++
Sbjct:  178 QIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 247.669 bits (631), Expect = 7.137e-65
Identity = 121/221 (54.75%), Postives = 166/221 (75.11%), Query Frame = 2
Query:   14 DIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 676
            D Q +EI+E +ELP+ H E ++ +GI  P+GVLLYGPPGTGKT+LA+AVA+HT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DE+D+I  +R +  +G D EVQR ++ELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+   +  + ++ + KMNL+  ++L          S AE+  +C EAGM+A+R+ R
Sbjct:  150 DKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG-SRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR 369          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.137e-65
Identity = 119/221 (53.85%), Postives = 158/221 (71.49%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYV 682
            Q +++RE VE PL H E Y  +GI+PP+GVLLYGPPGTGKT+ A+AVAN T A FIRV+GSE VQKY+GEG RMVR++F +A+     +IF DE+DA+  ARFD   G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD   +  + ++   +M++  ++  +         + AEI ++C EAGM A+R  R V
Sbjct:  185 QIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKV 405          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.321e-65
Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 676
            Q +E+RE VELPL + E++++IG++PP+GVLLYGPPGTGKTMLAKAVA  + A FI VV SEF QK++GEG R+VR++F +AK  AP+IIFIDE+DAI   R D  T  +RE+QR LM+LL ++DGFD   NVK+I ATNR D LDPALLRPGR DR IE PLPD + +  +F +   KM + D ++LE      +  S A+I  +C EA   A+R  R
Sbjct:  142 QIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGR 360          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.321e-65
Identity = 123/222 (55.41%), Postives = 163/222 (73.42%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 685
            Q +EI EAV LP+ +  L++++GIDPP+GVLL+GPPGTGKT+LAKAVA  T A FIRVVGSE V K++GEG R+VR++FRLA+E AP+I+FIDE+DAIA+ R D  T  DREVQR +++LL ++DGFD   NVKVI ATNR D +DPA+LRPGR DR IE PLP  R +  +  + T K  ++ +VDLE      +  S A++ A+  EAG +A+R+   VI
Sbjct:  147 QIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVI 368          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 246.899 bits (629), Expect = 1.217e-64
Identity = 119/221 (53.85%), Postives = 157/221 (71.04%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYV 682
            Q +++RE VE PL H E +  +GI+PP+GVLL+GPPGTGKT+ A+AVAN T A FIRV+GSE VQKY+GEG RMVR++F +A+     +IF DE+DAI  ARFD   G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD   +  + ++    M++  ++  E         + AEI ++C EAGM A+R  R +
Sbjct:  183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403          
BLAST of EY756474 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 246.514 bits (628), Expect = 1.590e-64
Identity = 119/221 (53.85%), Postives = 157/221 (71.04%), Query Frame = 2
Query:   20 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYV 682
            Q +++RE VE PL H E +  +GI+PP+GVLL+GPPGTGKT+ A+AVAN T A FI V+GSE VQKY+GEG RMVR++F +A+     +IF DE+DAI  ARFD   G D EVQR ++EL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD   +  +F++    M++  ++  E         + AEI ++C EAGM A+R  R +
Sbjct:  183 QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKI 403          
The following BLAST results are available for this feature:
BLAST of EY756474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 383
Match NameE-valueIdentityDescription
PRS6A_ORYSJ2.453e-6552.7526S protease regulatory subunit 6A homolog OS=Oryz... [more]
PR6AB_XENLA3.203e-6553.8826S protease regulatory subunit 6A-B OS=Xenopus la... [more]
PRS10_CAEEL4.184e-6550.41Probable 26S protease regulatory subunit S10B OS=C... [more]
PS6AB_ARATH7.137e-6553.2126S protease regulatory subunit 6A homolog B OS=Ar... [more]
PRS8_XENLA7.137e-6554.7526S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PRS7_CAEEL7.137e-6553.8526S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PSMR_SULSO9.321e-6555.25Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_AERPE9.321e-6555.41Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
PRS7_PONAB1.217e-6453.8526S protease regulatory subunit 7 OS=Pongo abelii ... [more]
PRS7_RAT1.590e-6453.8526S protease regulatory subunit 7 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756474 ID=EY756474; Name=EY756474; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGGTGATATTCAAAAGCAGGAAATTCGTGAGGCTGTGGAGT
TACCGCTGACTCACCATGAGCTATACAAGCAAATTGGTATAGATCCTCCA
CGTGGTGTTTTACTTTATGGTCCTCCTGGAACTGGTAAAACTATGCTTGC
AAAGGCTGTTGCCAATCATACAACTGCAGCATTCATTAGAGTTGTTGGCT
CTGAGTTTGTTCAGAAGTACCTGGGTGAGGGTCCACGAATGGTTCGGGAT
GTTTTTCGTCTTGCTAAAGAGAATGCCCCAGCTATTATTTTTATTGATGA
GGTAGATGCTATAGCTACAGCTAGGTTTGATGCTCAAACTGGAGCTGATA
GAGAAGTTCAACGAATCCTTATGGAACTCCTCAATCAGATGGACGGATTT
GATCAGACTGTAAATGTTAAGGTCATCATGGCAACAAATCGGGCTGACAC
ATTGGACCCTGCACTTCTCCGTCCTGGAAGGCTTGACCGAAAAATTGAAT
TTCCTTTGCCTGATAGACGACAAAAGAGGCTCGTTTTTCAGGTTTGCACG
GCAAAGATGAACTTAAGCGATGAGGTAGACTTGGAGGATTATGTTTCCCG
TCCAGATAAAATCAGTGCTGCTGAGATTGCAGCCATCTGCCAAGAGGCAG
GAATGCATGCTGTGCGCAAGAACAGGTATGTCATACTCCCCAANNGACTT
TGAAAGGGTTATCGGACCAATGTGAAGAAGCCCGACACCGACTTCGAATT
TTTACAGTGAAGAGGGCTAGAAGAAGTTATGAAGATCACTTTGATAATGG
TNGNCAAATGTCTCTCTCACTATGAAAATTGNTGCCCCATGTCATGCATC
GCCACACTTGGGATATGCTTTATAGACTCATTGGCATATAATCCAGCTTT
AGTAGAGTAGCGTAAAATCGAAATCT
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