EY756472

Overview
NameEY756472
Unique NameEY756472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4938 contig Csv1_Contig4938:272..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756472 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.676e-11
Identity = 35/95 (36.84%), Postives = 44/95 (46.32%), Query Frame = 3
Query:   24 VNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQT-PCANREQYVFWDAFHPTEAVN 305
            +NQ  + FN  +     NL  NLPG +    DI     +++ N   YGF    R CCG G       C       C+N   YVFWD FHP+EA N
Sbjct:  243 LNQDAVSFNTKLNNTSINLTNNLPGLKLVVFDIYNPLLNMVINPVEYGFFESRRACCGTGTMETSFLCNALSVGTCSNATNYVFWDGFHPSEAAN 337          
BLAST of EY756472 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.495e-11
Identity = 33/96 (34.38%), Postives = 49/96 (51.04%), Query Frame = 3
Query:   27 NQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCL---PFQTPCANREQYVFWDAFHPTEAVN 305
            N + + FN+ +  M+  L+  LPG+   F +    F  ++ N  S+GF V+   CC  G       C    PF   C N ++YVFWD+FHPT+  N
Sbjct:  241 NDIAVQFNSKLDKMVEKLSKELPGSNLVFSNPYEPFMRIIKNPSSFGFEVVGAACCATGMFEMGYGCQRNNPF--TCTNADKYVFWDSFHPTQKTN 334          
BLAST of EY756472 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 33/94 (35.11%), Postives = 56/94 (59.57%), Query Frame = 3
Query:   21 EVNQLVMPFNANVKTMINNLNANLPGARFTFIDIARMFEDLLTNYRSYGFSVIDRGCCGIGRNGGQITCLPFQTP--CANREQYVFWDAFHPTE 296
            ++N + + FN+ + + ++ L   LP +R  FID+     D++ N  +YGF V D+GCCG G+      C  F TP  C++   +VF+D++HP+E
Sbjct:  240 KLNNMALHFNSKLSSSLDTLKKELP-SRLIFIDVYDTLLDIIKNPTNYGFKVADKGCCGTGKIELMELCNKF-TPFTCSDASTHVFFDSYHPSE 331          
The following BLAST results are available for this feature:
BLAST of EY756472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
GDL72_ARATH2.676e-1136.84GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL34_ARATH3.495e-1134.38GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL52_ARATH7.787e-1135.11GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-A03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756472 ID=EY756472; Name=EY756472; organism=Citrus sinensis; type=EST; length=587bp
TTCGTCGACCCACGCGTCCGGAAGTGAATCAACTTGTTATGCCTTTTAAT
GCAAATGTGAAGACTATGATTAACAATCTTAATGCCAATCTTCCTGGTGC
AAGATTCACCTTCATTGACATTGCCCGCATGTTTGAAGATCTCCTCACCA
ATTATAGATCATACGGATTCAGTGTAATAGATCGAGGGTGCTGTGGCATT
GGACGAAACGGAGGCCAAATTACATGTCTTCCATTCCAAACACCATGTGC
AAATCGAGAACAATACGTTTTCTGGGATGCATTTCACCCAACAGAAGCTG
TGAACATTATGTTTGGAAGAAAAGCTTTCTATGGTGACCAGAGCGTTGTT
TATCCCATGAACATCCAGCAGCTTGCCAGTCTTTAAACTTAGAAATTAAA
TGGACATATATGTTATTGTAATGTTTCTTGCTTGCTTAATTGCTTTGCAT
AATTAGCCACCGGTGTCTCGTCTGTCCATGTGAGTTTTTACTTGTTTAAT
TTGCTTGTGGGAAGTTTATGTAATCGAAGAACAAGTTGTGATTGTGTTTT
ATTGTGTTGCTAGTGGTTCAGTAAAAAAAAAAAAAAA
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