EY756460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_BATOE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Batophora oerstedii GN=RBCS PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28 Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = 3 Query: 69 SNG--GRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFE-LEKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 SNG + + M VW P K FET SYLPPL+D+ + K++ Y+LR+ W PCLEF ++ +V ++ G Y D RYWTMWKLPM+GC D + VL E+ K +P +++R++ FD RQVQ FL +P Sbjct: 26 SNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 161
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28 Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 M VW P K FET SYLPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL ++ K +P +++R++ FD RQVQ FL +PP Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICGFLVHRPP 170
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_ACEAT (Ribulose bisphosphate carboxylase small chain 2, chloroplastic (Fragment) OS=Acetabularia acetabulum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28 Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 34 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 160
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_ACEAT (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Acetabularia acetabulum GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28 Identity = 58/127 (45.67%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.717e-28 Identity = 57/127 (44.88%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 M VW P K FET S+LPPL+DE + K++ Y+L + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL E+ +P +++R++ FD RQVQ FL +PP Sbjct: 44 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_ACECL (Ribulose bisphosphate carboxylase small chain 1 (Fragment) OS=Acetabularia cliftonii GN=RBCS-1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.884e-24 Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 3 Query: 138 SYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHHSSPG-----YYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 SYLPPL+DE + K++ Y+L + W PCLEF ++ + ++ G Y D RYWTMWKLPM+GCTD + VL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 2 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 113
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_PROHO (Ribulose bisphosphate carboxylase small chain OS=Prochlorothrix hollandica GN=cbbS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22 Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 +++ETLSYLPPLSD+ + ++I Y++R G+IP +EF + YWTMWKLP++ T VL EV E + EYP+ ++R++GFDN +Q Q +SF+ KP Sbjct: 8 RRYETLSYLPPLSDQQIARQIEYMVREGYIPAVEFNEDSDATTC------------YWTMWKLPLFHATSTQEVLGEVRECRTEYPNCYIRVVGFDNIKQCQSVSFIVHKP 106
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_SYNP2 (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cbbS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 K++ETLSYLPPLSD+ + +++ Y++ G+IP +EFE K HH WT+WKLP++ + A VL EV E + EY ++R++GFDN +Q Q +SF+ KP Sbjct: 8 KRYETLSYLPPLSDQQIARQVQYMMDQGYIPGIEFE--KDPTPELHH----------WTLWKLPLFNASSAQEVLNEVRECRSEYSDCYIRVVGFDNIKQCQTVSFIVYKP 106
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_SYNY3 (Ribulose bisphosphate carboxylase small chain OS=Synechocystis sp. (strain PCC 6803) GN=cbbS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.953e-21 Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 +++ETLSYLPPL+D+ + K++ +LL G+IP +EFE + E H +WTMWKLP +G A VL EV E + E P+ ++R+IGFDN +Q Q +SF+ KP Sbjct: 8 RRYETLSYLPPLTDQQIAKQVEFLLDQGFIPGVEFEEDP---QPETH---------FWTMWKLPFFGGATANEVLAEVRECRSENPNCYIRVIGFDNIKQCQTVSFIVHKP 106
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_SYNP6 (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cbbS PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 2.314e-20 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 ++FET SYLPPLSD + +I Y++ G+ P +EF HS+P + YWTMWKLP++ C VL EV E + EY ++R+ GFDN +Q Q +SF+ +P Sbjct: 10 RRFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFN---------EHSNPEEF---YWTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQTVSFIVHRP 108 The following BLAST results are available for this feature:
BLAST of EY756460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756460 ID=EY756460; Name=EY756460; organism=Citrus sinensis; type=EST; length=660bpback to top |