EY756460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.148e-19 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 +++ETLSYLPPL+D + K++ Y+L G+IP +EF S P YWT+WKLP++G + VL EV + +YP ++R++GFDN +Q Q +SF+ KP Sbjct: 8 RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFN---------EVSEPTEL---YWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19 Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 +KFET SYLPPL+D+ + +++ Y L +G+ P +EF S G + WT+WKLP++G VL E+ ++++P++++R++ FD+ RQVQ + FL KP Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEF------------SFTGKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.694e-18 Identity = 44/106 (41.51%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 123 KFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 440 KFETLSYLP L+ + + ++++Y++ GW P +E H+ P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN +Q Q S + Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 K+FET SYLP +S E + K+I Y++ GW P +E H P YW MWKLPM+G TD ++ E+ ++ P+ +++IG+DN RQ Q + L +P Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4) HSP 1 Score: 84.3445 bits (207), Expect = 5.898e-16 Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQ 419 +KFET SYLP + + + K++ Y++ GW P +E H+ P YW MWKLPM+G TD +LKE K +P++ VR+IGFDN Q Sbjct: 17 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQ 104
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.314e-15 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 +KFET SYLP L E + K++ Y++ GW P +E H+ P YW MWKLPM+G TD +L E K +P VR+IG+DN Q Q + + + P Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGTAMVIFRGP 116
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.927e-15 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 123 KFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 ++ET SYLPPL+ E +L++I Y+L +GW LE H P YW MWK+P +G D +L E+ ++ YP VR++G+D Q + SFLA +P Sbjct: 15 RYETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 425 +KFET SYLP ++ + K++ YL+ GW P +E H+ P + YW MWKLPM+G TD +L E K P++ VR++G+DN Q Q Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15 Identity = 42/110 (38.18%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 120 KKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAK 449 +K ET SYLP ++ + + ++ Y++ GW P +E HS P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN Q Q + L + Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQGANMLVKR 114
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.112e-14 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 3 Query: 264 SPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 455 S Y D RYWTMWKLPM+GCTD + VL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 73 The following BLAST results are available for this feature:
BLAST of EY756460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756460 ID=EY756460; Name=EY756460; organism=Citrus sinensis; type=EST; length=660bpback to top |