EY756460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.308e-54 Identity = 92/149 (61.74%), Postives = 118/149 (79.19%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S++ P ++++N SNGGR++CM+VWP G+KKFETLSYLPPLS E LLK++ YL+RS W+PCLEF + G+++REH+ SPGYYDGRYWTMWKLPM+GC T V+ EV EV+KEYP + RIIGFDN RQVQ +SF+A+KPPG Sbjct: 21 STAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQVQSVSFIASKPPG 168
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.344e-52 Identity = 93/132 (70.45%), Postives = 107/132 (81.06%), Query Frame = 3 Query: 57 TSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 T I SNG RV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YLLR GW+PCLEFEL KG+VY EH+ SP YYDGRYWTMWKLPM+G TD V+KEV EV YP +FVR+IGF+N RQVQCISF+A P Sbjct: 2 TDITSNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTP 133
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.670e-52 Identity = 91/149 (61.07%), Postives = 119/149 (79.87%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S+++ P ++++ + ++ SNGGR++CM+VWP G KKFETLSYLPPLS + LLK++ YLLR+GWIPCLEF + G+VYRE+ +SP YYDGRYWTMWKLPM+GC DAT V KE+ E K YP +F R+IGFDN +Q QC+SF+A KPPG Sbjct: 22 STASLPVARRSSRSLGNV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKPPG 168
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 8.154e-50 Identity = 90/151 (59.60%), Postives = 116/151 (76.82%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 S++ FP++ K +N SNGGRV+CM+VWPP G KFETLSYLP L++E L+KE+ YLLR+ W+PCLEF+LE G + R+++ SPGYYDGRYW MWKLPM+GCT+A+ V+ EV E K YP +F+R+IGFDN RQVQCISF+ KP Sbjct: 21 STAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48 Identity = 89/151 (58.94%), Postives = 112/151 (74.17%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 S + FP++K +N SNG RV+CM+VWPP KKFETLSYLP L+ E L+KE+ YLL++ W+PCLEFE E G + R + +SPGYYDGRYW MWKLPM+GCT+A+ VL EV E K YP++F+R+IGFDN RQVQCISF+ KP Sbjct: 37 SMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.102e-46 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 M+VWPP GLKKFETLSYLPPL+ E LL E++YLL GWIP LEFE++ G+VYREH SPGYYDGRYWTMWKLPM+G TD V+ EV EV+K P +FVR IGF++KR+VQCISF+A KP G Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKPAG 122
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.469e-46 Identity = 85/149 (57.05%), Postives = 111/149 (74.50%), Query Frame = 3 Query: 12 SSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 S+++ P +++ + + SNGGR++CM+VWP G KKFETLSYLPPL+ E LLK++ YLLR+ W+PCLEF E G+VYRE+ +SP YYDGRYWTMWKLPM+GCTDA+ V KE+ E YP I+GFDN RQ Q ++F+A KP G Sbjct: 21 STASLPVARRSTTSLAKV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP-ELRAILGFDNIRQTQWLTFIAYKPAG 166
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.001e-44 Identity = 77/107 (71.96%), Postives = 95/107 (88.79%), Query Frame = 3 Query: 138 SYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 +YLPPLS EALLK++ YL+RS W+PCLEF + G+++REH++SPGYYDGRYWTMWKLPM+GCTDAT V+ EV EV+KEYP ++VRIIGFDN RQVQC+SF+A KPPG Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 106
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.258e-42 Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 57 TSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEY-PHSFVRIIGFDNKRQVQCISFLAAKP 452 T +NG RV CM+VW P KFETLSYLPPLS +AL K+I Y+++SGW PC+EF+++ G V RE + PGYYDGRYWTMWKLPM+GCTD+ VL+E+ E +K Y ++R +GFDN RQVQC SF+ +P Sbjct: 47 TKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQP 178
BLAST of EY756460 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 262 HSP 2 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 406 HSP 3 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 693 HSP 4 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 836 HSP 5 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 1124 HSP 6 Score: 136.732 bits (343), Expect = 1.001e-31 Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD YWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 549 HSP 7 Score: 136.732 bits (343), Expect = 1.001e-31 Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 452 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 8 Score: 134.42 bits (337), Expect = 4.970e-31 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 3 Query: 93 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEFEL-EKGWVYREHH-----SSPGYYDGRYWTMWKLPMYGCTDATHVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 458 MKVW P KKFET SYLPPLSD + K++ ++ G PCLEF E ++ ++ ++ GYYD RYWTMWKLPM+GCTDA+ VL+E+ E ++ YP +VR + FD+ +QVQ ISF+ +P G Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSG 980 The following BLAST results are available for this feature:
BLAST of EY756460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756460 ID=EY756460; Name=EY756460; organism=Citrus sinensis; type=EST; length=660bpback to top |