EY756459

Overview
NameEY756459
Unique NameEY756459
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756459 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.823e-23
Identity = 86/294 (29.25%), Postives = 140/294 (47.62%), Query Frame = 2
Query:   26 GVMMTHGNVLATVSAVMTIVPD---LGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKARAILGGRIRFILSGGAPLSADTQRSINICLGAPIGQGYGLTETCAGGTFSEVDDSSXGRVGAPLPCSFI--------NYRLA*RWYLTSDSQCTWGNSHCWSNVQLGIQNEDKTRAYKLMTKDEWVYSGIVDR-SAEGSLK 865
            G M+TH NV++  SA +        L + D+++++LPLAH+ E   + ++   G+ IG+  G    L D           D   L+PT+   VP +L+R+ D  R    A   + + L D A  R+ + +             +W+ L+F K ++ LGG++R +++G AP+SA     +   LG    +GYG TE  AG + S   D + G VGAP+PC+FI        NY  A    +     C  G      NV  G   +D  +  + + KD W+++G + +    G+LK
Sbjct:  285 GAMITHKNVVSDCSAFVKATEKALVLNASDIHISFLPLAHMYEQLLQCVMLCHGAKIGFFQGDIRLLMD-----------DLKALQPTIFPVVPRLLNRMFD--RIFAQANTTVKRWLLDFASKRKEAELRSGIIR----NNSVWDKLIFHKIQSSLGGKVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCSLSVPGDWTAGHVGAPMPCNFIKLVDVEEMNYMAA----MGEGEVCVKG-----PNVFKGYL-KDPAKTAEALDKDGWLHTGDIGKWLPNGTLK 551          
BLAST of EY756459 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23
Identity = 86/294 (29.25%), Postives = 138/294 (46.94%), Query Frame = 2
Query:   26 GVMMTHGNVLATVSAVMTIVPDL---GSKDVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKARAILGGRIRFILSGGAPLSADTQRSINICLGAPIGQGYGLTETCAGGTFSEVDDSSXGRVGAPLPCSFI--------NYRLA*RWYLTSDSQCTWGNSHCWSNVQLGIQNEDKTRAYKLMTKDEWVYSGIVDR-SAEGSLK 865
            G M+TH N++   S  +           +DV +++LPLAH+ E   E ++   G+ IG+  G    L D           D  VL+PT+   VP +L+R+ D +  +  A   + + L D A  R+ + +             LW+ L+F K ++ LGG++R +++G AP+SA     +   LG    +GYG TE  AG   S   D + G VGAP+PC++I        NY+ A          C  G     +NV  G   +D  R  + + KD W+++G + +    G+LK
Sbjct:  286 GAMVTHQNIMNDCSGFIKATESAFIASPEDVLISFLPLAHMFETVVECVMLCHGAKIGFFQGDIRLLMD-----------DLKVLQPTIFPVVPRLLNRMFDRIFGQ--ANTSVKRWLLDFASKRKEAELRSGIVR----NNSLWDKLIFHKIQSSLGGKVRLMITGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAA----KGEGEVCVKG-----ANVFKGYL-KDPARTAEALDKDGWLHTGDIGKWLPNGTLK 552          
BLAST of EY756459 vs. ExPASy Swiss-Prot
Match: LCF4_YEAST (Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyces cerevisiae GN=FAA4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.401e-22
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 2
Query:   26 GVMMTHGNVLATVSAV-MTIVPDLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKARAILGGRIRFILSGGAPLSADTQRSINICLGAPIGQGYGLTETCAGGTFSEVDDSSXGRVG 652
            GV++TH N++A +  V   ++  +G  D  +A+LPLAH+ EL  E         +GY    TLT TS+   R  QGD    +PTVM  V A+ + VR G+  K++   G S+ LF   YA +   I  S          L + L+F + R   GG +RFIL+GG+ +S D Q+ ++  L  P+  GYGLTE  A     E +    G  G
Sbjct:  279 GVVLTHYNIVAGIGGVGHNVIGWIGPTDRIIAFLPLAHIFELTFEFEAFYWNGILGYANVKTLTPTST---RNCQGDLMEFKPTVMVGVAAVWETVRKGILAKINELPGWSQTLFWTVYALKERNIPCSG---------LLSGLIFKRIREATGGNLRFILNGGSAISIDAQKFLSNLL-CPMLIGYGLTEGVANACVLEPEHFDYGIAG 475          
BLAST of EY756459 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22
Identity = 84/290 (28.97%), Postives = 140/290 (48.28%), Query Frame = 2
Query:   26 GVMMTHGNVLATVSAVMTIVPDLGSK---DVYLAYLPLAHVLELAAENLIAGVGSAIGY--GTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVFSKARAILGGRIRFILSGGAPLSADTQRSINICLGAPIGQGYGLTETCAGGTFSEVDDSSXGRVGAPLPCSFIN-YRLA*RWYLTSDSQ---CTWGNSHCWSNVQLGIQNEDKTRAYKLMTKDEWVYSGIVDR-SAEGSLK 865
            G M+TH N+++  SA +    +  +    D  +++LPLAH+ E   E ++   G+ IG+  G    L D           D  VL+PTV   VP +L+R+ D +  + +    L + L D A  R+ + +             LW+ L+F K ++ LGGR+R +++G AP+SA     +   LG    +GYG TE  AG   +   D + G VGAP+PC+ I    +    Y+ ++ +   C  G      NV  G   +D  +  + + KD W+++G + +    G+LK
Sbjct:  285 GAMVTHRNIVSDCSAFVKATENTVNPCPDDTLISFLPLAHMFERVVECVMLCHGAKIGFFQGDIRLLMD-----------DLKVLQPTVFPVVPRLLNRMFDRIFGQANTT--LKRWLLDFASKRKEAELRSGIIR----NNSLWDRLIFHKVQSSLGGRVRLMVTGAAPVSATVLTFLRAALGCQFYEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKG-----PNVFQGYL-KDPAKTAEALDKDGWLHTGDIGKWLPNGTLK 551          
BLAST of EY756459 vs. ExPASy Swiss-Prot
Match: LCF2_YEAST (Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyces cerevisiae GN=FAA2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.075e-14
Identity = 67/220 (30.45%), Postives = 105/220 (47.73%), Query Frame = 2
Query:   26 GVMMTHGNVLATVS---AVMTIVPDLGSKDVY-LAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWGLEKLLWNLLVF-----SKARAILG-GRIRFILSGGAPLSADTQRSINICLGAPIGQGYGLTETCAGGTFSEVDDSSXGRVGA 655
            GV M+H N+ + ++   +   I PD  ++ +Y + +LPLAH+ E         +G  IG+   L   D +  ++     D  +L+P  +A VP IL R   G++  +D K  + + + +      L + +  +    G +K + N LV+      K R  LG     FI++G AP+S DT   +   L   I QGYGLTET AG   SE  +   G  GA
Sbjct:  309 GVEMSHRNIASGIAFAFSTFRIPPDKRNQQLYDMCFLPLAHIFERMVIAYDLAIGFGIGF---LHKPDPTVLVE-----DLKILKPYAVALVPRILTRFEAGIKNALD-KSTVQRNVANTI----LDSKSARFTARGGPDKSIMNFLVYHRVLIDKIRDSLGLSNNSFIITGSAPISKDTLLFLRSALDIGIRQGYGLTETFAGVCLSEPFEKDVGSCGA 515          
BLAST of EY756459 vs. ExPASy Swiss-Prot
Match: ACBG2_RAT (Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus norvegicus GN=Acsbg2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11
Identity = 75/284 (26.41%), Postives = 123/284 (43.31%), Query Frame = 2
Query:   26 GVMMTHGNVLATVSAV---MTIVPDLGSKDVYLAYLPLAHVLELAAENLIAGVGSAIGYGTPLTLTDTSSKIKRGTQGDASVLRPTVMASVPAILDRVRDGVRKKVDAKGGLSKKLFDLAYARRLSAINGSWFGAWG--LEKLLWNLLVFSKARAILG-GRIRFILSGGAPLSADTQRSINICLGAPIGQGYGLTETCAGGTFSEVDDSSXGRVGAPLPCSFINYRLA*RWYLTS----DSQCTWGNSHCWSNVQLG-IQNEDKTRAYKLMTKDEWVYSGIVDR 844
            GVM++H N+  T  A+   + ++   G +D  ++YLPL+H+   AA+ +   +   +G    LT       ++         ++PT    VP + ++++D +++ V     L KK F  A    L        G     +   +   LVF+K R  LG        SG +PLS D      + L  PIG+ YG+TE C+G     V   S  RV   L C  +        Y  +       C WG      +V +G +  ED T   +++ +D W++SG + R
Sbjct:  236 GVMLSHDNITWTAGAMAREIELIHVSGKQDTIVSYLPLSHI---AAQLMDIWIPIKVGV---LTFFAQPDALRGTLVYTLQEVKPTYFLGVPRVWEKMQDTIKENVAKSSNLRKKAFAWAKMLGLKVNTKKMLGKRDIPMNYRMAKALVFTKVRTSLGLDNCHTFFSGASPLSQDVSEFF-LSLDIPIGEIYGMTE-CSGP--HTVSCKSIYRV---LSCGKVLNGCKNMLYKQNKDGVGEVCMWGR-----HVFMGYLGKEDAT--LEVLDEDGWLHSGDIGR 499          
The following BLAST results are available for this feature:
BLAST of EY756459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ACSL1_CAVPO2.823e-2329.25Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL1_RAT6.289e-2329.25Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
LCF4_YEAST1.401e-2235.24Long-chain-fatty-acid--CoA ligase 4 OS=Saccharomyc... [more]
ACSL1_HUMAN2.390e-2228.97Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
LCF2_YEAST1.075e-1430.45Long-chain-fatty-acid--CoA ligase 2 OS=Saccharomyc... [more]
ACBG2_RAT5.522e-1126.41Long-chain-fatty-acid--CoA ligase ACSBG2 OS=Rattus... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-H02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756459 ID=EY756459; Name=EY756459; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGACTGGTTTTTCCCGGGTGTAATGATGACACATGGCAATG
TCTTAGCCACAGTTTCTGCAGTCATGACAATCGTTCCTGACCTGGGAAGC
AAGGATGTTTATTTGGCATACCTACCTCTGGCTCATGTTCTGGAATTAGC
AGCTGAGAACCTAATTGCTGGTGTTGGAAGCGCAATAGGATATGGTACCC
CTTTGACTCTCACTGATACCTCAAGCAAAATAAAAAGGGGTACCCAGGGG
GATGCATCTGTTTTGAGGCCAACTGTGATGGCCTCTGTCCCAGCAATACT
CGACCGTGTTCGAGATGGTGTACGCAAGAAAGTAGATGCAAAAGGTGGAC
TTTCCAAGAAATTGTTTGACTTGGCATATGCTCGCAGACTGTCTGCAATA
AATGGTAGCTGGTTTGGGGCATGGGGCCTGGAAAAACTTTTGTGGAACCT
CCTTGTGTTTTCGAAAGCTCGTGCAATTCTAGGAGGTCGGATCCGGTTTA
TACTTTCTGGAGGTGCTCCACTTTCTGCTGATACTCAAAGATCTATCAAC
ATTTGCCTTGGTGCTCCAATAGGGCAAGGGTATGGGCTTACTGAGACGTG
TGCTGGGGGTACCTTTTCTGAGGTGGATGATTCATCTGNTGGTCGTGTCG
GNGCTCCACTTCCTTGCTCATTCATTAATTATAGACTGGCCTGAAGGTGG
TATTTAACTAGTGATTCCCAATGCACGTGGGGAAATAGTCATTGCTGGTC
AAATGTCCAGTTGGGTATTCAAAATGAAGACAAAACTAGAGCGTACAAGT
TGATGACAAAGGATGAGTGGGTCTATTCGGGGATCGTGGACCGGTCTGCT
GAAGGTTCCTTAAAAAATGGACGAAAAAGACA
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