EY756445

Overview
NameEY756445
Unique NameEY756445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 261.151 bits (666), Expect = 6.034e-69
Identity = 122/169 (72.19%), Postives = 145/169 (85.80%), Query Frame = 3
Query:  120 KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLST 626
            KL S++F  KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQDKIRPLWRHY+  TQGLIFVVD  DRDRI EAR ELHR++N+ E+RDA++L+FANKQDLP+AM   EI +KLGL  +R R+WY+Q +CATSG+GL EGL WL++
Sbjct:    3 KLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTS 171          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3)

HSP 1 Score: 259.61 bits (662), Expect = 1.756e-68
Identity = 123/182 (67.58%), Postives = 150/182 (82.42%), Query Frame = 3
Query:  102 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTTSLTRPE 647
            MG  F+++  R   K ++RILMVGLD +GKTTILYKLKLGE+VTT+PTIGFN+ETVEYK I+FTVWD+GGQ+KIR LWRHYFQN QGLIFVVDS+D +R+ EAR+ELHR+L ++EL  A +LVFANKQD  NA+  AE+ +KLGLHSL +R W IQ T A SG+GLYEGL+WLSTT   +PE
Sbjct:    1 MGARFSRIAKRFLPKSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPNKPE 182          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.904e-65
Identity = 120/170 (70.59%), Postives = 140/170 (82.35%), Query Frame = 3
Query:  114 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS 623
            F+K FSRLF+ KEMRILM+GLDAAGKTTILYKLKL + V TIPT+GFNVETV YKNI F VWDVGGQDKIRPLWRHYF  T+GLIFVVDS D +RI EAR ELHR++++ E+RD +LLV ANKQDLP A++ A+ITD L L  L+ R W +Q TCA +G+GL EGL WLS
Sbjct:    9 FSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLS 178          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 1.102e-62
Identity = 111/176 (63.07%), Postives = 140/176 (79.55%), Query Frame = 3
Query:  102 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTT 629
            MG+ FT++FS +F  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+GGQ  IRP WR YF NTQ +I+VVDS+D DRI  A++E H +L EDEL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I  TCA  GEGL+EGLDWLS T
Sbjct:    1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNT 176          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 3.207e-62
Identity = 110/176 (62.50%), Postives = 140/176 (79.55%), Query Frame = 3
Query:  102 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTT 629
            MG+ FT++FS +F  KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+GGQ  IRP WR YF NTQ +I+VVDS+D DRI  A++E H +L E+EL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I  TCA  GEGL+EGLDWLS T
Sbjct:    1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNT 176          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.810e-58
Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 3
Query:  114 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTT 629
            F+ +FS    KKE RILM+GLD AGK+T+LYKLKLG++V+TIPTIGFNVET+EYKN+S TVWDVGGQ KIRPLW+HY+  +  +IFVVDS DR+R+ E ++E+  +L +DEL+   +LVFANKQD+ NAMN AEI + L L+S++ R WY+Q   A   +G+YEG DW++ +
Sbjct:   13 FSNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVSTIPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANS 184          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.993e-56
Identity = 106/180 (58.89%), Postives = 135/180 (75.00%), Query Frame = 3
Query:  102 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTTSLTR 641
            MG  F+ +FS LF  +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ  IRP WR Y+ NT  +I+VVDS DRDRI  ++ EL  ML E+ELR A+L+VFANKQD+  AM ++E+ + LGL +L+ R W I  T AT G GL E ++WL  T  +R
Sbjct:    1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.305e-55
Identity = 99/173 (57.23%), Postives = 134/173 (77.46%), Query Frame = 3
Query:  114 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA-TSGEGLYEGLDWLSTT 629
            F+ +FS    KK+ RILM+GLD AGK+T+LYKLKLG+IV+T+PTIGFNVET+EYKN+S TVWDVGGQ KIR LW+HY+  T  +IFVVDS DR+R+ E ++E+  +L ++EL+   +L+FANKQD+ NAMN +EI D L L+S++ R WY+Q   A  S  G+YEG DW++ +
Sbjct:   13 FSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRKWYVQPCSAIKSPHGIYEGFDWVANS 185          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.705e-55
Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 3
Query:  102 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTTSLTR 641
            MG  F+ +FS LF  +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ  IRP WR Y+ NT  +I+VVDS DRDRI  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G GL E ++WL  T  +R
Sbjct:    1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
BLAST of EY756445 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.226e-55
Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 3
Query:  102 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSTTSLTR 641
            MG  F+ +FS LF  +EMRIL++GLD AGKTTILY+L++GE+VTTIPTIGFNVETV YKN+ F VWD+GGQ  IRP WR Y+ NT  +I+VVDS DRDRI  ++ EL  ML E+ELR A+L+VFANKQD+  AM  +E+ + LGL +L+ R W I  T AT G GL E ++WL  T  +R
Sbjct:    1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180          
The following BLAST results are available for this feature:
BLAST of EY756445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF3_DROME6.034e-6972.19ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARF4_ARATH1.756e-6867.58Probable ADP-ribosylation factor At2g15310 OS=Arab... [more]
ARF2_SCHPO6.904e-6570.59Probable ADP-ribosylation factor OS=Schizosaccharo... [more]
ARF3_ARATH1.102e-6263.07ADP-ribosylation factor 3 OS=Arabidopsis thaliana ... [more]
ARF1_BRARP3.207e-6262.50ADP-ribosylation factor 1 OS=Brassica rapa subsp. ... [more]
ARFJ_DICDI2.810e-5858.72ADP-ribosylation factor J OS=Dictyostelium discoid... [more]
ARL1_HUMAN9.993e-5658.89ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARFH_DICDI1.305e-5557.23ADP-ribosylation factor H OS=Dictyostelium discoid... [more]
ARL1_BOVIN1.705e-5558.89ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL1_RAT2.226e-5558.89ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756445 ID=EY756445; Name=EY756445; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGTGTTAAGCTAATAAGCTTCGTCCTCCACACCCCCCCCCC
CTCCCCTCTCTCTCTCGCGTTCTCTGAAGATAGTGATCCCCAGCTGGAAG
AATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAG
AGATGCGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATC
TTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCATTGG
GTTTAATGTGGAGACCGTTGAATATAAAAACATCAGTTTCACTGTGTGGG
ATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTCCAG
AACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCGTAT
TGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAGCTGC
GAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAAATGCA
ATGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTCCCTCAGGCA
GCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAGGGTCTTT
ATGAAGGTCTGGATTGGCTCTCAACAACATCGCTAACAAGGCCTGAAGCT
GTTAAGATCTTTTTGCGGACTGGCAATTCTGGATGCAGGGGTGAATATTA
TCTATTTTTTTTTCTTTTTAACCCTTTTTTGTTGAGACGTTTGGGTTGNN
TGTGTGTTTTGGTCCTANGGATCTTACACTATATTGTAATANAAGAATTG
GTGGGTGATACATGTACTCCANGGTTTTTGGCTCGGGTAAATATCTGTAA
TGAAACTAATTTGTGCACACTCATATTTGAAATGGTTTTTTCGCAAAAAA
AAA
back to top