EY756444

Overview
NameEY756444
Unique NameEY756444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.593e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  173 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.080e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYR+AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  170 GAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.080e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Sbjct:  167 GAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.717e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:   20 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.717e-50
Identity = 90/97 (92.78%), Postives = 97/97 (100.00%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GA++GYR+AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  182 GAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.717e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEVTDP+YPGGSFDPL LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK
Sbjct:  149 GAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.549e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  169 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.549e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  169 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.549e-50
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  169 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of EY756444 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.549e-50
Identity = 92/97 (94.85%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:   13 GAVQGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 303
            GAV+GYRIAGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK
Sbjct:  172 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
The following BLAST results are available for this feature:
BLAST of EY756444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
CB22_PEA1.593e-5095.88Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB24_PETSP2.080e-5095.88Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB23_SOYBN2.080e-5095.88Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB2D_SOLLC2.717e-5095.88Chlorophyll a-b binding protein 1D (Fragment) OS=S... [more]
CB2A_PINSY2.717e-5092.78Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB21_SOYBN2.717e-5095.88Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB2C_SOLLC3.549e-5095.88Chlorophyll a-b binding protein 1C, chloroplastic ... [more]
CB2B_SOLLC3.549e-5095.88Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB2A_SOLLC3.549e-5095.88Chlorophyll a-b binding protein 1A, chloroplastic ... [more]
CB28_PEA3.549e-5094.85Chlorophyll a-b binding protein 8, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756444 ID=EY756444; Name=EY756444; organism=Citrus sinensis; type=EST; length=456bp
CCACGCGTCCGGGGAGCCGTTCAGGGTTACAGAATTGCTGGAGGGCCGCT
CGGTGAAGTGACTGACCCATTGTACCCAGGTGGCAGCTTTGATCCATTGG
GTTTGGCTGATGACCCGGAGGCTTTTGCTGAGCTCAAGGTTAAGGAAATC
AAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTCGTTCAGGC
CATTGTCACCGGCAAGGGACCGTTAGAGAACTTGGCCGACCACTTGGCTG
ACCCTGTCAATAACAATGCCTGGGCCTACGCCACCAACTTTGTCCCCGGA
AAGTGAGCTTCGGTTGATAAGAGTTTTTCTCTTTTCGGTTTCTTGGATAT
CATGTAAATCTGTTGTGAGCTCATGGAAGCTTTAATTTGAGTTGTGATTA
TTTATAAAATGCTTCAATTTGNTCNNNNNNNNNNNNNNNNNNNNAAAAAA
AAAAAA
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