EY756440

Overview
NameEY756440
Unique NameEY756440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_MYTCA (Histone H4 OS=Mytilus californianus PE=3 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_MYRRU (Histone H4 OS=Myrmica ruginodis GN=His4 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_MOUSE (Histone H4 OS=Mus musculus GN=Hist1h4a PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_MASBA (Histone H4 OS=Mastigamoeba balamuthi PE=3 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   27 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 106
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_MACFA (Histone H4 OS=Macaca fascicularis GN=QtsA-19327 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_HUMAN (Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_DROYA (Histone H4 OS=Drosophila yakuba GN=His4 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_DROTE (Histone H4 OS=Drosophila teissieri GN=His4 PE=3 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_DROSI (Histone H4 OS=Drosophila simulans GN=His4 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_DROSE (Histone H4 OS=Drosophila sechellia GN=His4 PE=3 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
The following BLAST results are available for this feature:
BLAST of EY756440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_MYTCA1.862e-3797.50Histone H4 OS=Mytilus californianus PE=3 SV=3[more]
H4_MYRRU1.862e-3797.50Histone H4 OS=Myrmica ruginodis GN=His4 PE=3 SV=2[more]
H4_MOUSE1.862e-3797.50Histone H4 OS=Mus musculus GN=Hist1h4a PE=1 SV=2[more]
H4_MASBA1.862e-3797.50Histone H4 OS=Mastigamoeba balamuthi PE=3 SV=3[more]
H4_MACFA1.862e-3797.50Histone H4 OS=Macaca fascicularis GN=QtsA-19327 PE... [more]
H4_HUMAN1.862e-3797.50Histone H4 OS=Homo sapiens GN=HIST1H4A PE=1 SV=2[more]
H4_DROYA1.862e-3797.50Histone H4 OS=Drosophila yakuba GN=His4 PE=3 SV=2[more]
H4_DROTE1.862e-3797.50Histone H4 OS=Drosophila teissieri GN=His4 PE=3 SV... [more]
H4_DROSI1.862e-3797.50Histone H4 OS=Drosophila simulans GN=His4 PE=3 SV=... [more]
H4_DROSE1.862e-3797.50Histone H4 OS=Drosophila sechellia GN=His4 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756440 ID=EY756440; Name=EY756440; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGAGCAAATAAAAGAAGCATAAAATTAAAGAACTGAAAAGA
GAGAAAAGGAAAGCAGAAGAGAAATGTCAGGAAGAGGAAAGGGAGGCAAA
GGATTAGGAAAGGGAGGAGCGAAGAGGCACCGCAAGGTGCTGAGGGATAA
CATTCAGGGGATCACAAAGCCGGCTATCCGGCGGCTGGCGAGGCGTGGCG
GAGTCAAGCGTATCAGCGGTCTGATTTACGAGGAGACTCGCGGGGTTTTA
AAGATCTTTTTGGAGAACGTGATTCGTGATGCTGTGACTTACACTGAGCA
CGCTCGTCGTAAGACTGTCACCGCCATGGATGTTGTTTATGCTTTGAAGA
GGCAGGGCAGGACCCTTTACGGTTTTCGGTGGGTAATTTAAGGNTTTCTT
AATTTTTATGTTTTGAATGCTTATGGAGATCTGATGACTTTGGAATTTGG
GATGAAATTTGGCCTTCAAAGGAATTTTATGTTAATGTTGCTAAANNAAA
AANNANNANAAAANAAANNNNNAANNNNNGGGGGGGGGCCGCTTCAAAGA
GACCAACTTTACTACGGGGGGTGGGGAACGATAAATCTTTCAAAAGGGGC
CCAAATTTAATTCTGGGGGGGCGGTTTTAAAAGCGGGGGATGGGAGAACC
CGGGGGGTCACCCATTTAATCCCTTGGGGCACACCCCCTTTTCCCCGGGG
GGGGAAAAAAAAAAAGAGCCCCCCCAATTCCCCCCTTCAAAAATGGGCCC
CCTTAGGGGAGAAGAGGCGCCCCCTTTGGGGGGATTATTTAAGGGGGGGG
GGGGGGGTTCCCCCGGGGCCCCTCCCCTCCCTCCCC
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