EY756440

Overview
NameEY756440
Unique NameEY756440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_ASEAQ (Histone H4 OS=Asellus aquaticus GN=His4 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_ACRAS (Histone H4 OS=Acrolepiopsis assectella GN=His4 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_DENKL (Histone H4 OS=Dendronephthya klunzingeri GN=H4DEKL PE=3 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.432e-37
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_ACRFO (Histone H4 OS=Acropora formosa PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.432e-37
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            +LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 ILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H43_MAIZE (Histone H4.3 OS=Zea mays GN=H4 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 3.177e-37
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGV KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVRKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_STYPL (Histone H4 OS=Styela plicata PE=3 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 4.149e-37
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTA+DVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTALDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_PYRSA (Histone H4 OS=Pyrenomonas salina PE=3 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 4.149e-37
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_OIKDI (Histone H4 OS=Oikopleura dioica GN=H4.1 PE=3 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 4.149e-37
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTA+DVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTALDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_STRPU (Histone H4 OS=Strongylocentrotus purpuratus PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 9.242e-37
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTY EHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGF 101
[Close]
BLAST of EY756440 vs. ExPASy Swiss-Prot
Match: H4_PYCHE (Histone H4 OS=Pycnopodia helianthoides PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 9.242e-37
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 2 
Query:  137 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGF 376
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTY EHA+RKTVTAMDVVYALKRQGRTLYGF
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKRQGRTLYGF 101
The following BLAST results are available for this feature:
BLAST of EY756440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_ASEAQ1.862e-3797.50Histone H4 OS=Asellus aquaticus GN=His4 PE=3 SV=2[more]
H4_ACRAS1.862e-3797.50Histone H4 OS=Acrolepiopsis assectella GN=His4 PE=... [more]
H4_DENKL2.432e-3796.25Histone H4 OS=Dendronephthya klunzingeri GN=H4DEKL... [more]
H4_ACRFO2.432e-3796.25Histone H4 OS=Acropora formosa PE=3 SV=2[more]
H43_MAIZE3.177e-3798.75Histone H4.3 OS=Zea mays GN=H4 PE=1 SV=3[more]
H4_STYPL4.149e-3796.25Histone H4 OS=Styela plicata PE=3 SV=3[more]
H4_PYRSA4.149e-3797.50Histone H4 OS=Pyrenomonas salina PE=3 SV=3[more]
H4_OIKDI4.149e-3796.25Histone H4 OS=Oikopleura dioica GN=H4.1 PE=3 SV=3[more]
H4_STRPU9.242e-3796.25Histone H4 OS=Strongylocentrotus purpuratus PE=3 S... [more]
H4_PYCHE9.242e-3796.25Histone H4 OS=Pycnopodia helianthoides PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756440 ID=EY756440; Name=EY756440; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGAGCAAATAAAAGAAGCATAAAATTAAAGAACTGAAAAGA
GAGAAAAGGAAAGCAGAAGAGAAATGTCAGGAAGAGGAAAGGGAGGCAAA
GGATTAGGAAAGGGAGGAGCGAAGAGGCACCGCAAGGTGCTGAGGGATAA
CATTCAGGGGATCACAAAGCCGGCTATCCGGCGGCTGGCGAGGCGTGGCG
GAGTCAAGCGTATCAGCGGTCTGATTTACGAGGAGACTCGCGGGGTTTTA
AAGATCTTTTTGGAGAACGTGATTCGTGATGCTGTGACTTACACTGAGCA
CGCTCGTCGTAAGACTGTCACCGCCATGGATGTTGTTTATGCTTTGAAGA
GGCAGGGCAGGACCCTTTACGGTTTTCGGTGGGTAATTTAAGGNTTTCTT
AATTTTTATGTTTTGAATGCTTATGGAGATCTGATGACTTTGGAATTTGG
GATGAAATTTGGCCTTCAAAGGAATTTTATGTTAATGTTGCTAAANNAAA
AANNANNANAAAANAAANNNNNAANNNNNGGGGGGGGGCCGCTTCAAAGA
GACCAACTTTACTACGGGGGGTGGGGAACGATAAATCTTTCAAAAGGGGC
CCAAATTTAATTCTGGGGGGGCGGTTTTAAAAGCGGGGGATGGGAGAACC
CGGGGGGTCACCCATTTAATCCCTTGGGGCACACCCCCTTTTCCCCGGGG
GGGGAAAAAAAAAAAGAGCCCCCCCAATTCCCCCCTTCAAAAATGGGCCC
CCTTAGGGGAGAAGAGGCGCCCCCTTTGGGGGGATTATTTAAGGGGGGGG
GGGGGGGTTCCCCCGGGGCCCCTCCCCTCCCTCCCC
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